Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zea_20mays_20[refseq_20GCF_5F000005005.2_202017-02-07] 267 sequences; 2,135,083,061 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq4 131 4e-25 seq8 129 1e-24 seq6 125 2e-23 seq5 123 6e-23 seq1 122 2e-22 seq9 105 2e-17 seq2 89.7 1e-12 >seq4 Length=246994605 Score = 131 bits (144), Expect = 4e-25 Identities = 172/236 (73%), Gaps = 12/236 (5%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||||||||| | || || || || | ||||| || || ||||| || ||||| Sbjct 242136629 TGACCACCGCGGAGGCGGAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCT 242136570 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || || ||||| || || || | || || || ||||||||||||||||| || ||| Sbjct 242136569 GCTAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTG---GTCT 242136513 Query 288364 ---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTC 288417 ||||| || ||||| |||||||| ||||| |||||||| || || | || |||| Sbjct 242136512 GGGGGGATGCCCTCTTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCGGAGCTC 242136453 Query 288418 GATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || ||||| || |||| ||||| || || |||||||| Sbjct 242136452 ---TCAACCTCCAGGGTTATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 242136400 Score = 129 bits (142), Expect = 1e-24 Identities = 171/235 (73%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || | ||| | || || || || | ||||| || || ||||| || |||| Sbjct 242135262 CATG-CCTCCCCTGAGGCGGAGAACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGT 242135204 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| || ||||| ||||| || | || || || |||||||| || ||||| || | Sbjct 242135203 CGGCAAGTGTGCGCCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGG---T 242135147 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 | ||| || ||||| || |||||||| || || || ||||| || || | || | Sbjct 242135146 CCGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGG 242135087 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || ||||| ||||| ||||| || || |||||||||||||| |||||||| Sbjct 242135086 ACTCCACCTCGAGGGTGATAGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 242135032 Score = 120 bits (132), Expect = 7e-22 Identities = 168/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || || || || | ||||| || || |||||||| ||||| || Sbjct 242113836 CCACCGCGAAGACGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATATTGTAGTCTGCA 242113777 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || ||||||||||||||||| || |||||| Sbjct 242113776 AGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTG---GTCTGGG 242113720 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || |||||||| || || |||||||| || || | || |||| Sbjct 242113719 GGAATCCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCGATGGTGTCAGAGCTC--- 242113663 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || ||||| || |||| ||||| || || |||||||| Sbjct 242113662 TCAACCTCCAGGGTTATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 242113610 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 ||||| || || || || || |||||||| |||||||| ||||| || | || || || Sbjct 242135456 GTGCTCTCCTTCTGAATGTTGTAGTCGGCCAGCGTGCGCCCGTCCTCGAGCTGCTTGCCA 242135397 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396 || || || || ||||| || ||||| || || || |||||||| || || || Sbjct 242135396 GCAAAAATGAGCCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 242135337 Query 288397 ACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 ||||| || || | || || || || ||||| ||||| ||||| || || || ||| Sbjct 242135336 ACGTTGTCGATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTTCCAGTGAGGGTC 242135277 Query 288457 TTGACGAATATCTGCAT 288473 |||||||| |||||||| Sbjct 242135276 TTGACGAAGATCTGCAT 242135260 Score = 113 bits (124), Expect = 1e-19 Identities = 165/232 (71%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | ||| | || || | || | ||||| || || || || || |||| Sbjct 242135718 CATG-CCACCCCTGAGACGCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGT 242135660 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| |||||||| ||||| || | || || || || || || || ||||| || Sbjct 242135659 CGGCAAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAAATGAGCCGCTGCTGGTCCG 242135600 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || |||||||| || || || || || || || | ||| || | Sbjct 242135599 GAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTATCAGAAGACT 242135540 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || ||||| ||||| || ||||||||||| ||||| |||||||| Sbjct 242135539 CGACCTCAAGGGTGATAGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 242135488 Score = 113 bits (124), Expect = 1e-19 Identities = 165/232 (71%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | ||| | || || | || | ||||| || || ||||| || |||| Sbjct 242136174 CATG-CCACCCCTGAGGCGGAGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGT 242136116 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || | ||||| || || || | || || || ||||||||||| ||||| || Sbjct 242136115 CAGCCAAGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCCG 242136056 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||| || || || || |||||||| || || || ||||| || || | || || | Sbjct 242136055 GTGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCTGAGGACT 242135996 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || ||||||||||| || || |||||||| ||||| |||||||| Sbjct 242135995 CCACCTCAAGGGTGATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 242135944 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| || || ||||||||||| || | || || || |||||| Sbjct 242112888 TCCTTCTGGATGTTGTAGTCAGCAAGTGTGCGTCCGTCCTCAAGCTGCTTGCCGGCGAAG 242112829 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || | ||||| || || || |||||||| || || || || || Sbjct 242112828 ATAAGCCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTG 242112769 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || ||||| ||||| ||||| ||||| || ||||| || Sbjct 242112768 TCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACA 242112709 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 242112708 AAGATCTGCAT 242112698 Score = 104 bits (114), Expect = 6e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 ||||| || || ||||| || ||||||||||| || || || || || | || || || Sbjct 242136368 GTGCTCTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCATCCTCCAGCTGCTTGCCA 242136309 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396 || |||||||| ||||| || ||| || || || || |||||||| || ||||| Sbjct 242136308 GCAAAGATCAGGCGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTTGGCTTTG 242136249 Query 288397 ACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || || | || ||| || || || | ||||| ||||| || |||| ||| Sbjct 242136248 ACATTATCGATTGTGTCAGACGACTCCACCTCCAAGGTGATGGTCTTGCCAGTCAATGTC 242136189 Query 288457 TTGACGAATATCTGCAT 288473 || || || |||||||| Sbjct 242136188 TTCACAAAGATCTGCAT 242136172 Score = 102 bits (112), Expect = 2e-16 Identities = 153/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||| | ||||| || || ||||| || ||||| || | ||||| || || Sbjct 242113593 AGCACCAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGACCATCC 242113534 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || ||||||||||| ||||| || ||||| || || || ||| Sbjct 242113533 TCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 242113474 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATC 288438 ||||| || || ||||| || || || | || |||| || || || | ||||| Sbjct 242113473 TGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTC---TCAACCTCCAAGGTGATG 242113417 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| || |||| ||||| ||||| ||||||||| Sbjct 242113416 GTCTTGCCAGTCAATGTCTTCACGAAGATCTGCATT 242113381 Score = 91.5 bits (100), Expect = 3e-13 Identities = 160/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | ||| | || || | || | ||||| || || ||||| || || | Sbjct 242135946 CATG-CCACCCCTGAGACGCAGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAAT 242135888 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || || || || || | || || || || ||||| || ||||| || Sbjct 242135887 CTGCAAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGCCGCTGCTGGTCCG 242135828 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||| || || || || |||||||| || || || || || || || | || || | Sbjct 242135827 GTGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAGGACT 242135768 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || ||||||||||| || || || ||||| ||||| |||||||| Sbjct 242135767 CCACCTCAAGGGTGATCGTCTTGCCAGTAAGTGTCTTCACGAAGATCTGCAT 242135716 >seq8 Length=181122637 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||||||| ||||| || || || | ||||| || |||||| Sbjct 40272219 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAG 40272160 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || ||||| || || || |||||||| || || |||||||| Sbjct 40272159 ATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTG 40272100 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || || |||||||| |||||||| ||||| ||||| ||| Sbjct 40272099 TCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACG 40272040 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 40272039 AAGATCTGCAT 40272029 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| || || ||||| || ||||||||| Sbjct 176849818 CCACCTCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 176849877 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 176849878 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGG 176849937 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || || || |||||||| || || | || || || || Sbjct 176849938 ATGCCCTCCTTGTCCTGTATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 176849997 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | |||||| || ||||| ||||| ||||| ||||| |||||||| Sbjct 176849998 TCCAACGTGATGGTTTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 176850044 >seq6 Length=174033170 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || || || | ||| || || || || || ||||||||| Sbjct 129161946 CCACCGCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCG 129162005 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 129162006 AGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGGGGG 129162065 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || ||||| || || || | ||| || || || Sbjct 129162066 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCGGAGGACTCCACC 129162125 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| |||||||| ||||||||||| || || |||||||| Sbjct 129162126 TCCAAAGTGATGGTCTTCCCCGTCAGAGTCTTCACAAAGATCTGCAT 129162172 Score = 114 bits (126), Expect = 3e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 269119 GAGTTCATTTGTGACGCTATCCCATGT-TCTATGATCGGTATGAATGCCGATCTCATGAA 