Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zea_20mays_20[refseq_20GCF_5F000005005.2_202017-02-07]
267 sequences; 2,135,083,061 total letters
Query= NC_006882.2
Length=45176
Score E
Sequences producing significant alignments: (Bits) Value
seq130 563 2e-156
seq267 549 6e-152
seq10 506 6e-139
seq5 450 4e-122
seq2 385 1e-102
seq3 176 1e-39
seq1 145 2e-30
seq4 87.8 5e-13
>seq130
Length=63567
Score = 563 bits (624), Expect = 2e-156
Identities = 712/976 (73%), Gaps = 2/976 (0%)
Strand=Plus/Minus
Query 19299 TGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCT 19358
||| | || || ||||| ||||| ||||| | || ||||| || || | ||||| |||
Sbjct 21922 TGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTGATGATCCCT 21863
Query 19359 TGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGAT 19418
|||| | | || ||| | ||||| ||||||| ||||| || || || ||||||
Sbjct 21862 ACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGAT 21803
Query 19419 ATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCT 19478
|| ||||| || |||||||| ||||| || || ||| | || |||||||||||||| |||
Sbjct 21802 ATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCT 21743
Query 19479 GGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCC 19538
|| || | |||| | || || || ||| |||| ||||| || || ||||||||
Sbjct 21742 GGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGCT 21683
Query 19539 GGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTC 19598
| || | ||||| ||||||||||| |||||||| ||| | || |||| | ||||||
Sbjct 21682 GCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTC 21623
Query 19599 TTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATG 19658
||| | || ||||| || ||| | |||||||||| || | | | || |||
Sbjct 21622 TTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATG 21563
Query 19659 AGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTC 19718
| || ||||| || |||||| |||| || | |||| ||| |||||| |||||
Sbjct 21562 CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTT 21504
Query 19719 G-TTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTAC 19777
| ||||||| |||| ||||| ||||| ||||||||||||| | || || ||||||||
Sbjct 21503 GATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTAC 21444
Query 19778 TTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACAT 19837
||| ||||||||| | |||||||| ||||| ||||| |||||||||||||| || |||||
Sbjct 21443 TTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTTCACAT 21384
Query 19838 GCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGT 19897
| | ||||| ||||| ||||||||||| || || ||| ||||||||| || |||||
Sbjct 21383 GTTAGGTGTAGCTGGTGTATTCGGTGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 21324
Query 19898 TACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTT 19957
|| || | |||| |||||| ||||| ||| || || | || || || ||
Sbjct 21323 AACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGGTTACAAATT 21264
Query 19958 CGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGAT 20017
|| || || |||||||| ||||||||||| ||||| ||||| || ||||| |||| ||
Sbjct 21263 TGGTCAGGAAGAAGAGACTTATAATATTGTGGCTGCTCACGGTTATTTTGGTCGATTAAT 21204
Query 20018 ATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCC 20077
|| ||||||||| |||||| ||||||||||||||||| ||||| | ||| ||| ||
Sbjct 21203 CTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCC 21144
Query 20078 CGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGG 20137
|| || || || ||| | || | | || || | |||||||| |||||||| |||||
Sbjct 21143 TGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAACCTAAATGG 21084
Query 20138 TTTTAACTTTAACCAGTCAGTAGTTGATGTCAACGGAAAGATAATCCCAACATGGGCTGA 20197
||| || || ||||| || ||||||||| | | || | || || ||||||||
Sbjct 21083 TTTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACTTGGGCTGA 21024
Query 20198 TGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCATAACTT 20257
| | | || | ||||| || || | || || |||||||| || |||||||| |||||
Sbjct 21023 TATCATCAACCGTGCTAATCTTGGTATGGAGGTAATGCACGAACGTAATGCTCACAACTT 20964
Query 20258 CCCACTTGATTTAGCT 20273
||| || || |||||
Sbjct 20963 CCCTCTAGACCTAGCT 20948
>seq267
Length=140384
Score = 549 bits (608), Expect = 6e-152
