Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zizania_20latifolia_20[genbank_20GCA_5F000418225.1_202013-07-09] 4,522 sequences; 603,989,347 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq4 159 3e-34 seq603 125 7e-24 seq4493 109 5e-19 seq1848 105 7e-18 seq4197 102 8e-17 seq4294 96.9 3e-15 seq3577 93.3 4e-14 seq891 93.3 4e-14 seq2778 91.5 1e-13 seq2624 91.5 1e-13 seq192 89.7 5e-13 >seq4 Length=1057841 Score = 159 bits (176), Expect = 3e-34 Identities = 346/501 (69%), Gaps = 20/501 (4%) Strand=Plus/Minus Query 52344 AAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGAC-ACCGCCACGCTGGCCGAGCGCAT 52402 ||||| ||||||| ||| |||||||| ||| | | ||| ||| ||||||| | Sbjct 125575 AAGGCCGAGTGGGCCATGCGCTGGATCGACGGCGGCGAGCGCTTCGC----CGAGCGCCT 125520 Query 52403 GGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTA 52462 || || |||||| ||||||||| | || || || ||| ||| ||||||||||| Sbjct 125519 CGTTGCTTTCGCCTGCGTCGAGGGCATCTTCTTCTCGGGCTCCTTCTGCGCCATCTTTTG 125460 Query 52463 CATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGA 52522 |||| | | ||| | ||||| || || || ||| ||||||| | || || ||||| Sbjct 125459 GCTTAAGAAGCGCGGCCTCATGCCGGGTCTTACCTTCTCCAACGAGCTCATCTCCCGCGA 125400 Query 52523 CGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATT 52582 ||| || |||||| ||||| || |||||| |||| ||| | | | || || | Sbjct 125399 CGAGGGCCTGCACTGCGACTTCGCATGCCTCCTCTAC--GAC-CTCCTCCGCGGCAAGCT 125343 Query 52583 GGATTCGGACACG-ATCC-TGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTT 52640 || | ||| || ||| ||| || || || || || | ||||||| |||||| Sbjct 125342 CGA-TGAGACCCGCGTCCGCGAG-ATCGTCGTTGACGCCGTCGACATCGAAAGGGAGTTC 125285 Query 52641 TTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCC--ATGTGCGAGT 52698 | | |||||| || |||| || | |||||||| || ||||| ||| || ||| Sbjct 125284 GTCTGCGACGCGCTCCCCGTCGCTCTCGTCGGCATGAA--CGGAGTCCTGATGAGCCAGT 125227 Query 52699 ACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTCAAC 52757 | |||||||| || || || || ||| | || |||| ||| || | ||| | |||| Sbjct 125226 ATATCGAGTTCGTCGCCGACCGCCTGCTCATGGCGCTC-GGCTGCAAGAAGATGTACAAC 125168 Query 52758 GCTCG-CAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTT 52816 | ||| |||||| || || | ||| | ||| || || |||| ||||||||||| || Sbjct 125167 G-TCGCCAATCCCTTCGACTGGATGGAGCTCATCTCCCTGCAGGGAAAGACCAACTTCTT 125109 Query 52817 CGAGAAGCGAGTCGGCGAGTA 52837 ||||||||| |||||||| || Sbjct 125108 CGAGAAGCGCGTCGGCGACTA 125088 >seq603 Length=994148 Score = 125 bits (138), Expect = 7e-24 Identities = 301/448 (67%), Gaps = 7/448 (2%) Strand=Plus/Minus Query 52392 GCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCC 52451 ||||||||| | || ||||||||| ||||||||| | ||||| || || ||| | Sbjct 841932 GCCGAGCGCCTAGTCGCCTTCGCCTGCGTCGAGGGCATCTTTTTCTCGGGATCCTTCTGC 841873 Query 52452 GCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTG 52511 |||||||| | | || | | ||| | ||||| ||||| || ||| ||||||| | Sbjct 841872 GCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCGGGCCTCACCTTCTCCAACGAGCTC 841813 Query 52512 ATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTG 52571 || || |||||||| || |||||| ||||| || |||||| |||| ||| | | | Sbjct 841812 ATCTCCCGCGACGAGGGCCTGCACTGCGACTTCGCCTGCCTCCTCTAC--GAC-CTCCTC 841756 Query 52572 ACCGAAAAATTGGATTCGGACACGATCCTGAGCA-TGTTCAAGGAGGCGGTGGCTATCGA 52630 || || | || || | ||| | ||| | || || || || | ||||| Sbjct 841755 CGCGGCAAGCTTGACGAGGCCCGCGTCC-GTGCAATCGTCGCCGAAGCCGTCGACATCGA 841697 Query 52631 AAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCAT 52690 | | | || | | ||| || || |||| ||| | |||||||||| | ||| Sbjct 841696 GAGGAACTTCGTCTGCGACGCTCTCCCCGTCGCGCTCGTCGGCATGAACGGCGACCTCAT 841637 Query 52691 GTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGT 52749 | || ||||||||||||| || || || || || | || |||||| | || | ||| Sbjct 841636 GAGCCAGTACATCGAGTTCGTCGCTGACCGCCTCCTAATGGCGCTCGG-CTGCAAGAAGA 841578 Query 52750 ACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCA 52809 | ||||| ||| || || || | ||| | ||| || || |||||||||||| Sbjct 841577 TGTACAACGTCACCAACCCCTTCGACTGGATGGAGCTCATCTCCCTGCAGGGCAAGACCA 841518 Query 52810 ACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 | || ||||||||||| |||||||| || Sbjct 841517 ATTTCTTCGAGAAGCGCGTCGGCGACTA 841490 >seq4493 Length=164055 Score = 109 bits (120), Expect = 5e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 138411 ATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTG 138470 ||| | | |||||||||| || ||||||||||| | || || || || || || Sbjct 95951 ATGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCTTCCAGCTG 95892 Query 138471 TTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTT 138530 || |||| | |||| |||||||| |||||||| || ||||| || ||||| ||| || Sbjct 95891 CTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTT 95832 Query 138531 TTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGT 138590 || | | || | |||||| | ||||||||||||| || | || || ||||| Sbjct 95831 AGCCTTGACGTTGTCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGT 95772 Query 138591 