Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zea_20mays_20[refseq_20GCF_5F000005005.2_202017-02-07] 267 sequences; 2,135,083,061 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq5 95.1 1e-14 >seq5 Length=223902240 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 101279 TCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAAT 101338 || || || || |||||||| || | || | | |||| |||| ||||| || || || Sbjct 84632192 TCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAG 84632251 Query 101339 ATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATT 101398 ||||||||||| || || || || ||||| || || || || || || || ||| | Sbjct 84632252 ATCAAACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 84632311 Query 101399 TCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACA 101458 || | ||||| || | ||||| || || |||| || |||||||| | || || || Sbjct 84632312 TCGATGGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTCACG 84632371 Query 101459 AATATCTGCATG 101470 || ||||||||| Sbjct 84632372 AAGATCTGCATG 84632383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396277110485319