Identities = 709/976 (73%), Gaps = 2/976 (0%)
Strand=Plus/Minus
Query 19299 TGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCT 19358
||| | || || ||||| ||||| ||||| | || ||||| || || | ||||| |||
Sbjct 1093 TGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTGATGATCCCT 1034
Query 19359 TGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGAT 19418
|||| | | || ||| | ||||| ||||||| ||||| || || || ||||||
Sbjct 1033 ACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGAT 974
Query 19419 ATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCT 19478
|| ||||| || |||||||| ||||| || || ||| | || |||||||||||||| |||
Sbjct 973 ATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCT 914
Query 19479 GGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCC 19538
|| || | |||| | || || ||||| |||| ||||| || || ||||||||
Sbjct 913 GGTGCTATTATTCCTACTTCTGCGGCGATAGGGTTGCATTTTTACCCAATTTGGGAAGCT 854
Query 19539 GGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTC 19598
| || | ||||| ||||||||||| |||||||| ||| | || |||| | ||||||
Sbjct 853 GCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTC 794
Query 19599 TTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATG 19658
||| | || ||||| || ||| | |||||||||| || | | | || |||
Sbjct 793 TTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATG 734
Query 19659 AGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTC 19718
| || ||||| || |||||| |||| || | |||| ||| |||||| |||||
Sbjct 733 CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTT 675
Query 19719 G-TTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTAC 19777
| ||||||| |||| ||||| ||||| ||||||||||||| | || || ||||||||
Sbjct 674 GATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTAC 615
Query 19778 TTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACAT 19837
||| ||||||||| | |||||||| ||||| ||||| |||||||||||||| || |||||
Sbjct 614 TTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTTCACAT 555
Query 19838 GCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGT 19897
| | ||||| ||||| |||||||| || || || ||| ||||||||| || | ||
Sbjct 554 GTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCCTTGT 495
Query 19898 TACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTT 19957
|| || | |||| |||||| ||||| ||| || || | || || || ||
Sbjct 494 AACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGGTTACAAATT 435
Query 19958 CGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGAT 20017
|| || || |||||||| ||||||||||| ||||| ||||| || ||||| |||| ||
Sbjct 434 TGGTCAGGAAGAAGAGACTTATAATATTGTGGCTGCTCACGGTTATTTTGGTCGATTAAT 375
Query 20018 ATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCC 20077
|| ||||||||| |||||| ||||||||||||||||| ||||| | ||| ||| ||
Sbjct 374 CTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCC 315
Query 20078 CGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGG 20137
|| || || || ||| | || | | || || | |||||||| |||||||| |||||
Sbjct 314 TGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAACCTAAATGG 255
Query 20138 TTTTAACTTTAACCAGTCAGTAGTTGATGTCAACGGAAAGATAATCCCAACATGGGCTGA 20197
||| || || ||||| || ||||||||| | | || | || || ||||||||
Sbjct 254 TTTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACTTGGGCTGA 195
Query 20198 TGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCATAACTT 20257
| | | || | ||||| || || | || || |||||||| || |||||||| |||||
Sbjct 194 TATCATCAACCGTGCTAATCTTGGTATGGAGGTAATGCACGAACGTAATGCTCACAACTT 135
Query 20258 CCCACTTGATTTAGCT 20273
||| || || |||||
Sbjct 134 CCCTCTAGACCTAGCT 119
>seq10
Length=150982314
Score = 506 bits (560), Expect = 6e-139
Identities = 633/865 (73%), Gaps = 5/865 (1%)
Strand=Plus/Plus
Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469
|| |||||||| ||||| || |||||||| ||||| || || ||| | || |||||||||
Sbjct 100538513 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAAT 100538572
Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529
||||| ||||| || | |||| | || || || ||| |||| ||||| || ||
Sbjct 100538573 ATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATT 100538632
Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589
|||||||| | || | ||||| ||||||||||| |||||||| ||| | || ||||
Sbjct 100538633 TGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTT 100538692
Query 19590 TTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGA 19649
| ||||||||| | || ||||| || ||| | |||||||||| || | |
Sbjct 100538693 CTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 100538752
Query 19650 TTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCT 19709
| || ||| | || ||||| || |||||| |||| || | |||| ||| ||||
Sbjct 100538753 CTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 100538812
Query 19710 GTGTTTCTCG-TTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTAT 19768
|| ||||| | ||||||| |||| ||||| ||||| ||||||||||||| | || ||
Sbjct 100538813 GT-TTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 100538871
Query 19769 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCC 19828
||||||||||| ||||||||| | |||||||| ||||| ||||| ||||||||||||||
Sbjct 100538872 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCC 100538931
Query 19829 GTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 19888
|| |||||| | ||||| ||||| |||||||| || || || ||| ||||||||| ||
Sbjct 100538932 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 100538991
Query 19889 AAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGG 19948
||||| || || | |||| |||||| ||||| ||| || || | ||
Sbjct 100538992 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGG 100539051
Query 19949 CTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGG 20008
|| || || || || || |||||||| ||||||||||| ||||| ||||| || |||||
Sbjct 100539052 TTACAAATTTGGTCAGGAAGAAGAGACTTATAATATTGTGGCTGCTCACGGTTATTTTGG 100539111
Query 20009 GAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGC 20068
|||| || || ||||||||| |||||| ||||||||||||||||| |||| | ||
Sbjct 100539112 TCGATTAATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCT---TGGC 100539168
Query 20069 TACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAA 20128
| ||| || || || || || ||| | || | | || || | |||||||| |||||
Sbjct 100539169 TGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAA 100539228
Query 20129 CCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGATGTCAACGGAAAGATAATCCCAAC 20188
||| |||||||| || || ||||| || ||||||||| | | || | || ||
Sbjct 100539229 CCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTTGCGTTATTAATAC 100539288
Query 20189 ATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGC 20248
||||||||| | | || | ||||| || || | || || |||||||| || |||||
Sbjct 100539289 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAGGTAATGCACGAACGTAATGC 100539348
Query 20249 TCATAACTTCCCACTTGATTTAGCT 20273
||| |||||||| || || |||||
Sbjct 100539349 TCACAACTTCCCTCTAGACCTAGCT 100539373
>seq5
Length=223902240
Score = 450 bits (498), Expect = 4e-122
Identities = 617/858 (72%), Gaps = 3/858 (0%)
Strand=Plus/Minus
Query 19299 TGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCT 19358
||| | || || ||||| ||||| ||||| | || |||||| | || | ||||| |||
Sbjct 105587923 TGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTTTAGTGTTTTGATGATCCCT 105587864
Query 19359 TGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGAT 19418
|||| | | || ||| | ||||| ||||||| ||||| || || || ||||||
Sbjct 105587863 ACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGAT 105587804
Query 19419 ATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCT 19478
|| ||||| || |||||||| ||||| || || ||| | | |||||||||||||| |||
Sbjct 105587803 ATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTCATGGAAACAATATTATCTCT 105587744
Query 19479 GGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCC 19538
|| || | |||| | | || || ||| |||| ||||| || || ||||||||
Sbjct 105587743 GGTGCTATTATTCCTACTTTTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGCT 105587684
Query 19539 GGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTC 19598
| || | ||||| ||||||||||| || ||||| ||| | || || | | ||||||
Sbjct 105587683 GCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTATTCTACACTTC 105587624
Query 19599 TTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATG 19658
||| | || ||||| || ||| |||||||||| || | | | || |||
