Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zea_20mays_20[refseq_20GCF_5F000005005.2_202017-02-07] 267 sequences; 2,135,083,061 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 3e-11 >seq1 Length=307041717 Score = 84.2 bits (92), Expect = 3e-11 Identities = 116/158 (73%), Gaps = 6/158 (4%) Strand=Plus/Minus Query 201567 CGTATACCAGAAATTGGAGATAAATTTTGTTCT-GGAATGGCCCAAAAAGGAACTTGTGG 201625 || |||||| |||||||||| || ||| | | || |||| | ||||||||||| ||| Sbjct 254671867 CGAATACCACAAATTGGAGACAAGTTTAGCAGTAGGCATGGAC-AAAAAGGAACTGTTGG 254671809 Query 201626 TATGATTTATGCACAAGAAGATATGCCGTTTACACAATCG--GGTATGACCCCGGATATT 201683 |||| ||| | ||||| |||||||| | ||||||| || || || || |||||| Sbjct 254671808 GATGACTTACACTCAAGAGGATATGCC--ATGGACAATCGAAGGCATCACACCTGATATT 254671751 Query 201684 ATAATCAATCCAAATTGTATACCATCAAGAATGACCAT 201721 || | |||||| || ||| ||||| | ||||| || Sbjct 254671750 ATTGTGAATCCACATGCTATTCCATCCCGTATGACTAT 254671713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655277813003000