Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zizania_20latifolia_20[genbank_20GCA_5F000418225.1_202013-07-09] 4,522 sequences; 603,989,347 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq2624 131 1e-25 seq4197 114 1e-20 seq891 113 4e-20 seq4493 107 2e-18 seq3577 104 2e-17 seq2778 96.9 3e-15 seq1848 95.1 1e-14 seq4294 93.3 3e-14 seq2570 84.2 2e-11 >seq2624 Length=565299 Score = 131 bits (144), Expect = 1e-25 Identities = 162/220 (74%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 |||||||| |||| || || ||||||||||| || ||||||||||| |||| ||| | Sbjct 25320 AGCCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGG 25379 Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837 ||||||| | || ||||| || |||| || ||||| |||||| || | |||||| Sbjct 25380 CCGTCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGGGGGATGCCCTCC 25439 Query 16838 TTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGG 16895 ||||| || || || |||||| | | | | ||||| || ||| || | || Sbjct 25440 TTGTCCTGGATCTTGGC--CTTCACATTGTCGATCGTGTCTGAGGACTCAACCTCAAGGG 25497 Query 16896 TGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||||| || |||||||| || |||||||| |||||||| Sbjct 25498 TGATGGTCTTGCCGGTCAGGGTCTTGACAAAGATCTGCAT 25537 Score = 116 bits (128), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 |||||||| ||||| || || | || || ||||||||||| || ||||||||||| || Sbjct 25994 CCCTCCTCTGAGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGC 26053 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || ||| | | ||||||| || ||||| ||| |||| || ||||| ||||| || Sbjct 26054 CAGGGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAAATCAGACGCTGCTGGTCTGGGGG 26113 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | |||||| ||||| || || || ||| || | | | | ||||| || ||| Sbjct 26114 AATGCCCTCCTTGTCCTGGATCTTAGC--CTTGACGTTGTCGATGGTGTCCGAGGACTCA 26171 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || ||||| || || || ||||| |||||||| Sbjct 26172 ACCTCGAGGGTGATGGTCTTGCCGGTGAGTGTCTTCACAAAGATCTGCAT 26221 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| | ||||| || || | || || ||||||||||| || ||||||||||| ||| Sbjct 25767 CCTCCCCTGAGCCTGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCC 25826 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | |||||||| || ||||| || | || || ||||| |||||| ||| Sbjct 25827 AGGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 25886 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || || || |||||| | | | | ||||| || ||| Sbjct 25887 ATACCCTCCTTGTCCTGGATCTTAGC--CTTCACATTGTCGATCGTGTCCGAGGACTCGA 25944 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || || |||| || ||||| || |||||||| Sbjct 25945 CCTCAAGCGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 25993 Score = 102 bits (112), Expect = 7e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || |||||||||||||||| ||| | | ||| Sbjct 25098 AGCACCAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCC 25157 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| ||| |||| || ||||| |||||| || | |||||| ||||| Sbjct 25158 TCCAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 25217 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||| | ||| || | ||||||| Sbjct 25218 TGGATCTTGGC--CTTCACGTTGTCAATCGTGTCAGATGACTCGACCTCAAGAGTGATGG 25275 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || |||| || ||||| || |||||||| Sbjct 25276 TCTTGCCAGTCAATGTCTTGACGAAGATCTGCAT 25309 >seq4197 Length=262831 Score = 114 bits (126), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| | ||||| ||||| | || || ||||||||||| || ||||||||||||||| Sbjct 76365 CCTCCCCTGAGCCTAAGTACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 76306 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||| | || ||||| || | || || ||||||||||| || Sbjct 76305 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGGTCTGGGGGG 76246 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || || || |||||| | | | | ||||| || ||| Sbjct 76245 ATACCCTCCTTGTCCTGGATCTTAGC--CTTCACATTGTCGATCGTGTCCGAGGACTCGA 76188 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || || ||||| || ||||||||||||||||| Sbjct 76187 CCTCAAGTGTGATGGTCTTGCCAGTCAGGGTCTTGACAAAAATCTGCAT 76139 Score = 113 bits (124), Expect = 4e-20 Identities = 158/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 ||||| || |||| || || ||||||||||| || ||||||||||| || | ||| | Sbjct 76584 AGCCTGAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGG 76525 Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837 | ||||| | || ||||| ||| | || || ||||| |||||| || | |||||| Sbjct 76524 CCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCC 76465 Query 16838 TTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGG 16895 ||||| || || || |||||| | | | | ||||| | ||| || | || Sbjct 76464 TTGTCCTGGATCTTGGC--CTTCACATTGTCAATTGTGTCTGATGACTCAACCTCAAGGG 76407 Query 16896 TGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||||| || |||||||| || |||||||| |||||||| Sbjct 76406 TGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 76367 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 |||||| | ||||| || || | || || || |||||||| || ||||||||||| || Sbjct 76138 CCCTCCCCTGAGCCTGAGGACAAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGC 76079 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || ||| | | ||||| | |||||||| ||| | || || ||||| |||||| || Sbjct 76078 CAGGGTGCGGCCATCCTCAAGCTGTTTGCCTGCAAAGATGAGACGCTGCTGGTCCGGGGG 76019 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||||| ||||| || || || ||| || | | | | ||||| || ||| Sbjct 