Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq321 360 6e-95 >seq321 Length=132638 Score = 360 bits (398), Expect = 6e-95 Identities = 432/587 (74%), Gaps = 0/587 (0%) Strand=Plus/Minus Query 41459 CACTTCTACCCAATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCA 41518 || |||||||| || |||||||| || | ||||||| ||| | ||||| |||||||| Sbjct 87007 CATTTCTACCCGATCTGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCT 86948 Query 41519 TTCCAACTCACCGTATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGG 41578 | |||| | || | |||||| | |||| || | ||||||||| || |||||| Sbjct 86947 TATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 86888 Query 41579 GAACTTAGCTATCGACTAGGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTC 41638 |||||||| | || || || ||| | || ||||| |||||| || || |||||||| Sbjct 86887 GAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTT 86828 Query 41639 GCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCT 41698 || ||||| |||||||| ||| | | || || | || || || ||||||||||| | Sbjct 86827 GCAGCTGCTACTGCTGTTTTCTTGATCTACCCTATCGGTCAAGGAAGTTTTTCTGATGGT 86768 Query 41699 ATGCCCTTGGGGATATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAAT 41758 ||||| || || ||||| || || ||||||| |||| | || |||||||| |||||||| Sbjct 86767 ATGCCTTTAGGAATATCAGGTACTTTCAACTTCATGATTGTATTCCAGGCGGAGCACAAC 86708 Query 41759 ATTCTTATGCATCCTTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTC 41818 || ||||||||||| || |||||| | || || || || ||||| || || | ||| Sbjct 86707 ATCCTTATGCATCCATTCCACATGTTAGGAGTAGCTGGTGTATTCGGCGGTTCCCTATTC 86648 Query 41819 TCTGCTATGCACGGTAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTT 41878 ||||||||| ||| | |||| || || | || | || || || ||| | | Sbjct 86647 AGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAACGAA 86588 Query 41879 TCACAGAACTATGGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCT 41938 || || | ||||||| || |||||||||||||| ||||||||||| || |||||| Sbjct 86587 TCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCT 86528 Query 41939 CACGGCTATTTTGGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTT 41998 || || |||||||| || | ||||||||||||||||| || || || || ||| || Sbjct 86527 CATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCCCTA 86468 Query 41999 CATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGC 42045 || |||||| | ||||| |||||||| |||||||| ||||| |||| Sbjct 86467 CACTTCTTTTTGGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGC 86421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146212844278784