Sbjct 105587623 TTACTTGGTGTAGCTTGTTATATGGGTCATGAGTGGGAACTTAGTTTCTGTCTGGGTATG 105587564
Query 19659 AGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTC 19718
| || ||||| || |||||| |||| || | |||| ||| || ||| |||||
Sbjct 105587563 CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGTTGT-TTTCTT 105587505
Query 19719 G-TTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTAC 19777
| ||||||| |||| ||||| ||||| |||||| |||||| | || || ||| ||||
Sbjct 105587504 GATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGCATGCCTTTAGGAATATCTCGTAC 105587445
Query 19778 TTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACAT 19837
||| ||||||||| | |||||| | | ||| ||||| |||||||||||||| || |||||
Sbjct 105587444 TTTCAACTTTATGATTGTATTCTAGGTAGA-CACAACATCCTTATGCATCCATTTCACAT 105587386
Query 19838 GCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGT 19897
| | ||||| ||||| |||||||| || || || ||| ||||||||| || |||||
Sbjct 105587385 GTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 105587326
Query 19898 TACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTT 19957
|| || | ||| |||||| ||||| ||| | || | || || || ||
Sbjct 105587325 AACCTCTAGTTTGTTCAGGGAAACCACTGAAAATGAGTTTACTAATGAGGGTTACAAATT 105587266
Query 19958 CGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGAT 20017
|| || || ||||| || ||||||||||| ||||| ||||| || ||||| |||| ||
Sbjct 105587265 TGGTCAGGAAGAAGATACTTATAATATTGTGGCTGCTCACGGTTATTTTGGTCGATTAAT 105587206
Query 20018 ATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCC 20077
|| ||||||||| |||||| ||||||||||||||||| ||||| | ||| ||| ||
Sbjct 105587205 CTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTATTGGCTGCTTGGCC 105587146
Query 20078 CGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGG 20137
|| || || || ||| | || | | || || | |||||||| |||||||| |||||
Sbjct 105587145 TGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAACCTAAATGG 105587086
Query 20138 TTTTAACTTTAACCAGTC 20155
||| || || ||||| ||
Sbjct 105587085 TTTCAATTTCAACCAATC 105587068
Score = 138 bits (152), Expect = 3e-28
Identities = 127/161 (79%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 19767 ATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCAT 19826
|| ||||||||||| ||||||||| | |||||||| ||||| ||||| ||||||||||||
Sbjct 59277014 ATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCAT 59276955
Query 19827 CCGTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCAC 19886
|| || |||||| | ||||| ||||| |||||||| || || || ||| |||||||||
Sbjct 59276954 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCAT 59276895
Query 19887 GGAAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGA 19927
|| ||||| || || | |||| |||||| |||||
Sbjct 59276894 GGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGA 59276854
>seq2
Length=244442276
Score = 385 bits (426), Expect = 1e-102
Identities = 460/622 (74%), Gaps = 2/622 (0%)
Strand=Plus/Plus
Query 19653 GGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTG 19712
|| ||| | || ||||| || |||||| |||| || | |||| ||| ||||||
Sbjct 9669412 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT- 9669470
Query 19713 TTTCTCG-TTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTC 19771
||||| | ||||||| |||| ||||| ||||| ||||||||||||| | || || ||
Sbjct 9669471 TTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATC 9669530
Query 19772 TGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTT 19831
||||||||| ||||||||| | |||||||| ||||| ||||| |||||||||||||| ||
Sbjct 9669531 TGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATT 9669590
Query 19832 CCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAG 19891
|||||| | ||||| ||||| |||||||| || || || ||| ||||||||| ||
Sbjct 9669591 TCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTC 9669650
Query 19892 TTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTA 19951
||||| || || | |||| |||||| ||||| ||| || || | || ||
Sbjct 9669651 CTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGGTTA 9669710
Query 19952 TAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAG 20011
|| || || || || |||||||| ||||||||||| ||||| ||||| || ||||| |
