Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq321 360 6e-95 >seq321 Length=132638 Score = 360 bits (398), Expect = 6e-95 Identities = 432/587 (74%), Gaps = 0/587 (0%) Strand=Plus/Plus Query 21642 GCAGCAAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAA 21701 |||| ||||| |||||||| |||||||| ||||| | |||||| || || ||| || Sbjct 86421 GCAGTGAACCAGATACCTACTACAGGCCAAGCAGCCAAAAAGAAGTGTAGGGAACGAGAG 86480 Query 21702 TTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATA 21761 || || || ||||||||||||||||| | || |||||||| || |||||||| || ||| Sbjct 86481 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATA 86540 Query 21762 TTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTC 21821 |||||||| |||||||||||||| || ||||||| | || || | | ||| || Sbjct 86541 TTGTAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCGTTTTCTGTG 86600 Query 21822 GTCTCACGAATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCA 21881 || || | || | || || |||| | ||| ||||||||| ||| | || Sbjct 86601 GTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCG 86660 Query 21882 CCAAATACGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCC 21941 || ||||| || || || || | |||||| || ||||||||||| || |||||||| ||| Sbjct 86661 CCGAATACACCAGCTACTCCTAACATGTGGAATGGATGCATAAGGATGTTGTGCTCCGCC 86720 Query 21942 TGGAACACCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAA 22001 ||||| || | |||| ||||||| || || ||||| || || |||||| ||||||||||| Sbjct 86721 TGGAATACAATCATGAAGTTGAAAGTACCTGATATTCCTAAAGGCATACCATCAGAAAAA 86780 Query 22002 GAGCCCTGTCCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAG 22061 || || || | || || | | ||| |||||||| ||||| || |||||||| || Sbjct 86781 CTTCCTTGACCGATAGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAA 86840 Query 22062 TACGCAACAAAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCC 22121 || |||||| ||||| || | ||| || || || | |||||||||||||| || ||| Sbjct 86841 TATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 86900 Query 22122 ATGTAAGCAAAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTG 22181 |||||| | || |||| | |||||| | || | |||| | |||||||| ||| Sbjct 86901 ATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCATTG 86960 Query 22182 TACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTG 22228 || | ||| ||||||| | || |||||||| || |||||||| || Sbjct 86961 TATAACCACTCATCAACAGATGCTGCTTCCCAGATCGGGTAGAAATG 87007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146206444346880