76018 GATACCCTCCTTGTCCTGGATCTTAGC--CTTGACGTTGTCAATGGTGTCCGAGGACTCA 75961 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||||| || || |||| || || || || |||||||| Sbjct 75960 ACCTCCAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 75911 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| | ||||| || || | || || ||||||||||| || ||||||||||||||| Sbjct 75909 CCTCCCCTGAGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 75850 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | ||||| | || ||||| || | || || ||||| ||||| || Sbjct 75849 AGTGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGA 75790 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || ||| || | | | | ||||| || ||| Sbjct 75789 ATGCCCTCCTTGTCCTGGATCTTAGC--CTTGACGTTGTCAATGGTGTCCGAGGACTCAA 75732 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || ||||| || || || ||||| |||||||| Sbjct 75731 CCTCGAGGGTGATGGTCTTGCCGGTGAGTGTCTTCACAAAGATCTGCAT 75683 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 16706 TACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCG 16765 || || || || || | || |||| || || ||||||||||| || || ||||| || Sbjct 76824 TAGCCACCACGGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCC 76765 Query 16766 GCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACA 16825 || | ||| | | ||||| | || || || ||| | || || ||||| |||||| Sbjct 76764 GCAAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGG 76705 Query 16826 GGCACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCT 16883 || | |||||| ||||| || || || |||||| | | | | ||||| | || Sbjct 76704 GGGATGCCCTCCTTGTCTTGGATCTTGGC--CTTCACGTTGTCAATTGTGTCAGACGACT 76647 Query 16884 CCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | |||| |||||| ||||| ||||||| || || ||||| |||||||| Sbjct 76646 CAACCTCCAGGGTGATTGTTTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 76595 >seq891 Length=1582050 Score = 113 bits (124), Expect = 4e-20 Identities = 157/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||||||||||||||| || |||||||||||||| | ||| | | ||| Sbjct 1149482 AGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCC 1149541 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || ||||| || | || || ||||| |||||| || | |||||| ||||| Sbjct 1149542 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 1149601 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||| || |||| |||| ||||||| Sbjct 1149602 TGGATCTTGGC--CTTCACGTTGTCGATGGTGTCAGAGGACTCCACCTCCAACGTGATGG 1149659 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 | || || ||||| || || || || |||||||| ||| Sbjct 1149660 TCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 1149697 >seq4493 Length=164055 Score = 107 bits (118), Expect = 2e-18 Identities = 148/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||| || | ||| || ||||||||| || Sbjct 95722 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCCAGCTGC 95663 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| ||| | ||||| ||||| || || || | |||||| ||||| || || Sbjct 95662 TTGCCAGCAAAGATAAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTA 95603 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | ||||| || |||| || | |||||| || || |||| Sbjct 95602 GC--CTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCGG 95545 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 ||| || || |||||||||||||| Sbjct 95544 TCAATGTCTTCACAAAAATCTGCAT 95520 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||| || | || || | ||||||| || Sbjct 96178 TGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTGCCATCCTCCAGCTGC 96119 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| ||| | ||||| ||||| ||||| || | |||||| ||||| || || Sbjct 96118 TTGCCGGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTG 96059 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | ||||| || |||| || | |||||| || || || | Sbjct 96058 GC--CTTGACATTGTCAATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCAG 96001 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 ||| || || ||||| |||||||| Sbjct 96000 TCAATGTCTTCACAAAGATCTGCAT 95976 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || || |||||||| || ||||||||||| || | ||| | | || Sbjct 95959 AGGACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCT 95900 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| ||| | || || ||||| |||||| || | ||||| ||||| Sbjct 95899 TCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 95840 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | | ||||| | |||| || | |||||| | Sbjct 95839 TGGATCTTAGC--CTTGACGTTGTCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATAG 95782 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || ||||| || ||||| || |||||||| Sbjct 95781 TCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 95748 >seq3577 Length=483236 Score = 104 bits (114), Expect = 2e-17 Identities = 155/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || |||||||||||||| | ||| | | ||| Sbjct 183936 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCC 183877 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || ||||| || | || || ||||| |||||| || | |||||| ||||| Sbjct 183876 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 183817 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||| || |||| |||| ||||||| Sbjct 183816 TGGATCTTGGC--CTTCACGTTGTCGATGGTGTCTGAGGACTCCACCTCCAACGTGATGG 183759 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 | || || ||||| || || || || |||||||| ||| Sbjct 183758 TCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 