Sbjct 9669711 CAAATTTGGTCAGGAAGAAGAGACTTATAATATTGTGGCTGCTCACGGTTATTTTGGTCG 9669770
Query 20012 ATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTAC 20071
||| || || ||||||||| |||||| ||||||||||||||||| ||||| | ||| |
Sbjct 9669771 ATTAATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTGGCTGC 9669830
Query 20072 TTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCT 20131
|| || || || || || ||| | || | | || || | |||||||| ||||||||
Sbjct 9669831 TTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAACCT 9669890
Query 20132 TAATGGTTTTAACTTTAACCAGTCAGTAGTTGATGTCAACGGAAAGATAATCCCAACATG 20191
|||||||| || || ||||| || ||||||||| | | || | || || ||
Sbjct 9669891 AAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACTTG 9669950
Query 20192 GGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCA 20251
||||||| | | || | ||||| || || | || || |||||||| || ||||||||
Sbjct 9669951 GGCTGATATCATCAACTGTGCTAATCTTGGTATGGAGGTAATGCACGAACGTAATGCTCA 9670010
Query 20252 TAACTTCCCACTTGATTTAGCT 20273
|||||||| || || |||||
Sbjct 9670011 CAACTTCCCTCTAGACCTAGCT 9670032
Score = 352 bits (390), Expect = 8e-93
Identities = 427/579 (74%), Gaps = 2/579 (0%)
Strand=Plus/Plus
Query 19696 CAGCAGCTCTTGCTGTGTTTCTCG-TTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGT 19754
|||| ||| |||||| ||||| | ||||||| |||| ||||| ||||| |||||||
Sbjct 98025294 CAGCTGCTACTGCTGT-TTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGT 98025352
Query 19755 ATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAAT 19814
|||||| | || || ||||| ||||| ||||||||| | |||||||| ||||| |||||
Sbjct 98025353 ATGCCTTTAGGAATATCTGGCACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAAC 98025412
Query 19815 ATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTC 19874
|||||||||||||| || |||||| | ||||| ||||| |||||||| || || || |||
Sbjct 98025413 ATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTC 98025472
Query 19875 TCTGCTATGCACGGAAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTA 19934
||||||||| || ||||| || || | |||| |||||| ||||| ||
Sbjct 98025473 AGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATTAG 98025532
Query 19935 TCGCAGAACTATGGCTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCA 19994
|| || | || || || || || || || |||||||| ||||||||||| |||||
Sbjct 98025533 TCTGCTAATGAGGGTTACAAATTTGGTCAGGAAGAAGAGACTTATAATATTGTGGCTGCT 98025592
Query 19995 CACGGGTACTTTGGGAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTA 20054
||||| || ||||| |||| || || ||||||||| |||||| ||||||| |||||||
Sbjct 98025593 CACGGTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAATTCTCATTCTTTA 98025652
Query 20055 CATTTCTTTCTTGCTACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGC 20114
|| ||||| | | | ||| || || || || || ||| | || | | || || |
Sbjct 98025653 CACTTCTTCTTGGTTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGT 98025712
Query 20115 ACTATGGCTTTCAACCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGATGTCAACGGA 20174
|||||||| |||||||| |||||||| || || ||||| || ||||||||| | | ||
Sbjct 98025713 ACTATGGCATTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGT 98025772
Query 20175 AAGATAATCCCAACATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATG 20234
| || || ||||||||| | | || | ||||| || || | || || |||
Sbjct 98025773 CGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAGGTAATG 98025832
Query 20235 CACGAGCGCAATGCTCATAACTTCCCACTTGATTTAGCT 20273
||||| || |||||| | |||||||| || || |||||
Sbjct 98025833 CACGAACGTAATGCTGACAACTTCCCTCTAGACCTAGCT 98025871
Score = 212 bits (234), Expect = 2e-50
Identities = 285/397 (72%), Gaps = 0/397 (0%)
Strand=Plus/Plus
Query 19877 TGCTATGCACGGAAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATC 19936
||||||||| || ||||| || || | |||| |||||| ||||| ||| ||
Sbjct 124744679 TGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTC 124744738
Query 19937 GCAGAACTATGGCTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACA 19996
|| | || || || || || || || |||||||| ||||||||||| ||||| ||
Sbjct 124744739 TGCTAATGAGGGTTACAAATTTGGTCAGGAAGAAGAGACTTATAATATTGTGGCTGCTCA 124744798
Query 19997 CGGGTACTTTGGGAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACA 20056
