Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq321 365 1e-96 >seq321 Length=132638 Score = 365 bits (404), Expect = 1e-96 Identities = 439/594 (74%), Gaps = 2/594 (0%) Strand=Plus/Minus Query 28858 CACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCG 28917 || |||||||| || |||||||| || ||||||| ||| | ||||| || || || Sbjct 87007 CATTTCTACCCGATCTGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCT 86948 Query 28918 TTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGG 28977 | |||| | || | |||||| | |||| || | ||||||||| || |||||| Sbjct 86947 TATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 86888 Query 28978 GAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCGTC 29037 |||||||| | || || || ||| | || |||||| ||| ||||| |||||||| || Sbjct 86887 GAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTT 86828 Query 29038 GCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACGCG 29097 ||||| || |||| |||||| | ||||||| |||||||||| |||| || | Sbjct 86827 GCAGCTGCTACTGCTGTTTTCTTGATCTACCCTATCGGTCAAGGAAGTTTTTCTGATGGT 86768 Query 29098 ATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAAC 29157 |||||||| || || ||||| || ||||||| |||| | || ||||| || || || ||| Sbjct 86767 ATGCCTTTAGGAATATCAGGTACTTTCAACTTCATGATTGTATTCCAGGCGGAGCACAAC 86708 Query 29158 ATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTT 29217 || || ||||| || ||||||||| | || || ||||| || ||||| || || ||||| Sbjct 86707 ATCCTTATGCATCCATTCCACATGTTAGGAGTAGCTGGTGTATTCGGCGGTTCCCTATTC 86648 Query 29218 AGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTG-TGCGTGAGACGACTGAAGACAT 29276 ||||| ||||| ||||| | || || | || | ||| | | || || || ||| || Sbjct 86647 AGTGCTATGCATGGTTCCTTGGTAACCT-CTAGTTTGATCAGGGAAACCACAGAAAACGA 86589 Query 29277 CTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGC 29336 ||| || | ||||||| || || ||||| ||||| ||||| || |||||||| || Sbjct 86588 ATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGC 86529 Query 29337 TCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCT 29396 ||| ||||| ||||| || |||||||||||||||||| |||||| || ||||| || Sbjct 86528 TCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCCCT 86469 Query 29397 ACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGG 29450 ||||||||| | ||||| ||||| || ||||| || |||||| |||| || || Sbjct 86468 ACACTTCTTTTTGGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGG 86415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146664039478016