Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq321 410 1e-109 >seq321 Length=132638 Score = 410 bits (454), Expect = 1e-109 Identities = 473/633 (75%), Gaps = 3/633 (0%) Strand=Plus/Minus Query 157761 TCATC-TCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATC 157819 ||||| |||||||| || | || |||| || || ||| | || ||||| || ||| Sbjct 87052 TCATCCTCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTCTACCCGATC 86993 Query 157820 TGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTA 157879 |||||||| ||||| ||||||||||| | || || || ||||||| |||| | || Sbjct 86992 TGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTAATTGTT 86933 Query 157880 TTTCACTTCCTCATTGGTATCTATGCATACATGGGACGTGAGTGGGAACTTTCATACCGT 157939 | |||||| | ||||| | | |||||||| ||||||||||||||| | |||| Sbjct 86932 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGT 86873 Query 157940 TTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGCT 157999 | |||||||| || ||||| ||| |||||||| ||||| || || || || ||||| Sbjct 86872 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 86813 Query 158000 GTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATC 158059 || ||| | |||| ||| |||||||||| ||| || |||| ||||||| | || || Sbjct 86812 GTTTTCTTGATCTACCCTATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTTTAGGAATA 86753 Query 158060 TCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCG 158119 || |||||||| |||| |||| |||||||||| || || ||||||||||||||||| || Sbjct 86752 TCAGGTACTTTCAACTTCATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCCA 86693 Query 158120 TTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGA 158179 ||||| ||| | || || ||||| |||||||| || || || ||| ||||||||| || Sbjct 86692 TTCCACATGTTAGGAGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGT 86633 Query 158180 AGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTACGG 158238 | || || | || | | || | ||||| || |||| || || || | || Sbjct 86632 TCCTTGGTAACCT-CTAGTTTGATCAGGGAAACCACAGAAAACGAATCTGCTAATGAAGG 86574 Query 158239 TTACAAGTTCGGTCAAGAGGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCGG 158298 ||||| ||||||||||||||||| || || || ||||| || || ||||| || || || Sbjct 86573 TTACAGATTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCTCATGGTTATTTTGG 86514 Query 158299 TCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGC 158358 || |||||||||||||| ||| ||||||||||| |||||| | |||||||| | || Sbjct 86513 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCCCTACACTTCTTTTTGGC 86454 Query 158359 TGCATGGCCTGTTGTCGGCATCTGGTTCACCGC 158391 ||| |||||||| || || ||||||||||| || Sbjct 86453 TGCTTGGCCTGTAGTAGGTATCTGGTTCACTGC 86421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548368258206720