Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zea_20mays_20[refseq_20GCF_5F000005005.2_202017-02-07] 267 sequences; 2,135,083,061 total letters Query= NC_022563.1 Length=148803 Score E Sequences producing significant alignments: (Bits) Value seq10 91.5 1e-13 >seq10 Length=150982314 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 117495 GGTCTTCTTCGGCCCGCTCTACTACCTGCGGCTGCGCCACCTGACGCAGGACAAGGCCAC 117554 ||| ||| | || ||| || ||||| ||||||| |||| || || ||||||||| | Sbjct 72345913 GGTGTTCATGGGGCCGACCTTCTACCAGCGGCTGGTCCACATGGCGGAGGACAAGGTGAA 72345854 Query 117555 CGTCCGCTGC-CGGGGCAAGAAGACCAAGCTCATCCGGCAGGCCAACGAGGGCCGCAAGC 117613 |||| | |||| | | ||| ||||| |||||| | |||| | |||| Sbjct 72345853 GTTCCGGAACACGGGTCCGGTGCACCC-GCTCACGCGGCAGCCGGTGGAGGACAAGAAGC 72345795 Query 117614 GCGGGGGCGGCATCAAGTTCGGGGAGATGGAGCGGGACTGCATCATCGCGCACGGCGCGG 117673 | |||||| |||||||||||||||||||||| |||||||| | ||||||||||| | Sbjct 72345794 GGTTCGGCGGCGTCAAGTTCGGGGAGATGGAGCGCGACTGCATGCTGGCGCACGGCGCCG 72345735 Query 117674 CC 117675 || Sbjct 72345734 CC 72345733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476040011211160