CAGAGTTTTTACAAAAATCTGCATGGCT 138618 |||||| || || || ||||||||| || Sbjct 95771 CAGAGTCTTGACGAAGATCTGCATGCCT 95744 Score = 102 bits (112), Expect = 8e-17 Identities = 147/202 (73%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGTCCTCGAGTTGTTTACCG 138477 |||||||||| || ||||||||||| | ||| | || | ||||| || || || ||| Sbjct 96171 TTGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTGCCA-TCCTCCAGCTGCTTGCCG 96113 Query 138478 GAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT 138537 | | |||| |||||||| ||||| || || || || || ||||| ||| || || Sbjct 96112 GCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTG 96053 Query 138538 A-ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596 | ||||| | | |||||| | ||||||||||| | || | || || ||||||| || Sbjct 96052 ACATTGT-CAATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCAGTCAATGT 95994 Query 138597 TTTTACAAAAATCTGCATGGCT 138618 || ||||| ||||||||| || Sbjct 95993 CTTCACAAAGATCTGCATGCCT 95972 >seq1848 Length=11040 Score = 105 bits (116), Expect = 7e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || ||||||||||| || || || ||||| || || || |||| Sbjct 6283 GATTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCG 6224 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| |||||||| || || || || ||||| ||| || || | Sbjct 6223 AAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 6164 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||||||||| | || | || || ||||||| ||| || Sbjct 6163 TTATCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCAGTCAAAGTCTTC 6104 Query 138601 ACAAAAATCTGCATGGCT 138618 ||||||||||||||| || Sbjct 6103 ACAAAAATCTGCATGCCT 6086 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||| || || || |||| | Sbjct 5827 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCA 5768 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | || || |||||||| || ||||| || ||||| ||| || || | Sbjct 5767 AAGATCAAGCGTTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACG 5708 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||||||||| | || | || || || |||||||| || Sbjct 5707 TTGTCAATGGTGTCGGAAGACTCCACCTCAAGAGTGATAGTCTTGCCGGTCAGAGTCTTG 5648 Query 138601 ACAAAAATCTGCATGGCT 138618 || || ||||||||| || Sbjct 5647 ACGAAGATCTGCATGCCT 5630 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || ||||| || ||||| || | Sbjct 5599 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCCAGCTGTTTGCCAGCG 5540 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| || || ||||| || || || ||| || ||| | Sbjct 5539 AAGATGAGACGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGGATCTTAGCTTTGACG 5480 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||||||||||| || | || || || |||| || || Sbjct 5479 TTGTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTTC 5420 Query 138601 ACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 5419 ACAAAAATCTGCAT 5406 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGA 138479 |||||||| || |||||||||||| | || | || | ||||| || || || |||| Sbjct 6055 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCTGCCA-TCCTCCAGCTGCTTGCCGGC 5997 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA 138539 | |||| | ||| || ||||||||||| || || || ||||| ||| || || | Sbjct 5996 AAAGATCAAACGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC 5937 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | |||||||| ||||| ||||| | || | || || || |||||||| || Sbjct 5936 GTTGTCAATGGTGTCGGAAGACTCTACCTCAAGAGTGATGGTCTTGCCGGTCAGAGTCTT 5877 Query 138600 TACAAAAATCTGCATGGCT 138618 || || ||||||||| || Sbjct 5876 CACGAAGATCTGCATGCCT 5858 >seq4197 Length=262831 Score = 102 bits (112), Expect = 8e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| || || || ||||| || || || || | Sbjct 76332 GACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCG 76273 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| |||||||||||||| || || ||||| || ||||| ||| || || | | Sbjct 76272 AAGATGAGACGCTGTTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTAGCCTTCACA 76213 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||| | ||||| ||||| | || | || || |||||||| || || Sbjct 76212 TTG-TCGATCGTGTCCGAGGACTCGACCTCAAGTGTGATGGTCTTGCCAGTCAGGGTCTT 76154 Query 138600 TACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 76153 GACAAAAATCTGCAT 76139 Score = 100 bits (110), Expect = 3e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| || ||||||||||| || || || ||||| || ||||| || | Sbjct 76106 TTGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCAAGCTGTTTGCCTG 76047 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| |||||||| |||||||| || ||||| || ||||| ||| || || | Sbjct 76046 CAAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTAGCCTTGA 75987 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | || | |||||| | ||||| ||||| | || | || || ||||||| || | Sbjct 75986 CGTTGTCAATGGTGTCCGAGGACTCAACCTCCAGGGTGATGGTCTTGCCAGTCAAGGTCT 75927 Query 138599 TTACAAAAATCTGCATGGCT 138618 | || || ||||||||| || Sbjct 75926 TCACGAAGATCTGCATGCCT 75907 