Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq321 374 1e-98 >seq321 Length=132638 Score = 374 bits (414), Expect = 1e-98 Identities = 435/587 (74%), Gaps = 0/587 (0%) Strand=Plus/Minus Query 176338 CACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGAGGACCA 176397 || |||||||| ||||||||||||||| | ||||| || ||| | |||||||| || || Sbjct 87007 CATTTCTACCCGATCTGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCT 86948 Query 176398 TACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATGGGACGCCAATGG 176457 || |||| |||| | |||||| | | ||| | | ||||||||| || | ||| Sbjct 86947 TATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 86888 Query 176458 GAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTA 176517 |||||||||| | | || || |||||||||||||| ||||||||| || || || || Sbjct 86887 GAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTT 86828 Query 176518 TCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGT 176577 | || || | || |||||| | |||| || ||||||||||| ||| ||||||||| Sbjct 86827 GCAGCTGCTACTGCTGTTTTCTTGATCTACCCTATCGGTCAAGGAAGTTTTTCTGATGGT 86768 Query 176578 ATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAAC 176637 |||||| | || || |||||||| |||||||| ||| |||||||||| || ||||||||| Sbjct 86767 ATGCCTTTAGGAATATCAGGTACTTTCAACTTCATGATTGTATTCCAGGCGGAGCACAAC 86708 Query 176638 ATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTC 176697 || || ||||| |||||||| ||| | |||||||| ||||| || || || || || ||| Sbjct 86707 ATCCTTATGCATCCATTCCACATGTTAGGAGTAGCTGGTGTATTCGGCGGTTCCCTATTC 86648 Query 176698 TCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACAACCGAAAACGAA 176757 || ||||| || | || || ||| | | || || || || ||||||||| Sbjct 86647 AGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAACGAA 86588 Query 176758 TCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCA 176817 || || | ||||||| |||||| ||||| ||||| || ||||| || |||||||| Sbjct 86587 TCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCT 86528 Query 176818 CACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAACTCAAGAAGTCTT 176877 || ||||| ||||| || | |||||||| |||||| |||||| ||||| | || Sbjct 86527 CATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCCCTA 86468 Query 176878 CACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGC 176924 |||||||| | || || | || || || | |||||||| ||||| Sbjct 86467 CACTTCTTTTTGGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGC 86421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603487640862720