Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zea_20mays_20[refseq_20GCF_5F000005005.2_202017-02-07] 267 sequences; 2,135,083,061 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq5 87.8 2e-12 >seq5 Length=223902240 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 192993 CGTATACCTGAAATAGGGGATAAATTTTGTT-CGGGAATGGCCCAAAAAGGAACTTGTGG 193051 || ||||| |||| || || || ||| | | || |||| | ||||||||||| ||| Sbjct 17284046 CGCATACCACAAATTGGCGACAAGTTTAGCAGCAGGCATGGAC-AAAAAGGAACTGTTGG 17283988 Query 193052 TATGATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTAT 193111 |||| ||| | ||||| |||||||||| |||| ||| || ||| |||||||| Sbjct 17283987 GATGACTTACACTCAAGAGGATATGCCATGGACAATCGAAGGCATTACACCTGATATTAT 17283928 Query 193112 TATTAATCCAAATTGTATTCCGTCCAGAATGACCATTAATCAAATTATTGCTACTGTTAT 193171 | | |||||| || |||||| ||| | ||||| ||| || | |||| | |||| Sbjct 17283927 TGTGAATCCACATGCTATTCCATCCCGTATGACTATTGGGCAGCTGATTGAGTGTATTAT 17283868 Query 193172 GGGTAAA 193178 ||||||| Sbjct 17283867 GGGTAAA 17283861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628529102277120