Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zea_20mays_20[refseq_20GCF_5F000005005.2_202017-02-07]
267 sequences; 2,135,083,061 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq4 105 4e-18
seq5 100 2e-16
seq8 89.7 3e-13
seq6 86.0 4e-12
seq1 82.4 5e-11
>seq4
Length=246994605
Score = 105 bits (116), Expect = 4e-18
Identities = 152/212 (72%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599
||||| || || |||||||| || || ||||||||||| | || |||||| | || ||
Sbjct 242113363 CACCAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAATCCGCAAGGGTGCGTCCATCCTC 242113304
Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659
|| || || |||||||| || | ||||||||| || |||| | || || |||||
Sbjct 242113303 CAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 242113244
Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718
|| || | | |||| ||| | ||| || || ||||| |||| ||||| || |
Sbjct 242113243 GATCTT-GGCCTTGACATTGTCAATGGTATCTGAAGACTCCACCTCAAGAGTGATGGTCT 242113185
Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || || | ||||| |||||||||||||||
Sbjct 242113184 TGCCAGTAAGGGTTTTCACAAAGATCTGCATA 242113153
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| || | ||| | |||||| || || |||||||| || || |||||||| || |
Sbjct 242113153 ACCACCCCTAAGACGCAGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGC 242113094
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | | || ||||| || || |||||||| || | ||| ||||| || | ||
Sbjct 242113093 AAGGGTCCTCCCATCCTCCAACTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCAGGTGG 242113034
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700
| || || ||||| || || || | |||| |||| |||||| || ||||
Sbjct 242113033 GATGCCCTCCTTGTCCTGGATCTT-TGCCTTGACATTGTCAATGGTGTCTGAGGACTCCA 242112975
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| |||| ||||| || || || || || || || ||||||||||||||
Sbjct 242112974 CCTCAAGGGTGATTGTCTTGCCAGTCAAGGTCTTGACAAAGATCTGCAT 242112926
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||| ||| || | ||||| || || |||||||| || || |||||||| ||||
Sbjct 242136399 ACCACCTCGCAAGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGC 242136340
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| || || | || |||| || || || ||||| |||| |||||||| || | ||
Sbjct 242136339 GAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGTGG 242136280
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || ||||| || || ||| | ||| || | ||||| || ||||
Sbjct 242136279 AATGCCCTCCTTGTCCTGGATCTTGGCTTTGA-CATTATCGATTGTGTCAGACGACTCCA 242136221
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| || || || || || || || ||||||||||||||
Sbjct 242136220 CCTCCAAGGTGATGGTCTTGCCAGTCAATGTCTTCACAAAGATCTGCAT 242136172
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | || | ||||| || ||||||||||| || || |||||||| || |
Sbjct 242136627 ACCACCGCGGAGGCGGAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCTGC 242136568
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| | || |||| || || ||||| || |||| ||||||||| ||| | ||
Sbjct 242136567 TAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGG 242136508
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || |||||||| || ||| ||| || | ||| | ||||||| || |
Sbjct 242136507 GATGCCCTCTTTGTCCTGGATCTTCGCCTTC-ACGTTGTCGATGGTGTCGGAGCTCTCAA 242136449
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || || || || || || || |||||||||||||||
Sbjct 242136448 CCTCCAGGGTTATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATA 242136399
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| || | ||| | |||||| || || |||||||| || || |||||||| ||||
Sbjct 242135714 CCACCCCTGAGACGCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGCA 242135655
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| |||| || | || || ||||||||||| | |||||||| || | ||
Sbjct 242135654 AGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAAATGAGCCGCTGCTGGTCCGGAGGG 242135595
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || || | | |||| ||| | ||| || || || ||
Sbjct 242135594 ATGCCCTCCTTGTCCTGGATCTT-GGCCTTGACATTGTCAATGGTATCAGAAGACTCGAC 242135536
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|||| ||||| || || || || | || || || |||||||||||
Sbjct 242135535 CTCAAGGGTGATAGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 242135488
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| || | ||| | |||||| || || |||||||| || || ||||||||||| |
Sbjct 242135942 CCACCCCTGAGACGCAGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCTGCA 242135883
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| || || | || |||| || || || ||||| || | |||||||| || | ||
Sbjct 242135882 AGGGTACGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGCCGCTGCTGGTCCGGTGGA 242135823
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || || | | |||| ||| | |||||| || |||||
Sbjct 242135822 ATGCCCTCCTTGTCCTGGATCTT-GGCCTTGACATTGTCGATGGTGTCCGAGGACTCCAC 242135764
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|||| |||||||| || || || | || || || |||||||||||
Sbjct 242135763 CTCAAGGGTGATCGTCTTGCCAGTAAGTGTCTTCACGAAGATCTGCAT 242135716
Score = 89.7 bits (98), Expect = 3e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| || || | ||| |||||||| || || |||||||| || || |||||||| ||||
Sbjct 242135486 CCGCCCCTGAGACGCAACACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGCC 242135427
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| |||| || | || || || |||||||| | |||||||| || | ||
Sbjct 242135426 AGCGTGCGCCCGTCCTCGAGCTGCTTGCCAGCAAAAATGAGCCGCTGCTGGTCCGGAGGG 242135367
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || || || | | | ||| | |||||| || |||||
Sbjct 242135366 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGAAGACTCCAC 242135308
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || || || || | || || || |||||||||||
Sbjct 242135307 CTCGAGGGTGATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 242135260
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| || | || | |||||| || || |||||||| || || |||||||| || |
Sbjct 242136170 CCACCCCTGAGGCGGAGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCC 242136111
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| ||||| | || |||| || || ||||| || |||| |||||||| || | ||
Sbjct 242136110 AAGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCCGGTGGA 242136051
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701
| || || ||||| || || || | | | |||| |||||| || |||||
Sbjct 242136050 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCTGAGGACTCCAC 242135992
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|||| |||||||| || || || | || || || |||||||||||
Sbjct 242135991 CTCAAGGGTGATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 242135944
Score = 82.4 bits (90), Expect = 5e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| || |||| || | ||||| ||| || |||||||| || || |||||||| || |
Sbjct 242113609 ACCGCCCCTCAGGCGGAGCACCAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGC 242113550
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| ||||| | || |||| || || ||||| || |||| |||||||| || | ||
Sbjct 242113549 CAAGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCCGGGGG 242113490
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700
| ||| || ||||| || || |||| ||| ||| ||||||| || |
Sbjct 242113489 GATACCCTCCTTGTCCTGGATCTTGGCCTTCA-CATTATCAATGGTGTCGGAGCTCTCAA 242113431
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| || || || || || || || || |||||||||||
Sbjct 242113430 CCTCCAAGGTGATGGTCTTGCCAGTCAATGTCTTCACGAAGATCTGCAT 242113382
>seq5
Length=223902240
Score = 100 bits (110), Expect = 2e-16
Identities = 164/231 (71%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | ||| | || || |||||||| ||||| |||||||| || |
Sbjct 84631471 ACCACCACGGAGACGGAGCACAAGGTGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCTGC 84631530
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| | || |||| ||||| ||||| || |||| ||||||||| || | ||
Sbjct 84631531 TAGGGTGCGGCCATCCTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGG 84631590
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCC 33699
| || || ||||| || ||| |||| ||| ||| | |||||| | | | ||
Sbjct 84631591 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CATTGTCGATGGTGTC-CGAGCTCTCA 84631648
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| || | || || ||||| || || | || ||||||||||||||||||
Sbjct 84631649 ACCTCCAGGGTTATGGTTTTTCCAGTCAGGGTCTTTACAAAGATCTGCATA 84631699
Score = 95.1 bits (104), Expect = 8e-15
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| || | ||| | ||||| || || |||||||| || || ||||||||||| |
Sbjct 84632155 ACCACCCCTGAGACGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCCGC 84632214
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| | || |||| || || || || || |||||||||||||| || | ||
Sbjct 84632215 AAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGTGG 84632274
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || ||||| || || | | |||| ||| | |||||| || ||||
Sbjct 84632275 GATGCCCTCCTTGTCCTGGATCTT-GGCCTTGACATTGTCGATGGTGTCTGAAGACTCCA 84632333
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| || || || || | || || || |||||||||||
Sbjct 84632334 CCTCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 84632382
Score = 91.5 bits (100), Expect = 1e-13
Identities = 167/241 (69%), Gaps = 4/241 (2%)
Strand=Plus/Plus
Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570
|||||| || ||||| || | || | ||||| || ||||||||||| || || |||
Sbjct 84631916 AAAATCTGCATGCCACCCCTGAGGCGGAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATG 84631975
Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630
|||||||| | || ||||| | || |||| || || ||||| || || | ||||||
Sbjct 84631976 TTGTAATCCGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGC 84632035
Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689
|| || | || | || || ||||| || || | | |||| ||| | ||| ||
Sbjct 84632036 TGGTCGGGTGGGATGCCCTCCTTGTCCTGGATCTT-GGCCTTGACATTGTCAATGGTATC 84632094
Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| ||||| |||| ||||| || || || || | || || ||||||||||||||
Sbjct 84632095 CGAAGACTCCACCTCAAGGGTGATTGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 84632154
Query 33750 A 33750
|
Sbjct 84632155 A 84632155
Score = 89.7 bits (98), Expect = 3e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599
|||||| || || |||||||| || || |||||||| |||| || ||||| |||| ||
Sbjct 84632629 CACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGCAAGCGTGCGCCCGTCCTC 84632688
Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659
| || || || ||||| || | |||||||| ||| | || | || || |||||
Sbjct 84632689 AAGCTGCTTCCCAGCAAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTG 84632748
Query 33660 AATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718
|| || || | | | |||| |||||| || ||||| || | ||||| || |
Sbjct 84632749 GATCTTGGCCTTGA-CGTTGTCAATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCT 84632807
Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || || | ||||| ||||||||||||||
Sbjct 84632808 TGCCGGTCAGGGTTTTCACAAAGATCTGCAT 84632838
Score = 89.7 bits (98), Expect = 3e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| || || | ||| | ||| | || || |||||||| || || |||||||| || |
Sbjct 84632840 CCTCCCCTGAGACGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCA 84632899
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| |||| || | ||||| || ||||| || | |||||||| ||| | ||
Sbjct 84632900 AGCGTGCGCCCGTCCTCAAGCTGTTTGCCAGCAAAGATGAGCCGCTGCTGGTCTGGGGGG 84632959
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701
| || || ||||| || || || ||| | |||| |||||| || |||||
Sbjct 84632960 ATGCCCTCCTTGTCCTGGATCTTGGCCTT-AACGTTGTCAATGGTGTCAGACGACTCCAC 84633018
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || || || || | ||||| ||||||||||||||
Sbjct 84633019 CTCGAGGGTGATAGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 84633066
Score = 86.0 bits (94), Expect = 4e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599
|||||| || || |||||||| || || |||||||| |||| || ||||| |||| ||
Sbjct 84632401 CACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGCAAGCGTGCGCCCGTCCTC 84632460
Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659
| || ||||| ||||| || | |||||||| ||| | || | || || |||||
Sbjct 84632461 AAGCTGCTTTCCAGCAAAGATGAGCCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTG 84632520
Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718
|| || || | | | ||| | |||||| || ||||| || | ||||| || |
Sbjct 84632521 GATCTTGGCCTTGA-CGTTGTCGATGGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCT 84632579
Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || || | || || || |||||||||||
Sbjct 84632580 TGCCGGTCAGGGTCTTCACGAAGATCTGCAT 84632610
>seq8
Length=181122637
Score = 89.7 bits (98), Expect = 3e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||||| | || | ||||| || || ||| ||| || || |||||||| |||| |
Sbjct 176849818 CCACCTCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 176849877
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| |||| || | || || ||||| || || | |||||||| || ||||
Sbjct 176849878 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGG 176849937
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || || |||| | | ||| | |||||| || |||||
Sbjct 176849938 ATGCCCTCCTTGTCCTGTATCTTGGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCAC 176849996
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | |||||| ||||| || || | || || || |||||||||||
Sbjct 176849997 CTCCAACGTGATGGTTTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 176850044
>seq6
Length=174033170
Score = 86.0 bits (94), Expect = 4e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599
||||| || || ||| ||| || || |||||||| |||| ||| ||||| |||| ||
Sbjct 129161963 CACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGACCGTCCTC 129162022
Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659
| || || ||||| || || | |||||||| || | || | || || |||||
Sbjct 129162023 GAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 129162082
Query 33660 AATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718
|| || |||| ||| |||| ||||||| || ||||| || | ||||| || |
Sbjct 129162083 GATCTTGGCCTTCA-CATTGTCAATGGTGTCGGAGGACTCCACCTCCAAAGTGATGGTCT 129162141
Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || || | || || ||||||||||||||
Sbjct 129162142 TCCCCGTCAGAGTCTTCACAAAGATCTGCAT 129162172
>seq1
Length=307041717
Score = 82.4 bits (90), Expect = 5e-11
Identities = 150/217 (69%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599
||||| || || ||| ||| || || |||||||| |||| ||| ||||| |||| ||
Sbjct 193515091 CACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTC 193515150
Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659
| || || ||||| || || | |||||||| || | || | || || |||||
Sbjct 193515151 GAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 193515210
Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718
|| || |||| ||| ||| | |||||| || ||||| || | ||||| || |
Sbjct 193515211 GATCTTGGCCTTCA-CATTGTCGATGGTGTCCGAGGACTCCACCTCCAAAGTGATGGTCT 193515269
Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGG 33755
| || || | || || |||||||||||||| ||||
Sbjct 193515270 TCCCCGTCAGAGTCTTCACAAAGATCTGCATCTTTGG 193515306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328702930376640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |