Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zizania_20latifolia_20[genbank_20GCA_5F000418225.1_202013-07-09] 4,522 sequences; 603,989,347 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq2624 123 3e-23 seq891 122 1e-22 seq4197 120 3e-22 seq3577 118 1e-21 seq192 109 6e-19 seq4294 107 2e-18 seq2778 104 3e-17 seq4493 102 9e-17 seq1848 102 9e-17 seq1148 87.8 2e-12 seq3762 86.0 7e-12 >seq2624 Length=565299 Score = 123 bits (136), Expect = 3e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 || ||||| || | ||| |||||| || || ||||| |||||||| || || |||| Sbjct 25325 CAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTC 25384 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || |||||||| |||||||| ||||| ||||||||||| | || | || ||||||||| Sbjct 25385 CTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 25444 Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150 | ||| || || | | | | |||||| || || || || | |||||||| Sbjct 25445 CTGGATCTTGGCCTTCACATTGTCGATCGTGTCTGAGGACTCAACCTCAAGGGTGATGGT 25504 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || || ||||| |||||||| ||||| Sbjct 25505 CTTGCCGGTCAGGGTCTTGACAAAGATCTGCAT 25537 Score = 116 bits (128), Expect = 4e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||| | ||| | ||| |||||| ||||| |||||||||||||| || || | || || Sbjct 25556 CACAAGATGGAGTGTAGACTCCTTCTGAATGTTGTAATCAGCCAGGGTGCGGCCATCCTC 25615 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| ||||| || ||||| ||||||||||| | || | | |||||||||| Sbjct 25616 CAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTG 25675 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || || | ||| | | | |||||| ||||| || || | ||| || || | Sbjct 25676 GATCTTAGCCTTCA-CGTTGTCGATCGTGTCTGAGGATTCGACCTCAAGCGTAATTGTCT 25734 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || | ||||| |||||||| ||||| Sbjct 25735 TGCCGGTCAAGGTCTTGACAAAGATCTGCAT 25765 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || | || || |||||||| || || || Sbjct 26030 CTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAA 26089 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 26090 AATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGA-CGT 26148 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || || || |||| |||||||| ||||| || || ||||| | Sbjct 26149 TGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGTGTCTTCA 26208 Query 43171 CAAAGATTTGCAT 43183 ||||||| ||||| Sbjct 26209 CAAAGATCTGCAT 26221 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || | || || |||||||| ||||| || Sbjct 25118 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAA 25177 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | || |||||||||| ||| || || | ||| Sbjct 25178 AATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 25236 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| || || || || | |||||||| ||||| || | ||||| | Sbjct 25237 TGTCAATCGTGTCAGATGACTCGACCTCAAGAGTGATGGTCTTGCCAGTCAATGTCTTGA 25296 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 25297 CGAAGATCTGCAT 25309 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || | || || | |||||| |||||||| Sbjct 25802 CTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAA 25861 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| ||| || || | | Sbjct 25862 GATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTAGCCTTCACATT 25921 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| || || || || | ||||||||| ||||| || | ||||| || Sbjct 25922 GTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCAGTCAAGGTCTTGAC 25981 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 25982 GAAGATCTGCAT 25993 >seq891 Length=1582050 Score = 122 bits (134), Expect = 1e-22 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| |||| ||| |||||| || || ||||| || || || || || | || || Sbjct 1149484 CACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTC 1149543 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| ||||| ||||||||||| | ||| | || |||||||||| Sbjct 1149544 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 1149603 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || || | ||| | | | ||||| || ||||| || | ||||||||| | Sbjct 1149604 GATCTTGGCCTTCA-CGTTGTCGATGGTGTCAGAGGACTCCACCTCCAACGTGATGGTCT 1149662 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 ||||||| || ||||| || ||||| ||||| || Sbjct 1149663 TGCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 1149696 >seq4197 Length=262831 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || | || || |||||||| |||||||| Sbjct 75874 CTCCTTCTGGATGTTGTAGTCGGCCAGTGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 75815 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 75814 GATGAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGA-CGT 75756 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || || || |||| |||||||| ||||| || || ||||| | Sbjct 75755 TGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGTGTCTTCA 75696 Query 43171 CAAAGATTTGCAT 43183 ||||||| ||||| Sbjct 75695 CAAAGATCTGCAT 75683 Score = 109 bits (120), Expect = 6e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||| || | ||| |||||| || ||||||||||| || || || || | Sbjct 