Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq321 473 1e-128 >seq321 Length=132638 Score = 473 bits (524), Expect = 1e-128 Identities = 495/644 (77%), Gaps = 7/644 (1%) Strand=Plus/Minus Query 177784 TCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCATCTGGGAA 177843 |||||||| || ||||| ||||| ||||| ||| | || ||||| || ||||||||| Sbjct 87046 TCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTCTACCCGATCTGGGAA 86987 Query 177844 GCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTATCTTCCAC 177903 ||||| ||| | ||||||||| | |||||||| ||||||| |||| || | | ||| Sbjct 86986 GCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACAC 86927 Query 177904 TTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTTTCTTACCGCCTAGGT 177963 ||| | | ||| | | |||||||||||||||||||||||| || ||| || ||| Sbjct 86926 TTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGT 86867 Query 177964 ATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCTGCTGTATTC 178023 |||||||| ||||| ||| ||||| || ||||| || || || || ||||||| ||| Sbjct 86866 ATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTC 86807 Query 178024 CTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGG--TATCAGTG 178081 | | || ||| |||||||||| ||| ||||| | |||||| | || |||||| Sbjct 86806 TTGATCTACCCTATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTTTAGGAATATCAG-- 86749 Query 178082 GCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCC 178141 | || ||||||| |||| |||| ||||| || |||||||||||||| ||||| || |||| Sbjct 86748 GTACTTTCAACTTCATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCCATTCC 86689 Query 178142 ACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGGTTCTC 178201 ||||||| || || |||||||| || || ||||| || |||||||| ||||| ||||| Sbjct 86688 ACATGTTAGGAGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCT 86629 Query 178202 TGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTATGGTTAC 178260 |||| || || | | | | || | |||||||| || |||||| | || | |||||| Sbjct 86628 TGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAACGAATCTGCTAATGAAGGTTAC 86570 Query 178261 AAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCGGTCGC 178320 | ||||||||||| ||||| || ||||| ||||| |||||||||||||| || || || Sbjct 86569 AGATTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCTCATGGTTATTTTGGCCGA 86510 Query 178321 CTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCA 178380 ||||||||||||| || ||||||||||| ||||| || |||||||| | || || Sbjct 86509 TTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCCCTACACTTCTTTTTGGCTGCT 86450 Query 178381 TGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTT-AGCA 178423 |||||||| || |||||||||||||||||| | ||| || |||| Sbjct 86449 TGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTGAGCA 86406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596300521359360