Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zea_20mays_20[refseq_20GCF_5F000005005.2_202017-02-07] 267 sequences; 2,135,083,061 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq6 86.0 5e-12 >seq6 Length=174033170 Score = 86.0 bits (94), Expect = 5e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 19993 CCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA 20052 |||||| |||||| | ||||| || || || || ||||||||||| | | |||||| Sbjct 98731145 CCTCAAGACCAAAGGGAGTGTTGACTCCTTCTGAATGTTGTAATCAGCTAAAGTTTTCCC 98731204 Query 20053 ATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATC 20094 ||| |||||||| ||||| ||| |||| |||||||| || || Sbjct 98731205 ATCCTCCAATTGCTTGCCAGCAAAAATCAGCCTCTGGTGGTC 98731246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419585834637027