76810 ACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCCGCAAGGGTGCGGCC 76751 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||||||||| || || || ||||||||||| | || | || |||||| Sbjct 76750 ATCCTCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTT 76691 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 ||| ||| || || | ||| | | | ||||| ||| || || || | |||| Sbjct 76690 GTCTTGGATCTTGGCCTTCA-CGTTGTCAATTGTGTCAGACGACTCAACCTCCAGGGTGA 76632 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | |||||||| || | ||||| |||||||| ||||| Sbjct 76631 TTGTTTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 76595 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || || || | || || |||||||| ||||| || Sbjct 76558 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAA 76499 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 76498 GATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 76439 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| || || || || | |||||||| ||||| || || ||||| || Sbjct 76438 GTCAATTGTGTCTGATGACTCAACCTCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTGAC 76379 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 76378 AAAGATCTGCAT 76367 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| |||||||| || || | || || ||||| || || || || Sbjct 76102 CTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCAAGCTGTTTGCCTGCAAA 76043 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| ||| || |||| ||| Sbjct 76042 GATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTAGCCTTGA-CGT 75984 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || || || || | |||||||| ||||| || | ||||| | Sbjct 75983 TGTCAATGGTGTCCGAGGACTCAACCTCCAGGGTGATGGTCTTGCCAGTCAAGGTCTTCA 75924 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 75923 CGAAGATCTGCAT 75911 >seq3577 Length=483236 Score = 118 bits (130), Expect = 1e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| || | ||| |||||| || || ||||| || || || || || | || || Sbjct 183934 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTC 183875 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| ||||| ||||||||||| | ||| | || |||||||||| Sbjct 183874 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 183815 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || || | ||| | | | ||||| || ||||| || | ||||||||| | Sbjct 183814 GATCTTGGCCTTCA-CGTTGTCGATGGTGTCTGAGGACTCCACCTCCAACGTGATGGTCT 183756 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 ||||||| || ||||| || ||||| ||||| || Sbjct 183755 TGCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 183722 >seq192 Length=981986 Score = 109 bits (120), Expect = 6e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| |||| || |||||| || || || || || || || || || | || || Sbjct 849006 CACCAGGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGCGAGCGTTCGTCCATCCTC 848947 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| ||||| ||||||||||| | ||| | || |||||||||| Sbjct 848946 CAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 848887 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || || | ||| | | | ||||| || ||||| || | ||||||||| | Sbjct 848886 GATCTTGGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCT 848828 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 | ||||| || ||||| || ||||| ||||| || Sbjct 848827 TCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 848794 >seq4294 Length=230714 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || | || || |||||||| || ||||| Sbjct 45171 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGTCCATCTTCCAGCTGCTTGCCGGCGAA 45112 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | ||| | || |||||||||| ||| || || | ||| Sbjct 45111 GATGAGACGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 45053 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || ||||| || | ||||||||| || || || || ||||| | Sbjct 45052 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCTGTCAGGGTCTTCA 44993 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 44992 CGAAGATCTGCAT 44980 >seq2778 Length=1391004 Score = 104 bits (114), Expect = 3e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| || || | ||||| || | || | ||| |||||| || || ||||| || || Sbjct 174229 TCCACCCCTGAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 174288 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || |||| | || || |||||||| ||||| || ||||| ||||||||||| | || Sbjct 174289 AAGGGTCCTGCCATCCTCCAGCTGCTTTCCAGCAAAGATGAGGCGCTGCTGGTCTGGGGG 174348 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 43134 | || |||||||||| ||| | || | | ||| | | | |||||| || || | Sbjct 174349 AATGCCCTCCTTGTCC-TGAATCTTGGCCTTCACGTTGTCAATCGTGTCTGATGACTCAA 174407 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || | |||||||| ||||| || || ||||| || ||||| ||||| Sbjct 174408 CCTCAAGTGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 174456 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/196 (71%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || |||| | || ||||||||||| |||||||| Sbjct 174037 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCTAGCTGCTTGCCAGCGAA 174096 