Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zea_20mays_20[refseq_20GCF_5F000005005.2_202017-02-07] 267 sequences; 2,135,083,061 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq5 87.8 2e-12 >seq5 Length=223902240 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 194236 CGTATACCTGAAATAGGGGATAAATTTTGTT-CGGGAATGGCTCAAAAAGGAACTTGTGG 194294 || ||||| |||| || || || ||| | | || |||| |||||||||||| ||| Sbjct 17284046 CGCATACCACAAATTGGCGACAAGTTTAGCAGCAGGCATGGA-CAAAAAGGAACTGTTGG 17283988 Query 194295 TATGATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTAT 194354 |||| ||| | ||||| |||||||||| |||| ||| || ||| |||||||| Sbjct 17283987 GATGACTTACACTCAAGAGGATATGCCATGGACAATCGAAGGCATTACACCTGATATTAT 17283928 Query 194355 TATCAATCCAAATTGTATTCCGTCCAGAATGACCATTAATCAAATTATTGCTACTGTTAT 194414 | | |||||| || |||||| ||| | ||||| ||| || | |||| | |||| Sbjct 17283927 TGTGAATCCACATGCTATTCCATCCCGTATGACTATTGGGCAGCTGATTGAGTGTATTAT 17283868 Query 194415 GGGTAAA 194421 ||||||| Sbjct 17283867 GGGTAAA 17283861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632487489065960