Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq321 367 4e-97 >seq321 Length=132638 Score = 367 bits (406), Expect = 4e-97 Identities = 432/582 (74%), Gaps = 2/582 (0%) Strand=Plus/Minus Query 18949 CACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCG 19008 || |||||||| || |||||||| || ||||||| ||| | ||||| || || || Sbjct 87007 CATTTCTACCCGATCTGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCT 86948 Query 19009 TTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGG 19068 | |||| | || | |||||| | |||| || | ||||||||| || |||||| Sbjct 86947 TATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 86888 Query 19069 GAACTTAGCTATCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTT 19128 |||||||| | || || || ||||| ||||||||| |||||| || |||||||||||| Sbjct 86887 GAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTT 86828 Query 19129 GCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCT 19188 || || || |||| || ||| | |||| || | |||||||| ||| || | | Sbjct 86827 GCAGCTGCTACTGCTGTTTTCTTGATCTACCCTATCGGTCAAGGAAGTTTTTCTGATGGT 86768 Query 19189 ATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAAC 19248 |||||||| || || ||||| ||||||| |||| ||||||||||||| || || ||| Sbjct 86767 ATGCCTTTAGGAATATCAGGTACTTTCAACTTCATGATTGTATTCCAGGCGGAGCACAAC 86708 Query 19249 ATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTT 19308 ||||| ||||| || ||||||||| | || || |||||||| |||||||| || ||||| Sbjct 86707 ATCCTTATGCATCCATTCCACATGTTAGGAGTAGCTGGTGTATTCGGCGGTTCCCTATTC 86648 Query 19309 AGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGT 19367 ||||| ||||| ||||| |||| || || | ||| | | ||||| || ||| | | Sbjct 86647 AGTGCTATGCATGGTTC-CTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAACGA 86589 Query 19368 ATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGC 19427 |||| || | || |||| || || ||||| ||||| ||||| || || || ||||| Sbjct 86588 ATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGC 86529 Query 19428 TCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCT 19487 |||||| |||||||| || | || ||||| || || |||||||| ||||| || Sbjct 86528 TCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCCCT 86469 Query 19488 ACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTT 19529 ||| ||||||||||||||||||||||| || || || ||||| Sbjct 86468 ACACTTCTTTTTGGCTGCTTGGCCTGTAGTAGGTATCTGGTT 86427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141147298176768