Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zizania_20latifolia_20[genbank_20GCA_5F000418225.1_202013-07-09] 4,522 sequences; 603,989,347 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq4282 82.4 6e-11 >seq4282 Length=242231 Score = 82.4 bits (90), Expect = 6e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 20458 TCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCA 20517 || || || ||||||||||| || || ||||||||||| |||||||| ||||| |||||| Sbjct 169762 TCATGCCAGATGTATCAACGCTCTGCAGATATGGGACTTGGTGTTCCATTCAACATTGCA 169703 Query 20518 AGTTATGCGCTGCTTACGTATATGATTGCACATGT 20552 ||| | || || || || |||||||| || || Sbjct 169702 TCATATTCTCTTCTGACATACATGATTGCTCAAGT 169668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399162000221290