183721 >seq2778 Length=1391004 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || ||||||||||| || | ||| | | ||| Sbjct 174017 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCC 174076 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || ||||| || | || || ||||| ||||| | || | |||||| ||||| Sbjct 174077 TCTAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTAGGGGAATGCCCTCCTTGTCC 174136 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | | |||||| | | | | ||||| | ||| |||| ||| || ||| Sbjct 174137 TGGATCTTCGCCTTCACATTGTCGATGGTGTCAGAGCTCTCAACCTCCAGGGTAATAGTT 174196 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || || || || || |||||||||||||||||| Sbjct 174197 TTGCCAGTGAGAGTCTTGACAAAAATCTGCATT 174229 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || |||||||||||||| | ||| || | ||||||| || Sbjct 174254 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATCCTCCAGCTGC 174313 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || ||| | || || ||||| ||||| || | |||||| ||||| ||| | Sbjct 174314 TTTCCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTG 174373 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | | ||||| | ||| || | |||||||| || || || Sbjct 174374 GCCTTCACGTTGTCAATCGTGTCTGATGACTCAACCTCAAGTGTGATGGTCTTGCCAGTG 174433 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || || || || |||||||| Sbjct 174434 AGAGTCTTAACGAAGATCTGCAT 174456 >seq1848 Length=11040 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || |||||||||||||| | ||| | | ||||||| ||| Sbjct 5608 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCCAGCTGT 5549 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| || | || || ||||| ||||| || | ||||| || || || || Sbjct 5548 TTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGGATCTTA 5489 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 ||| || || | | | | ||||| || |||| || | |||||| || || |||| Sbjct 5488 GCT--TTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGG 5431 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 ||| || || |||||||||||||| Sbjct 5430 TCAATGTCTTCACAAAAATCTGCAT 5406 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 |||| || |||||||| || |||||||||||||| | ||| || | ||||||| || Sbjct 6064 TGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCTGCCATCCTCCAGCTGC 6005 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| ||| | || | || || |||||| ||| | |||||| ||||| || || Sbjct 6004 TTGCCGGCAAAGATCAAACGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTG 5945 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | |||||| | ||| || | |||||||| || |||| Sbjct 5944 GC--CTTGACGTTGTCAATGGTGTCGGAAGACTCTACCTCAAGAGTGATGGTCTTGCCGG 5887 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || || || || |||||||| Sbjct 5886 TCAGAGTCTTCACGAAGATCTGCAT 5862 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||| ||||| || ||||||||||| |||| ||| | | ||| Sbjct 6301 AGCACCAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCC 6242 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| || | || || ||||| |||||| || | |||||| ||||| Sbjct 6241 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 6182 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | |||||| | |||| || | |||||| | Sbjct 6181 TGGATCTTGGC--CTTGACATTATCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAG 6124 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || |||| || || |||||||||||||| Sbjct 6123 TCTTGCCAGTCAAAGTCTTCACAAAAATCTGCAT 6090 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||| | ||| | ||||||||| || Sbjct 5836 TGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCCAGCTGC 5777 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| ||| | || | || || |||||| || | ||||| ||||| || || Sbjct 5776 TTGCCGGCAAAGATCAAGCGTTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTG 5717 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | |||||| | |||| || | ||||| || || |||| Sbjct 5716 GC--CTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGAGTGATAGTCTTGCCGG 5659 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || ||||| || |||||||| Sbjct 5658 TCAGAGTCTTGACGAAGATCTGCAT 5634 >seq4294 Length=230714 Score = 93.3 bits (102), Expect = 3e-14 Identities = 153/218 (70%), Gaps = 12/218 (6%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| || |||||||| || |||||||||||||| | || |||||| Sbjct 45191 AGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGT----GCGTCC 45136 Query 16784 ----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTT 16839 |||| || ||||| || | || || ||||| |||||| || | |||||| || Sbjct 45135 ATCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGAATGCCCTCCTT 45076 Query 16840 GTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTG 16897 ||| || || || |||||| | | | | ||||| || |||| |||| ||| Sbjct 45075 GTCCTGGATCTTGGC--CTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTG 45018 Query 16898 ATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || ||||| || || || || |||||||| Sbjct 45017 ATGGTCTTCCCTGTCAGGGTCTTCACGAAGATCTGCAT 44980 >seq2570 Length=608568 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || ||||| || || | || |||||||||||||| || ||||||||||| ||| Sbjct 261063 CCTCCGCGAAGCCTGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCC 261004 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCC 16822 | ||| ||||||||| || ||||| || | || |||||||| || ||| Sbjct 261003 AGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGATCC 260950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405065674840780