Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq321 455 4e-123 >seq321 Length=132638 Score = 455 bits (504), Expect = 4e-123 Identities = 483/633 (76%), Gaps = 3/633 (0%) Strand=Plus/Minus Query 151020 TCATC-TCTGGTGCTGTTGTTCCTTCTTCTAACGCTATCGGTCTGCACTTCTATCCCATC 151078 ||||| |||||||| || ||||| ||||| ||||| ||| |||| ||||| || ||| Sbjct 87052 TCATCCTCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTCTACCCGATC 86993 Query 151079 TGGGAAGCAGCCTCTCTCGATGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGTC 151138 ||||||||||| ||| | ||||| ||| | ||||| || ||||||| |||| |||| Sbjct 86992 TGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTAATTGTT 86933 Query 151139 TTCCACTTCCTGATTGGTATCTATGCTTACATGGGTCGTGAGTGGGAACTGTCTTACCGC 151198 | |||||| | ||||| | | |||||||||||||||||||||||| || ||| Sbjct 86932 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGT 86873 Query 151199 TTGGGTATGCGTCCCTGGATCTGC-GTTGCATACTCTGCTCCAGTTGCTGCTGCGAGTGC 151257 ||||||||||||| ||||| ||| |||||||| || ||||| ||||| ||||| | ||| Sbjct 86872 CTGGGTATGCGTCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 86814 Query 151258 AGTGTTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCCCTGGGTAT 151317 || ||| | |||| ||| |||||||||| ||| ||||||| ||||| | || || Sbjct 86813 TGTTTTCTTGATCTACCCTATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTTTAGGAAT 86754 Query 151318 TTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCACCC 151377 || || || ||||||| |||| |||| ||||| || ||||||||||| || ||||| || Sbjct 86753 ATCAGGTACTTTCAACTTCATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCC 86694 Query 151378 CTTCCATATGCTTGGTGTGGCTGGTGTCTTCGGTGGATCGCTCTTCTCGGCAATGCACGG 151437 ||||| ||| | || || |||||||| ||||| || || || ||| || ||||| || Sbjct 86693 ATTCCACATGTTAGGAGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 86634 Query 151438 TTCTCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAACGAGTCCCAGAACTATGG 151497 ||| |||| || ||| || | | || ||||| |||||||| || || | || Sbjct 86633 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAACGAATCTGCTAATGAAGG 86574 Query 151498 TTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCACACGGTTACTTTGG 151557 ||||| ||||||||||| ||||| || ||||| ||||| || || || ||||| ||||| Sbjct 86573 TTACAGATTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCTCATGGTTATTTTGG 86514 Query 151558 TCGTCTCATCTTCCAATACGCTTCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGC 151617 || | ||||||||||| ||| |||||||| || ||||| || |||||||| | || Sbjct 86513 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCCCTACACTTCTTTTTGGC 86454 Query 151618 AGCATGGCCTGTTGTCGGTATCTGGTTCACTGC 151650 || |||||||| || ||||||||||||||||| Sbjct 86453 TGCTTGGCCTGTAGTAGGTATCTGGTTCACTGC 86421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549616244229120