||| || ||||| |||| || || ||||||||| |||||| |||||||||||||||||
Sbjct 124744799 CGGTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACA 124744858
Query 20057 TTTCTTTCTTGCTACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCAC 20116
||||| | ||| ||| || || || || || ||| | || | | || || | ||
Sbjct 124744859 CTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTAC 124744918
Query 20117 TATGGCTTTCAACCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGATGTCAACGGAAA 20176
|||||| |||||||| |||||||| || || ||||| || ||||||||| | | ||
Sbjct 124744919 TATGGCATTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCG 124744978
Query 20177 GATAATCCCAACATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCA 20236
| || || ||||||||| | | || | ||||| || || | || || |||||
Sbjct 124744979 CGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAGGTAATGCA 124745038
Query 20237 CGAGCGCAATGCTCATAACTTCCCACTTGATTTAGCT 20273
||| || |||||||| |||||||| || || |||||
Sbjct 124745039 CGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCT 124745075
Score = 170 bits (188), Expect = 6e-38
Identities = 219/302 (73%), Gaps = 0/302 (0%)
Strand=Plus/Plus
Query 19299 TGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCT 19358
||| | || || ||||| ||||| ||||| | || ||||| || || | ||||| |||
Sbjct 98024985 TGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTGATGATCCCT 98025044
Query 19359 TGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGAT 19418
|||| | | || ||| | ||||| ||||||| ||||| || || || ||||||
Sbjct 98025045 ACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGAT 98025104
Query 19419 ATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCT 19478
|| ||||| || |||||||| ||||| || || ||| | | |||||||||||||| |||
Sbjct 98025105 ATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTCATGGAAACAATATTATCTCT 98025164
Query 19479 GGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCC 19538
| || | |||| | || || || ||| |||| ||||| || || ||||||||
Sbjct 98025165 GATGCTATTATTCCTACTTCTGTGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGCT 98025224
Query 19539 GGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTC 19598
| || | ||||| ||||||||||| |||||||| ||| | || |||| | ||||||
Sbjct 98025225 GCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTC 98025284
Query 19599 TT 19600
||
Sbjct 98025285 TT 98025286
>seq3
Length=235667834
Score = 176 bits (194), Expect = 1e-39
Identities = 217/297 (73%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 19305 ACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCTTGCTTA 19364
|| || ||||| ||||| ||||| | || |||||||| || | ||||| ||| ||||
Sbjct 47453635 ACTAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTA 47453576
Query 19365 CTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGATATAGAT 19424
| | | ||| | | ||| ||||||| ||||| || || || |||||||| |||
Sbjct 47453575 TTGACCACAACTTCCGTATATATTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGAT 47453516
Query 19425 GGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCTGGAGCA 19484
|| || |||||||| ||||| || || ||| | || |||||||||||||| ||||| ||
Sbjct 47453515 GGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCT 47453456
Query 19485 GTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCCGGCACT 19544
| |||| | || || || ||| |||| ||||| || || |||||||| | ||
Sbjct 47453455 ATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCT 47453396
Query 19545 TTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTCTTA 19601
| ||||| ||||||||||| |||||||| ||| | || |||| | |||||||||
Sbjct 47453395 GTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTA 47453339
Score = 176 bits (194), Expect = 1e-39
Identities = 217/297 (73%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 19305 ACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCTTGCTTA 19364
|| || ||||| ||||| ||||| | || |||||||| || | ||||| ||| ||||
Sbjct 47459937 ACTAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTA 47459878
Query 19365 CTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGATATAGAT 19424
| | | ||| | | ||| ||||||| ||||| || || || |||||||| |||
