Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31]
896 sequences; 295,462,401 total letters
Query= NC_031935.1
Length=186386
Score E
Sequences producing significant alignments: (Bits) Value
seq321 473 1e-128
>seq321
Length=132638
Score = 473 bits (524), Expect = 1e-128
Identities = 495/644 (77%), Gaps = 7/644 (1%)
Strand=Plus/Minus
Query 177784 TCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCATCTGGGAA 177843
|||||||| || ||||| ||||| ||||| ||| | || ||||| || |||||||||
Sbjct 87046 TCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTCTACCCGATCTGGGAA 86987
Query 177844 GCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTATCTTCCAC 177903
||||| ||| | ||||||||| | |||||||| ||||||| |||| || | | |||
Sbjct 86986 GCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACAC 86927
Query 177904 TTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTTTCTTACCGCCTAGGT 177963
||| | | ||| | | |||||||||||||||||||||||| || ||| || |||
Sbjct 86926 TTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGT 86867
Query 177964 ATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCTGCTGTATTC 178023
|||||||| ||||| ||| ||||| || ||||| || || || || ||||||| |||
Sbjct 86866 ATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTC 86807
Query 178024 CTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGG--TATCAGTG 178081
| | || ||| |||||||||| ||| ||||| | |||||| | || ||||||
Sbjct 86806 TTGATCTACCCTATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTTTAGGAATATCAG-- 86749
Query 178082 GCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCC 178141
| || ||||||| |||| |||| ||||| || |||||||||||||| ||||| || ||||
Sbjct 86748 GTACTTTCAACTTCATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCCATTCC 86689
Query 178142 ACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGGTTCTC 178201
||||||| || || |||||||| || || ||||| || |||||||| ||||| |||||
Sbjct 86688 ACATGTTAGGAGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCT 86629
Query 178202 TGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTATGGTTAC 178260
|||| || || | | | | || | |||||||| || |||||| | || | ||||||
Sbjct 86628 TGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAACGAATCTGCTAATGAAGGTTAC 86570
Query 178261 AAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCGGTCGC 178320
| ||||||||||| ||||| || ||||| ||||| |||||||||||||| || || ||
Sbjct 86569 AGATTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCTCATGGTTATTTTGGCCGA 86510
Query 178321 CTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCA 178380
||||||||||||| || ||||||||||| ||||| || |||||||| | || ||
Sbjct 86509 TTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCCCTACACTTCTTTTTGGCTGCT 86450
Query 178381 TGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTT-AGCA 178423
|||||||| || |||||||||||||||||| | ||| || ||||
Sbjct 86449 TGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTGAGCA 86406
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596300521359360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |