Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zea_20mays_20[refseq_20GCF_5F000005005.2_202017-02-07] 267 sequences; 2,135,083,061 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq5 132 4e-26 seq4 125 6e-24 seq8 109 5e-19 seq6 107 2e-18 seq9 84.2 2e-11 >seq5 Length=223902240 Score = 132 bits (146), Expect = 4e-26 Identities = 170/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| || | ||| | |||||| || || |||||||| || || || || || || Sbjct 84632608 CATGCCTCCCCTGAGGCGCAGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTC 84632667 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 |||||| || || |||| |||||||| || || ||||| || || ||||||||||| | Sbjct 84632668 GGCAAGCGTGCGCCCGTCCTCAAGCTGCTTCCCAGCAAAGATGAGCCGCTGCTGGTCTGG 84632727 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACT 39232 || | || ||| |||||| ||| || |||| ||| | | | || || |||| Sbjct 84632728 AGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCAGAGGACT 84632786 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| || | |||||| | || || ||||| ||||| |||||||| ||||| Sbjct 84632787 CCACCTCGAGGGTGATAGTCTTGCCGGTCAGGGTTTTCACAAAGATCTGCAT 84632838 Score = 131 bits (144), Expect = 1e-25 Identities = 171/234 (73%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| || | || | ||| | || || |||||||| || || || || || || Sbjct 84632836 CATGCCTCCCCTGAGACGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTC 84632895 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 ||||| || || |||| |||||||||||||| ||||| || || ||||||||||| | Sbjct 84632896 AGCAAGCGTGCGCCCGTCCTCAAGCTGTTTGCCAGCAAAGATGAGCCGCTGCTGGTCTGG 84632955 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACT 39232 ||| | || ||| |||||| ||| || | | | ||| | | | || || ||||| Sbjct 84632956 GGGGATGCCCTCCTTGTCCTGGATCTT-GGCCTTAACGTTGTCAATGGTGTCAGACGACT 84633014 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 |||| || | |||||| | || || ||||| ||||| |||||||| ||||||| Sbjct 84633015 CCACCTCGAGGGTGATAGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCATCT 84633068 Score = 127 bits (140), Expect = 2e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| || | ||| | |||||| || || |||||||| || || || || || || Sbjct 84632380 CATGCCTCCCCTGAGGCGCAGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTC 84632439 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 |||||| || || |||| |||||||| || || ||||| || || ||||||||||| | Sbjct 84632440 GGCAAGCGTGCGCCCGTCCTCAAGCTGCTTTCCAGCAAAGATGAGCCGCTGCTGGTCTGG 84632499 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACT 39232 ||| | || ||| |||||| ||| || |||| ||| | | | || || |||| Sbjct 84632500 GGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCTGAAGACT 84632558 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| || | |||||| | || || ||||| || || || ||||| ||||| Sbjct 84632559 CCACCTCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 84632610 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| || || | ||| | ||||| || || |||||||| || || || || ||||| Sbjct 84631924 CATGCCACCCCTGAGGCGGAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATC 84631983 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 || || || || | || || ||||| ||||| || || || || ||||||||||||| Sbjct 84631984 CGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGG 84632043 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233 || | || ||| |||||| ||| || |||| | | | ||||| ||||| Sbjct 84632044 TGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTATCCGAAGACTC 84632103 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||| || | ||||| | || || || || || || |||||||| ||||| Sbjct 84632104 CACCTCAAGGGTGATTGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 84632154 Score = 98.7 bits (108), Expect = 9e-16 Identities = 146/206 (71%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || |||||||| ||||| || || || || || || || || | || || |||||| Sbjct 84631496 TGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCTGCTAGGGTGCGGCCATCCTCCAGCTGT 84631555 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||| | ||| | || ||| |||||| ||| ||| Sbjct 84631556 TTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTC 84631615 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || | | | | || || ||| ||| || |||| || || ||||||| Sbjct 84631616 GCCTTCACATTGTCGATGGTGTCCGAGCT---CTCAACCTCCAGGGTTATGGTTTTTCCA 84631672 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || |||||||| ||||| Sbjct 84631673 GTCAGGGTCTTTACAAAGATCTGCAT 84631698 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| || || |||||||| || || || || ||||| ||||| || || | || || Sbjct 84632173 CACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTC 84632232 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGT-CGGTGGGCACGCTCTCTTTGTCCA 39193 ||||| ||||| || || || | ||||||||||| ||||||| | || ||| |||||| Sbjct 84632233 CAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGTGGG-ATGCCCTCCTTGTCCT 84632291 Query 39194 TGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 ||| || |||| | | | || || |||||||| || | |||||| | | Sbjct 84632292 GGATCTTGGCCTTGACATTGTCGATGGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCT 84632351 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || ||||| || || || ||||| ||||| Sbjct 84632352 TGCCGGTCAGGGTCTTCACGAAGATCTGCAT 84632382 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || ||||| | ||| | || | || || |||||||| || || || || || || || Sbjct 84631700 CCACCTCTGAGGCGGAGAACAAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGCG 84631759 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || ||||| ||||||||||| || |||||||||||||| | ||| Sbjct 84631760 AGAGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAGATCAGACGCTGCTGGTCTGGGGGA 84631819 Query 39178 ACGCTCTCTTTGTCCATGATTTT 39200 | || ||| |||||| ||| || Sbjct 84631820 ATGCCCTCCTTGTCCTGGATCTT 84631842 >seq4 Length=246994605 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 ||||| || | ||| | ||||| || || |||||||| || || || || ||||| ||| Sbjct 242113380 CCTCCCCTGAGGCGCAGCACCAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAATCCGCA 242113321 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || ||| | || || ||||| ||||| ||||| ||||||||||||||||| | || Sbjct 242113320 AGGGTGCGTCCATCCTCCAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCCGGCGGG 242113261 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||| |||||| ||| || |||| | | | ||||| |||||||| Sbjct 242113260 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTATCTGAAGACTCCACC 242113201 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| | || || || || ||||| |||||||| ||||| Sbjct 242113200 TCAAGAGTGATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 242113154 Score = 118 bits (130), Expect = 9e-22 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| || | ||| | |||||| || || || ||| || || || || || || Sbjct 242112928 CATGCCTCCCCTAAGGCGCAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTC 242112869 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 |||||||| ||| |||| |||||||| ||||| || || ||||| ||||||||||| | Sbjct 242112868 AGCAAGTGTGCGTCCGTCCTCAAGCTGCTTGCCGGCGAAGATAAGCCGCTGCTGGTCAGG 242112809 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233 || | || ||| |||||| ||| || |||| | | | || || ||||| Sbjct 242112808 AGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCAATGGTGTCAGAAGACTC 242112749 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 ||| || | |||||| | || || || || || || |||||||| ||||||| Sbjct 242112748 CACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCT 242112696 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| || || | || |||||||| || || |||||||| || || || || || || Sbjct 242135490 CATGCCGCCCCTGAGACGCAACACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTC 242135431 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 ||| || || || |||| || ||||| ||||| ||||| || || ||||||||||| | Sbjct 242135430 GGCCAGCGTGCGCCCGTCCTCGAGCTGCTTGCCAGCAAAAATGAGCCGCTGCTGGTCCGG 242135371 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACT 39232 || | || ||| |||||| ||| || |||| ||| | | | || || |||| Sbjct 242135370 AGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGAAGACT 242135312 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| || | |||||| | ||||| || || || || || ||||| ||||| Sbjct 242135311 CCACCTCGAGGGTGATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 242135260 Score = 113 bits (124), Expect = 4e-20 Identities = 167/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| || | ||| | || | || || |||||||| || || || || || || Sbjct 242135262 CATGCCTCCCCTGAGGCGGAGAACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTC 242135203 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 ||||||||| || |||| || ||||| ||||| || || || || ||||||||||| | Sbjct 242135202 GGCAAGTGTGCGCCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCCGG 242135143 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACT 39232 ||| | || || |||||| ||| || |||| ||| | | | || || |||| Sbjct 242135142 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCAGAGGACT 242135084 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 |||| || | |||||| | ||||| || || || || || ||||| ||||||| Sbjct 242135083 CCACCTCGAGGGTGATAGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCATCT 242135030 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || |||| ||||| | ||||| || || |||||||| || || || || || ||||| Sbjct 242136398 CCACCTCGCAAGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGCG 242136339 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || ||||| ||||| ||||| || || ||||||||||| | || Sbjct 242136338 AGGGTACGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGA 242136279 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||| |||||| ||| || ||||| | | | || || ||||||||| Sbjct 242136278 ATGCCCTCCTTGTCCTGGATCTTGGCTTTGACATTATCGATTGTGTCAGACGACTCCACC 242136219 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| ||||| | || || |||| || || |||||||| ||||| Sbjct 242136218 TCCAAGGTGATGGTCTTGCCAGTCAATGTCTTCACAAAGATCTGCAT 242136172 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| || || | || | |||||| || || |||||||| || || || || || || Sbjct 242135718 CATGCCACCCCTGAGACGCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTC 242135659 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 |||||| || || |||| || ||||| ||||| ||||| || || ||||||||||| | Sbjct 242135658 GGCAAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAAATGAGCCGCTGCTGGTCCGG 242135599 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233 || | || ||| |||||| ||| || |||| | | | ||||| ||||| Sbjct 242135598 AGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTATCAGAAGACTC 242135539 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || | |||||| | || || ||||| || || || ||||| ||||| Sbjct 242135538 GACCTCAAGGGTGATAGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 242135488 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| || || | || | |||||| || || |||||||| || || || || ||||| Sbjct 242135946 CATGCCACCCCTGAGACGCAGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATC 242135887 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 ||||| || || | || || ||||| ||||| ||||| || || ||||||||||| | Sbjct 242135886 TGCAAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGCCGCTGCTGGTCCGG 242135827 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233 || | || ||| |||||| ||| || |||| | | | || || ||||| Sbjct 242135826 TGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAGGACTC 242135767 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||| || | ||||| | || || || || || || || ||||| ||||| Sbjct 242135766 CACCTCAAGGGTGATCGTCTTGCCAGTAAGTGTCTTCACGAAGATCTGCAT 242135716 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || |||||||| || || || || || || || || || || | Sbjct 242136615 GCGGAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCTGCTAGGGTGCGGCC 242136556 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || || ||||| ||||| || || || |||||||||||||| | ||| | || |||||| Sbjct 242136555 ATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCTTT 242136496 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||| || | ||| | | | || ||| ||| || |||| || | Sbjct 242136495 GTCCTGGATCTTCGCCTTCA-CGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAGGGTTA 242136437 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || || |||| || || |||||||| ||||| Sbjct 242136436 TGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 242136400 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| || || | ||| | |||||| || || |||||||| || || || || || || Sbjct 242136174 CATGCCACCCCTGAGGCGGAGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTC 242136115 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 || | || || | || || ||||| ||||| || || || || ||||||||||| | Sbjct 242136114 AGCCAAGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCCGG 242136055 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACT 39232 || | || ||| |||||| ||| || |||| ||| | | | || || |||| Sbjct 242136054 TGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCTGAGGACT 242135996 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| || | ||||| | || || || || || || || ||||| ||||| Sbjct 242135995 CCACCTCAAGGGTGATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 242135944 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| || || |||||||| || || ||||| || || ||||| || || | || || Sbjct 242113819 CACCAGGTGGAGGGTGCTCTCCTTCTGGATATTGTAGTCTGCAAGGGTGCGACCATCCTC 242113760 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||| || || || |||||||||||||| | ||| | | ||| |||||| Sbjct 242113759 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTG 242113700 Query 39195 GATTTT 39200 ||| || Sbjct 242113699 GATCTT 242113694 >seq8 Length=181122637 Score = 109 bits (120), Expect = 5e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116 |||||| || | ||| | ||||| || ||||| ||| || || || || || ||||| Sbjct 40272256 GCCTCCCCTGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 40272197 Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGG 39176 || || || | || || ||||||||||| || || || || ||||||||||| | || Sbjct 40272196 GAGGGTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 40272137 Query 39177 CACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCA 39235 | || ||| |||||| ||| || || | ||| | | | || || ||||||| Sbjct 40272136 GATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCA 40272078 Query 39236 CGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 | |||| |||||| | || |||||||| || || || ||||| |||||||| Sbjct 40272077 CCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 40272026 >seq6 Length=174033170 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| ||| || || || || || ||||| || || || | Sbjct 129161957 GCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGACC 129162016 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || || || ||||||||||| | ||| | || ||| || Sbjct 129162017 GTCCTCGAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGGGGGATGCCCTCCTT 129162076 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| || || | | | | || ||| |||||||| |||| ||||| Sbjct 129162077 GTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCGGAGGACTCCACCTCCAAAGTGAT 129162136 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTACGCCGA 39295 | || |||||||| || || |||||||| |||||||| || ||| Sbjct 129162137 GGTCTTCCCCGTCAGAGTCTTCACAAAGATCTGCATCTTGGCGGCGA 129162183 >seq9 Length=159769782 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/208 (69%), Gaps = 6/208 (3%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| | | || |||| || ||||| Sbjct 19195251 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGATGCGGCCGTCGTCCAGCTGC 19195310 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||| | || | || ||| |||||| ||| || Sbjct 19195311 TTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTG 19195370 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 |||| || | ||||| || ||| |||||| |||| ||||| || || || Sbjct 19195371 GCCTTGACGTTCTCGACCGTGTCCGAGCT---CTCCACCTCCAGGGTGATGCTCTTGCCG 19195427 Query 39259 GTCAGCGTTTTAACAAAGATTTGCATCT 39286 | || || || || ||||| ||||||| Sbjct 19195428 GCGAGGGTCTTCACGAAGATCTGCATCT 19195455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429544202231771