Sbjct 47459877 TTGACCACAACTTCCGTATATATTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGAT 47459818
Query 19425 GGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCTGGAGCA 19484
|| || |||||||| ||||| || || ||| | || |||||||||||||| ||||| ||
Sbjct 47459817 GGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCT 47459758
Query 19485 GTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCCGGCACT 19544
| |||| | || || || ||| |||| ||||| || || |||||||| | ||
Sbjct 47459757 ATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCT 47459698
Query 19545 TTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTCTTA 19601
| ||||| ||||||||||| |||||||| ||| | || |||| | |||||||||
Sbjct 47459697 GTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTA 47459641
Score = 172 bits (190), Expect = 2e-38
Identities = 220/303 (73%), Gaps = 0/303 (0%)
Strand=Plus/Minus
Query 19299 TGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCT 19358
||| | || || ||||| ||||| ||||| | || |||||||| || | ||||| |||
Sbjct 47466248 TGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 47466189
Query 19359 TGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGAT 19418
|||| | | | ||| | | ||| ||||||| ||||| || || || ||||||
Sbjct 47466188 ACCTTATTGACCACAACTTCCGTATATATTATCGCCTTCATCGCTGCTCCTCCAGTAGAT 47466129
Query 19419 ATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCT 19478
|| ||||| || |||||||| ||||| || || ||| | || |||||||||||||| |||
Sbjct 47466128 ATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCT 47466069
Query 19479 GGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCC 19538
| || | |||| | || || || ||| |||| ||||| || || ||||||||
Sbjct 47466068 GATGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGCT 47466009
Query 19539 GGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTC 19598
| || | ||||| ||||||||||| |||||||| ||| | || |||| | ||||||
Sbjct 47466008 GCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTC 47465949
Query 19599 TTA 19601
|||
Sbjct 47465948 TTA 47465946
>seq1
Length=307041717
Score = 145 bits (160), Expect = 2e-30
Identities = 199/278 (72%), Gaps = 0/278 (0%)
Strand=Plus/Minus
Query 19300 GGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCTT 19359
|||| | || ||||| ||||| ||||| | || ||||| || || | ||||| |||
Sbjct 285225182 GGGTGGCCAGCACCGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTGATGATCCCTA 285225123
Query 19360 GCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGATA 19419
|||| | | | ||| | ||||| ||||||| ||||| || || || |||||||
Sbjct 285225122 CCTTATTGACCACAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGATA 285225063
Query 19420 TAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCTG 19479
| ||||| || | |||||| ||||| || || ||| | || |||||||||||||| ||||
Sbjct 285225062 TTGATGGTATTCATGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCTG 285225003
Query 19480 GAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCCG 19539
| || | || | | || || || ||| || | ||||| || || |||||||| |
Sbjct 285225002 GTGCTATTATTTCTACTTCTGCGGCGATCGGATTGTATTTTTACCCAATTTGGGAAGCTG 285224943
Query 19540 GCACTTTAGATGAGTGGTTATACAACGGCGGTCCATAT 19577
|| | ||||| ||||||||||| ||||||| |||
Sbjct 285224942 CATCTGTTGATGAATGGTTATACAATAGCGGTCCTTAT 285224905
>seq4
Length=246994605
Score = 87.8 bits (96), Expect = 5e-13
Identities = 112/153 (73%), Gaps = 1/153 (1%)
Strand=Plus/Plus
Query 19385 TATACTCGCCTTTATCGCAGCACCGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTC 19444
|||| || |||| ||||| || | | |||||||| ||||| || |||||||| |||||
Sbjct 144099764 TATAATCACCTT-ATCGCTGCTCGTTCAGTAGATATTGATGGTATTCGTGAGCCTGTTTC 144099822
Query 19445 CGGCTCGTTAATGTACGGAAACAATATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGC 19504
|| || ||| | ||||||||||||||||| ||||| || | |||| | | ||
Sbjct 144099823 TGGTTCTTTATTTTACGGAAACAATATTATCTCTGGTGCTATTATTCCTACTTATGCGGC 144099882
Query 19505 AATAGGACTGCACTTTTATCCGATCTGGGAAGC 19537
|| || |||| ||||| | || ||||||||
Sbjct 144099883 GATCAGATTGCATTTTTACCTAATTTGGGAAGC 144099915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144441142029852
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |