Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zea_20mays_20[refseq_20GCF_5F000005005.2_202017-02-07] 267 sequences; 2,135,083,061 total letters Query= NC_021221.1 Length=45781 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 2e-11 >seq1 Length=307041717 Score = 82.4 bits (90), Expect = 2e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 1172 TCGGGGCTGGCGGTGAAACACTTTATCGATGTGGGGGCGGGCGTGATAGACGGCGACTAT 1231 |||||||||||| |||| |||| ||||| ||||| || |||||||| |||| ||||| Sbjct 262588639 TCGGGGCTGGCGCTGAAGCACTCCATCGACGTGGGCGCCGGCGTGATCGACGCGGACTAC 262588580 Query 1232 CGAGGCATCGTGTGCGTGCTGCTGTTTAATTTCTCAGACAGCGATTACCACGTGCGGTGC 1291 |||||| ||| |||| | || || || ||| ||| ||| | | |||| | | Sbjct 262588579 CGAGGCCCCGTCGGCGTCATCCTCTTCAACCACTCCGACGCCGACTTCGCCGTGAAGCCC 262588520 Query 1292 GGCGATAGGGTCGTGCAATTGAT 1314 ||||| ||| ||| ||| |||| Sbjct 262588519 GGCGACAGGATCGCGCAGATGAT 262588497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146377135891522