Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_019444.1 Length=176043 Score E Sequences producing significant alignments: (Bits) Value seq321 347 1e-90 >seq321 Length=132638 Score = 347 bits (384), Expect = 1e-90 Identities = 457/632 (72%), Gaps = 1/632 (0%) Strand=Plus/Minus Query 163073 TCATC-TCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATC 163131 ||||| |||||||| || |||| |||| || || ||| | || ||||| || ||| Sbjct 87052 TCATCCTCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTCTACCCGATC 86993 Query 163132 TGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTC 163191 |||||||| ||||| ||||||||||| | || || || ||||||| |||| | || Sbjct 86992 TGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTAATTGTT 86933 Query 163192 TTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAATGGGAACTTTCATATCGC 163251 | |||||| | | || | | || ||||| ||||| ||||||||| | || Sbjct 86932 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGT 86873 Query 163252 TTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCACCTGTTGCAGCAGCATCCGCA 163311 | |||||||| || ||||| ||| ||||| || || ||||||||||| || | || Sbjct 86872 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 86813 Query 163312 GTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCATC 163371 || ||| || |||| ||| |||||||||| ||| ||||| | ||||| | || || Sbjct 86812 GTTTTCTTGATCTACCCTATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTTTAGGAATA 86753 Query 163372 TCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCC 163431 || || || ||||||| |||| |||| ||||| || |||||||||||||| ||||| || Sbjct 86752 TCAGGTACTTTCAACTTCATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCCA 86693 Query 163432 TTCCATATGTTGGGAGTCGCTGGTGTCTTCGGTGGATCACTCTTCTCGGCAATGCATGGC 163491 ||||| ||||| ||||| |||||||| ||||| || || || ||| || |||||||| Sbjct 86692 TTCCACATGTTAGGAGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGT 86633 Query 163492 AGTCTTGTTACCTCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAAAACTATGGT 163551 | || |||||| | || | || || || |||| || || || | ||| Sbjct 86632 TCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAACGAATCTGCTAATGAAGGT 86573 Query 163552 TACAAGTTTGGTCAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGGT 163611 |||| || |||||||| ||||| || ||||| ||||| || || ||||| || || || Sbjct 86572 TACAGATTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCTCATGGTTATTTTGGC 86513 Query 163612 CGTTTGATCTTCCAATATGCATCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTGGCA 163671 || ||||||||||||||||| ||||||||| | || |||||||| |||| Sbjct 86512 CGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCCCTACACTTCTTTTTGGCT 86453 Query 163672 GCATGGCCTGTCGTCGGAATCTGGTTTACTGC 163703 || |||||||| || || |||||||| ||||| Sbjct 86452 GCTTGGCCTGTAGTAGGTATCTGGTTCACTGC 86421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563203292052480