Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq321 408 6e-109 >seq321 Length=132638 Score = 408 bits (452), Expect = 6e-109 Identities = 466/626 (74%), Gaps = 0/626 (0%) Strand=Plus/Plus Query 26905 GCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAG 26964 || ||||||||||| || || || ||||| ||||| | |||||||| | |||||| ||| Sbjct 86421 GCAGTGAACCAGATACCTACTACAGGCCAAGCAGCCAAAAAGAAGTGTAGGGAACGAGAG 86480 Query 26965 TTGTTGAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATG 27024 |||||||| |||||||||||||||||| || || || || ||||| || || ||||| Sbjct 86481 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATA 86540 Query 27025 TTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTC 27084 ||||| || ||||| ||||||||||| | ||||| | || || || |||| || Sbjct 86541 TTGTAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCGTTTTCTGTG 86600 Query 27085 GTCTCACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCA 27144 || || | || | ||| || |||| || ||||||||| ||| || || || Sbjct 86601 GTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCG 86660 Query 27145 CCGAATACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCC 27204 |||||||| ||||| || || | ||||||||| || ||||||||||| ||||| || ||| Sbjct 86661 CCGAATACACCAGCTACTCCTAACATGTGGAATGGATGCATAAGGATGTTGTGCTCCGCC 86720 Query 27205 TGGAATACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAA 27264 |||||||||| |||| |||| |||||||| || || || | ||||||| |||| || ||| Sbjct 86721 TGGAATACAATCATGAAGTTGAAAGTACCTGATATTCCTAAAGGCATACCATCAGAAAAA 86780 Query 27265 GAACCTTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAA 27324 |||||||||| ||| |||| | ||| || ||| | ||||| || || ||||| ||| Sbjct 86781 CTTCCTTGACCGATAGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAA 86840 Query 27325 TATGCTACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCC 27384 ||||| ||| ||||| ||||||||||| | ||| | |||||||||||||| ||| Sbjct 86841 TATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 86900 Query 27385 ATATAAGCATAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTA 27444 || ||| | | || | | |||||| | || | |||| ||||||| || || Sbjct 86901 ATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCATTG 86960 Query 27445 TACAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCA 27504 || ||||||||||| | ||||||||||||||||| |||||||| || | ||| || || Sbjct 86961 TATAACCACTCATCAACAGATGCTGCTTCCCAGATCGGGTAGAAATGCAAACCTATAGCT 87020 Query 27505 TTTGAACTTGGGACAACTGCACCAGA 27530 ||| | || | || |||||||| Sbjct 87021 GCAGAAGTAGGAATAATCGCACCAGA 87046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665486946462720