269177 |||||| | || ||||| |||| ||| || | |||| ||||| | || ||||||| Sbjct 122043249 GAGTTCGTCTGCGACGCCCTCCC-TGTCTCCCTCGTCGGCATGAACGGGGACCTCATGAG 122043307 Query 269178 TCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTA 269237 || || ||||| |||||||| || || | ||| ||| ||||| | |||| |||| Sbjct 122043308 CCAGTACATCGAGTTCGTGGCCGACCGCCTGCTCATGGCGCTCGGGTGCAAGAAGATGTA 122043367 Query 269238 CAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTT 269297 ||| || || ||||||| || ||||| || || ||||| | |||||||| ||||| Sbjct 122043368 CAACGTGACCAACCCCTTCGACTGGATGGAGCTCATCTCGCTGCAGGGAAAGACCAACTT 122043427 Query 269298 CTTCGAAAAGCGTGTCAGCGACTATCA 269324 |||||| ||||| ||| | ||||| || Sbjct 122043428 CTTCGAGAAGCGCGTCGGTGACTACCA 122043454 >seq5 Length=223902240 Score = 123 bits (136), Expect = 6e-23 Identities = 168/233 (72%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| ||||| | || || || || | ||||| || |||||||| || ||||| Sbjct 84631469 TGACCACCACGGAGACGGAGCACAAGGTGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCT 84631528 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || || ||||| || || || | ||||| || ||||||||||||||||| || Sbjct 84631529 GCTAGGGTGCGGCCATCCTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGG 84631588 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||||| || || || |||||||| ||||| ||||| || || || | || |||| Sbjct 84631589 GGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGAGCTC--- 84631645 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || || || || ||||| ||||| || || |||||||| Sbjct 84631646 TCAACCTCCAGGGTTATGGTTTTTCCAGTCAGGGTCTTTACAAAGATCTGCAT 84631698 Score = 111 bits (122), Expect = 4e-19 Identities = 166/233 (71%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | || || || |||| ||||| || || ||||| || ||||| ||| Sbjct 84631700 CCACCTCTGAGGCGGAGAACAAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGCG 84631759 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || |||||||||||||| || |||||| Sbjct 84631760 AGAGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAGATCAGACGCTGCTG---GTCTGGG 84631816 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || |||||||| || || ||||| || || || | || |||| Sbjct 84631817 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCAGAGCTC--- 84631873 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| ||||| || |||| ||||| || || |||||||| Sbjct 84631874 TCCACCTCCAAGGTGATGGTCTTGCCAGTCAATGTCTTCACAAAAATCTGCAT 84631926 >seq1 Length=307041717 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || || || || | ||| || || ||||| || ||||||||| Sbjct 193515074 CCGCCGCGGAGGCGGAGCACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGCG 193515133 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 193515134 AGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGGGGG 193515193 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || ||||| || || || | || || || || Sbjct 193515194 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCCGAGGACTCCACC 193515253 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| |||||||| ||||||||||| || || |||||||| Sbjct 193515254 TCCAAAGTGATGGTCTTCCCCGTCAGAGTCTTCACAAAGATCTGCAT 193515300 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| ||||| ||||| |||| ||| || |||||||| |||||||| || Sbjct 31512350 CCACCGCGGAGCCTAAGCACGAGGTGAAGCGTAGACTCCTTTTGGATGTTATAGTCCGCA 31512409 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTG 288356 || ||||| || || || | || || || || |||||||| ||||| || Sbjct 31512410 AGGGTGCGGCCATCCTCCAGCTGCTTCCCGGCAAAGATCAGCCGCTGCTG 31512459 >seq9 Length=159769782 Score = 105 bits (116), Expect = 2e-17 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 269119 GAGTTCATTTGTGACGCTATCCCATGTT-CTATGATCGGTATGAATGCCGATCTCATGAA 269177 |||||| | || ||||| |||| ||| | | |||| ||||| | |||||||||| Sbjct 30987549 GAGTTCGTCTGCGACGCCCTCCC-TGTCGCGCTCGTCGGCATGAACGGGGATCTCATGAG 30987607 Query 269178 TCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTA 269237 || || || ||||||||||| || || | ||| ||| ||||| | |||| |||| Sbjct 30987608 CCAGTACATTGAATTCGTGGCCGACCGCCTGCTCATGGCGCTCGGGTGCAAGAAGATGTA 30987667 Query 269238 CAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTT 269297 ||| || |||||||||| || ||||| || || ||||| || ||||| ||||| Sbjct 30987668 CAACGTGACCAATCCCTTCGACTGGATGGAGCTCATCTCGCTGATGGGGAAGACCAACTT 30987727 Query 269298 CTTCGAAAAGCGTGTCAGCGACTATCA 269324 |||||| ||||| || | ||||| || Sbjct 30987728 CTTCGAGAAGCGCGTGGGTGACTACCA 30987754 >seq2 Length=244442276 Score = 89.7 bits (98), Expect = 1e-12 Identities = 131/185 (71%), Gaps = 3/185 (2%) Strand=Plus/Plus Query 288298 TAGTCGGCGAGCGTGCGTCCGTCTTCT---AATTGTTTTCCTGCGAAGATCAGACGCTGT 288354 |||||||| || ||||| ||||| || | || || || ||||||| || ||||| Sbjct 204323104 TAGTCGGCCAGGGTGCGGCCGTCGTCGTCCAGCTGCTTGCCCGCGAAGACGAGGCGCTGC 204323163 Query 288355 TGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG 288414 | ||||| ||||| || ||||||| | || |||||||| || | | ||| Sbjct 204323164 TCCTCCGGCGGGATGCCTTCCTTGCCCTGGATCATGGCCTTCACGTTCTCGACGGTGTCG 204323223 Query 288415 CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || | || || || ||||||||||||||||| ||| ||||| ||||| | |||||| Sbjct 204323224 CTGCACTCCACCTCCAGCGTGATCGTCTTCCCCACCAGCGTCTTCACGAACACCTGCATC 204323283 Query 288475 ATGTT 288479 || || Sbjct 204323284 ATCTT 204323288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179650364476026