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| || | || |||||||||| ||| || || | | Sbjct 174097 GATGAGACGCTGCTGGTCTAGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 174156 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| || || || | || || |||||||| || || ||||| Sbjct 174157 GTCGATGGTGTCAGAGCTC---TCAACCTCCAGGGTAATAGTTTTGCCAGTGAGAGTCTT 174213 Query 43169 TACAAAGATTTGCATT 43184 ||||| || |||||| Sbjct 174214 GACAAAAATCTGCATT 174229 Score = 98.7 bits (108), Expect = 1e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 43005 TTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGC 43064 ||||| ||||| || |||| | || || || ||||| ||||| || ||||| |||||| Sbjct 175101 TTGTAGTCAGCAAGGGTCCTGCCATCCTCAAGTTGCTTGCCAGCAAAGATGAGACGCTGC 175160 Query 43065 TGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCG 43124 ||||||| || | || |||||||||| ||| ||| |||| | | | || || Sbjct 175161 TGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTGTCAATGGTATCA 175220 Query 43125 CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| |||| ||||| || ||||| || | ||||| || ||||||||||| Sbjct 175221 GAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCAT 175279 Score = 89.7 bits (98), Expect = 6e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 |||||||| |||||||| ||||| || |||| | || || || ||||| ||||| || Sbjct 174494 TCCTTTTGGATATTGTAGTCAGCAAGGGTCCTGCCATCCTCAAGTTGCTTGCCAGCAAAG 174553 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 ||||| ||||||||||||| || | || |||||||||| ||| || Sbjct 174554 ATGAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTT 174600 >seq4493 Length=164055 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || || || | || || |||||||| || || || Sbjct 95939 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAA 95880 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| ||| || |||| ||| Sbjct 95879 GATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTAGCCTTGA-CGT 95821 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || ||||| |||| ||||| || ||||| || || ||||| | Sbjct 95820 TGTCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTCAGAGTCTTGA 95761 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 95760 CGAAGATCTGCAT 95748 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| ||||||| | || || |||||||| || || || Sbjct 96167 CTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTGCCATCCTCCAGCTGCTTGCCGGCAAA 96108 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | || ||||||||| ||| || |||| | Sbjct 96107 GATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATT 96048 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| || ||||| || | ||||| || ||||| || | ||||| || Sbjct 96047 GTCAATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCAGTCAATGTCTTCAC 95988 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 95987 AAAGATCTGCAT 95976 >seq1848 Length=11040 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| || ||||| || || | || || |||||||| || ||||| Sbjct 6280 TCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAG 6221 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 6220 ATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTA 6161 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | |||||| || ||||| || | ||||| || ||||| || | ||||| ||| Sbjct 6160 TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCAGTCAAAGTCTTCACA 6101 Query 43173 AAGATTTGCAT 43183 || || ||||| Sbjct 6100 AAAATCTGCAT 6090 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || | || || ||||| || |||||||| Sbjct 5597 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCCAGCTGTTTGCCAGCGAA 5538 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||| ||| ||| || ||||| ||| Sbjct 5537 GATGAGACGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGGATCTTAGCTTTGA-CGT 5479 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || ||||| |||| ||||| || ||||| || | ||||| | Sbjct 5478 TGTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTTCA 5419 Query 43171 CAAAGATTTGCAT 43183 |||| || ||||| Sbjct 5418 CAAAAATCTGCAT 5406 >seq1148 Length=724074 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 43014 GCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCC 43073 ||||| | || |||| || |||| ||| || ||||| ||||| ||||||||||| | | Sbjct 119771 GCCAGCATGCGGACGTCCTCCAGCTACTTCCCGGCGAAGATGAGCCGCTGCTGGTCCGGC 119830 Query 43074 GGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCC 43133 || | | |||||||||| ||| || || | || |||||||||| || ||| Sbjct 119831 GGGATCCCCTCCTTGTCCTGGATCTTCGACTTCACGTTCTCCACCGTGTCCGACGGCTCC 119890 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTACGCCG 43193 || || | | | || ||||| || |||||||| || ||||| ||||| || | ||| Sbjct 119891 ACCTCCAGGATCACCGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCATCTTGGCTCCG 119950 Query 43194 A 43194 | Sbjct 119951 A 119951 >seq3762 Length=1354040 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||| || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 472353 AAAAGTTTTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 472294 Query 60117 TCACCACTATACTAC 60131 ||||||||||||||| Sbjct 472293 TCACCACTATACTAC 472279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571785278010160