Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq321 387 4e-103 >seq321 Length=132638 Score = 387 bits (428), Expect = 4e-103 Identities = 446/595 (75%), Gaps = 4/595 (1%) Strand=Plus/Minus Query 19730 CACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCG 19789 || |||||||| || |||||||| || ||||||| ||| | ||||| || || || Sbjct 87007 CATTTCTACCCGATCTGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCT 86948 Query 19790 TTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGG 19849 | |||| | || | |||||| | |||| | | ||||||||| || |||||| Sbjct 86947 TATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 86888 Query 19850 GAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGGTT 19909 |||||||| | || || || ||| | ||||||||| |||||| || || ||||| ||| Sbjct 86887 GAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTT 86828 Query 19910 GCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGC 19968 ||||| || |||| || ||||| | ||||||| | ||||| || || || || |||| Sbjct 86827 GCAGCTGCTACTGCTGT-TTTCTTGATCTACCCTATCGGTCAAGGAAGTTTTTCTGATGG 86769 Query 19969 TATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAA 20028 ||||||||| || || || ||||| ||||||| |||| | |||||||| || || || || Sbjct 86768 TATGCCTTTAGGAATATCAGGTACTTTCAACTTCATGATTGTATTCCAGGCGGAGCACAA 86709 Query 20029 CATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATT 20088 ||| || ||||| || ||||||||| | || || |||||||||||||| || || ||||| Sbjct 86708 CATCCTTATGCATCCATTCCACATGTTAGGAGTAGCTGGTGTATTCGGCGGTTCCCTATT 86649 Query 20089 CAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAGACTACTGAACAGG 20147 |||||| ||||| ||||| |||| || || | ||| | | || || || ||| | | Sbjct 86648 CAGTGCTATGCATGGTTC-CTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAACG 86590 Query 20148 AAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCG 20207 || | || | ||||||| || || ||||| ||||| || || || |||||||| | Sbjct 86589 AATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTG 86530 Query 20208 CTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTC 20267 |||||||||| ||||| || |||||||||||||| ||| ||||||||| ||||| | Sbjct 86529 CTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCCC 86470 Query 20268 TACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGG 20322 |||||||||| | ||||| ||||| || ||||| || |||||| |||| || || Sbjct 86469 TACACTTCTTTTTGGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGG 86415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148827216461568