Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq321 480 9e-131 >seq321 Length=132638 Score = 480 bits (532), Expect = 9e-131 Identities = 487/633 (77%), Gaps = 1/633 (0%) Strand=Plus/Minus Query 164109 TCATC-TCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCATC 164167 ||||| |||||||| |||| ||| ||||| ||||| ||| |||| |||||||| ||| Sbjct 87052 TCATCCTCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTCTACCCGATC 86993 Query 164168 TGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGTG 164227 |||||||||||| | | || || ||| | ||||| || ||||||| |||| |||| Sbjct 86992 TGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTAATTGTT 86933 Query 164228 TTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACCGT 164287 | |||||| | |||| | | ||||||||||||||||||||||||| || |||| Sbjct 86932 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGT 86873 Query 164288 CTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTGCA 164347 || |||||||||||||||||| || ||||| || |||||||| || || || | ||| Sbjct 86872 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 86813 Query 164348 GTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCATC 164407 || ||| || |||| ||| |||||||||| ||| ||||||| |||||| | || || Sbjct 86812 GTTTTCTTGATCTACCCTATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTTTAGGAATA 86753 Query 164408 TCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGCACCCC 164467 || || || ||||||| |||| | || |||||||| |||||||||||||| ||||| || Sbjct 86752 TCAGGTACTTTCAACTTCATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCCA 86693 Query 164468 TTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGT 164527 ||||| ||| | || ||||| ||||| || |||||||| || |||||||| ||||| ||| Sbjct 86692 TTCCACATGTTAGGAGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGT 86633 Query 164528 TCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTATGGT 164587 || |||| || ||| || | | || ||||| ||||| || || || | ||| Sbjct 86632 TCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAACGAATCTGCTAATGAAGGT 86573 Query 164588 TACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTTTGGT 164647 |||| || ||||| || |||||||| ||||| ||||| || ||||| ||||| ||||| Sbjct 86572 TACAGATTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCTCATGGTTATTTTGGC 86513 Query 164648 CGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCA 164707 || |||| |||||||| ||| ||||||||||| ||||| || |||||||| | || Sbjct 86512 CGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCCCTACACTTCTTTTTGGCT 86453 Query 164708 GCATGGCCTGTTGTCGGTATCTGGTTTACTGCT 164740 || |||||||| || ||||||||||| |||||| Sbjct 86452 GCTTGGCCTGTAGTAGGTATCTGGTTCACTGCT 86420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557648154270720