Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zizania_20latifolia_20[genbank_20GCA_5F000418225.1_202013-07-09] 4,522 sequences; 603,989,347 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq348 84.2 2e-11 >seq348 Length=941607 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 || ||||| || | ||| ||||||||||| || |||| ||| || || ||||| ||| Sbjct 469939 GACAAAGAGGGTATTCCCCCAGATCAGCAAAGGCTGATTTTTGCAGGGAAGCAATTGGAA 469998 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| | || | || ||||| |||||||| |||||||| ||| | ||| |||| || Sbjct 469999 GATGGGCACACATTAGCTGATTACAACATTCAGAAAGAGTCCACTCTCCATTTGGTCCTG 470058 Query 115499 AGATTGCGAGGAGGAA 115514 || | |||| |||| Sbjct 470059 AGGCTCAGAGGTGGAA 470074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425320558494640