Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 4e-11 >seq1 Length=14257138 Score = 82.4 bits (90), Expect = 4e-11 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 65090 GTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTGA 65149 |||||||| |||||||| ||| || | ||| || ||||| |||| ||||| ||| Sbjct 8321592 GTTCCAAATTGACCATTAGGCTGCAAAAGATTGATGTTGTTGCTGCCAACAAAATCTTGA 8321651 Query 65150 GCCATTCCGATAATTGCTGCAT-TTAAACTCGCTTCACCGTGATGATATCCTGAATGTTC 65208 |||||||| || |||| ||| | | ||| || || ||||| ||| ||||||| || Sbjct 8321652 GCCATTCCTATTATTG-TGCTTGCCAGACTTTGCTCTCCATGATGGTATGCTGAATGCTC 8321710 Query 65209 AGAGACATATCCACTAAATTGAGCAAC 65235 ||| ||||| || ||||||||||| Sbjct 8321711 AGACACATAACCTGAGAATTGAGCAAC 8321737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235677426374400