Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq321 282 1e-71 >seq321 Length=132638 Score = 282 bits (312), Expect = 1e-71 Identities = 420/596 (70%), Gaps = 0/596 (0%) Strand=Plus/Plus Query 26039 ATACCCATAGATGTCAGCCATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGA 26098 ||||| | || || | ||| || || || || ||||||| ||| | |||||| || || Sbjct 86412 ATACCTAAAGCAGTGAACCAGATACCTACTACAGGCCAAGCAGCCAAAAAGAAGTGTAGG 86471 Query 26099 GAACGGCTGTTATTAAAACTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCA 26158 ||||| ||| || ||||| ||||| || || || |||| ||||| || || || ||| Sbjct 86472 GAACGAGAGTTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCA 86531 Query 26159 GCGACAATATTATATGTCTCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACT 26218 || || ||||| || || ||||| ||||| || || | || || | ||| || | Sbjct 86532 GCTACGATATTGTAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCG 86591 Query 26219 TCCTCTGTCGTTTCTGCAATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAA 26278 | ||||| ||||| || | || || ||||| || ||||||||| ||| Sbjct 86592 TTTTCTGTGGTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAAT 86651 Query 26279 AGAGCTCCACCGAAAACCCCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTA 26338 || | || ||||| || ||||| || || ||| |||||||| ||||| || || || Sbjct 86652 AGGGAACCGCCGAATACACCAGCTACTCCTAACATGTGGAATGGATGCATAAGGATGTTG 86711 Query 26339 TGTTCTGCTTGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCA 26398 || || || |||||||| | ||| ||||| |||||||| || || || | |||||| ||| Sbjct 86712 TGCTCCGCCTGGAATACAATCATGAAGTTGAAAGTACCTGATATTCCTAAAGGCATACCA 86771 Query 26399 TCACTAAAACTCCCTTGTCCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGT 26458 ||| |||||| ||||| |||| ||| || | ||||| || || ||| || | | Sbjct 86772 TCAGAAAAACTTCCTTGACCGATAGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACA 86831 Query 26459 GGTGCTGTATATGCAACAAATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCAC 26518 || |||| |||||||||| ||||| || | ||| || || | | || ||||||||| Sbjct 86832 GGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCAC 86891 Query 26519 TGTCTCCCTGCATATGCTGCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGT 26578 | | || || ||||| || | ||||||||| | | ||| |||| ||| || Sbjct 86892 TCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGA 86951 Query 26579 CCGCCATTGTATAGCCACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATG 26634 ||||||||||||| |||||| || | | | ||||||||||||||||| ||||| Sbjct 86952 CCGCCATTGTATAACCACTCATCAACAGATGCTGCTTCCCAGATCGGGTAGAAATG 87007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147710428344320