Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq321 336 7e-88 >seq321 Length=132638 Score = 336 bits (372), Expect = 7e-88 Identities = 426/581 (73%), Gaps = 6/581 (1%) Strand=Plus/Plus Query 36165 ACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAGCTAGCATACTGG 36224 || ||||||||||||| ||||| |||| || || || || |||||||| ||| Sbjct 86442 ACAGGCCAAGCAGCCAAAAAGAAGTGTAGGGAACGAGAGTTGTTGAAACTAGCATATTGG 86501 Query 36225 AAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTCTCTTCTTCTTGG 36284 ||||| | || ||||| || |||||||| || || || || || || ||||| ||||| Sbjct 86502 AAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTGTAAGTTTCTTCCTCTTGA 86561 Query 36285 CCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGAAT--AAGT-GAG 36341 |||||| | || || | || |||||| | || ||||| | || || | ||| Sbjct 86562 CCGAATCTGTAACCTTCATTAGCAGATTCGTTTTCTGTGGTTTCCCTGATCAAACTAGAG 86621 Query 36342 GAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACA 36401 | || |||| || ||||||||| ||||| | || |||||||| || || || Sbjct 86622 GT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCGCCGAATACACCAGCTACT 86678 Query 36402 CCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAA 36461 || | ||| ||||| |||||||||||||| ||||| || ||||| || |||| ||| || Sbjct 86679 CCTAACATGTGGAATGGATGCATAAGGATGTTGTGCTCCGCCTGGAATACAATCATGAAG 86738 Query 36462 TTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGG 36521 |||||||| ||||| || || | ||||||||||||||| ||||| ||||| || | |||| Sbjct 86739 TTGAAAGTACCTGATATTCCTAAAGGCATACCATCAGAAAAACTTCCTTGACCGATAGGG 86798 Query 36522 TAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACACATATCCAC 36581 |||| ||||| |||||| || ||||||||||| |||||||| || ||| ||||| Sbjct 86799 TAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAA 86858 Query 36582 GGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCTGAGATACCA 36641 || | |||||| || | ||||||||||||| | || |||| |||| | | |||| Sbjct 86859 GGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCA 86918 Query 36642 ATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGG 36701 | | ||||| | ||||| |||| ||| || || || || ||||||||||| || | Sbjct 86919 AGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCATTGTATAACCACTCATCAACA 86978 Query 36702 GTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGC 36742 | ||| ||||||||||| |||||||| || | ||| || || Sbjct 86979 GATGCTGCTTCCCAGATCGGGTAGAAATGCAAACCTATAGC 87019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150452799165184