Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq321 428 6e-115 seq8 82.4 9e-11 >seq321 Length=132638 Score = 428 bits (474), Expect = 6e-115 Identities = 475/632 (75%), Gaps = 1/632 (0%) Strand=Plus/Minus Query 181162 TCATC-TCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATC 181220 ||||| |||||||| || |||| |||| || || ||| | || ||||| || ||| Sbjct 87052 TCATCCTCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTCTACCCGATC 86993 Query 181221 TGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTC 181280 |||||||| ||||| ||||||||||| | || || || ||||||| |||| | || Sbjct 86992 TGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTAATTGTT 86933 Query 181281 TTTCACTTCCTTATCGGCATTTATGCATACATGGGACGTGAATGGGAACTCTCTTACCGC 181340 | |||||| | | || | | |||||||| ||||| |||||||| || ||| Sbjct 86932 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGT 86873 Query 181341 TTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCAGCAGCATCTGCT 181400 | |||||||| || ||||| ||||||||| || ||||| || ||||| || ||||| Sbjct 86872 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 86813 Query 181401 GTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCATC 181460 || ||| | |||| ||| |||||||||| ||| ||||| | ||||| | || || Sbjct 86812 GTTTTCTTGATCTACCCTATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTTTAGGAATA 86753 Query 181461 TCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATTCTGATGCATCCC 181520 || ||||| ||||||| |||| |||| ||||| || ||||||||||| || |||||||| Sbjct 86752 TCAGGTACTTTCAACTTCATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCCA 86693 Query 181521 TTCCACATGTTGGGTGTCGCAGGTGTATTTGGTGGTTCACTGTTCAGTGCAATGCACGGT 181580 ||||||||||| || || || |||||||| || ||||| || |||||||| ||||| ||| Sbjct 86692 TTCCACATGTTAGGAGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGT 86633 Query 181581 TCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGGT 181640 || ||||| || ||| | || | || || || |||| || || || | ||| Sbjct 86632 TCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAACGAATCTGCTAATGAAGGT 86573 Query 181641 TACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCCGCCCACGGTTACTTTGGT 181700 |||| ||||| ||||| ||||| || ||||| ||||| || || || ||||| ||||| Sbjct 86572 TACAGATTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCTCATGGTTATTTTGGC 86513 Query 181701 CGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGCA 181760 || |||||||||||||||||| ||||||||||| ||||| || |||||||| | || Sbjct 86512 CGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCCCTACACTTCTTTTTGGCT 86453 Query 181761 GCATGGCCTGTAGTTGGAATCTGGTTCACCGC 181792 || ||||||||||| || ||||||||||| || Sbjct 86452 GCTTGGCCTGTAGTAGGTATCTGGTTCACTGC 86421 >seq8 Length=3569224 Score = 82.4 bits (90), Expect = 9e-11 Identities = 156/229 (68%), Gaps = 12/229 (5%) Strand=Plus/Plus Query 181512 ATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGTATTTGGTGGTTCACTGTTCAGTGCA 181571 |||||||| ||||||||||| || || || |||||| || || |||||||| Sbjct 2145667 ATGCATCCATTCCACATGTTAGGAGTAGCTAATGTATTC------TCCCTATTCAGTGCT 2145720 Query 181572 ATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAG 181631 ||||| | || ||||| || ||| | || | | ||| |||| ||| || Sbjct 2145721 ATGCATGATTTCTTGGTAACCTCTAGTTTTATCAAGAAAATGACAGAAAATGAATCTGCT 2145780 Query 181632 AACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCCGCCC----- 181686 || | ||||| | || || ||||| ||||| || ||||| ||||| || || | Sbjct 2145781 AATGAAGGTTATAGATTTGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCTCTGCTC 2145840 Query 181687 ACGGTTACTTTGGTCGCTTGATCTTCCAATATGCTTCATTCAACAACTC 181735 | |||| || | || |||||||| ||||||||| ||||||||||| Sbjct 2145841 ATGGTTG-TTCAGCCGATTGATCTTTCAATATGCTAGTTTCAACAACTC 2145888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614610716282880