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || ||||| || || || || | | Sbjct 76560 GACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCA 76501 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| |||||||| |||||||| || || || || ||||| ||| || || | | Sbjct 76500 AAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACA 76441 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||| | ||||| ||||| | || | || || || |||||||| || Sbjct 76440 TTG-TCAATTGTGTCTGATGACTCAACCTCAAGGGTGATGGTCTTGCCGGTCAGAGTCTT 76382 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 76381 GACAAAGATCTGCAT 76367 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| || || || ||||| || || || || | Sbjct 75876 GACTCCTTCTGGATGTTGTAGTCGGCCAGTGTGCGGCCATCCTCAAGCTGCTTGCCAGCG 75817 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| || || || || || ||||| ||| || || | Sbjct 75816 AAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACG 75757 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||| ||||||| || | || || || || || || || Sbjct 75756 TTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGTGTCTTC 75697 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 75696 ACAAAGATCTGCAT 75683 >seq4294 Length=230714 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| |||| || | ||| | || | | | |||||||| || |||||||||||| Sbjct 45207 GCCGCCGCGCAGGCGGAGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGC 45148 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || || || || || |||| |||| |||||||| |||||||| || Sbjct 45147 GAGCGTGCGTCCATCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGG 45088 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | | || | |||||| | |||||||| Sbjct 45087 AATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCAC 45028 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | ||| | || || || ||||| || || || || |||||||| Sbjct 45027 CTCCAGCGTGATGGTCTTCCCTGTCAGGGTCTTCACGAAGATCTGCAT 44980 >seq3577 Length=483236 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||||| || || |||| Sbjct 183918 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCG 183859 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || || || || ||||| ||| || || | Sbjct 183858 AAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 183799 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||||||||| | ||| | || || || ||||| || || Sbjct 183798 TTGTCGATGGTGTCTGAGGACTCCACCTCCAACGTGATGGTCTTGCCCGTCAGGGTCTTC 183739 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 183738 ACGAAGATCTGCAT 183725 >seq891 Length=1582050 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||||| || || |||| Sbjct 1149500 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCG 1149559 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || || || || ||||| ||| || || | Sbjct 1149560 AAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 1149619 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||||||||| | ||| | || || || ||||| || || Sbjct 1149620 TTGTCGATGGTGTCAGAGGACTCCACCTCCAACGTGATGGTCTTGCCCGTCAGGGTCTTC 1149679 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 1149680 ACGAAGATCTGCAT 1149693 >seq2778 Length=1391004 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || ||||||||||||||| | ||||| ||||| || || || |||| | Sbjct 173807 GACTCTTTCTGAATGTTGTAGTCGGCAAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCA 173866 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538 |||| || ||||| ||||| || || |||||||| ||||| ||| | || | || Sbjct 173867 AAGATCAGGCGCTGCTGGTCTGGGGGGATACCTTCCTTGTC-CTGAATCTTGGCCTTCAC 173925 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | |||||||| ||| ||||| | | | || || || || ||||| | Sbjct 173926 ATTG-TCGATGGTGTCGGAGCTCTCAACCTCCAGAATAATGGTCTTGCCTGTGAGAGTCT 173984 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 173985 TGACAAAGATCTGCAT 174000 Score = 84.2 bits (92), Expect = 2e-11 Identities = 116/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 ||||| ||||| || || | | |||| |||||||| ||||| ||||| || || || ||| Sbjct 175125 TCCTCAAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTG 175184 Query 138520 TCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578 || ||| ||| || | ||||| | | ||| || | ||||||||||||| || | Sbjct 175185 TCCTGGATCTTTGCCTTGACATTGT-CAATGGTATCAGAAGACTCCACCTCGAGGGTGAT 175243 Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 || || ||||||| || || || || || |||||| || Sbjct 175244 AGTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCATGCCT 175283 >seq2624 Length=565299 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||| || || || || ||||| || || || || | | Sbjct 25572 GACTCCTTCTGAATGTTGTAATCAGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCA 25631 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||||||||| ||||| || ||||| ||| || || | Sbjct 25632 AAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTAGCCTTCACG 25691 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | || || ||||| | ||| | || || || |||| || || Sbjct 25692 TTGTCGATCGTGTCTGAGGATTCGACCTCAAGCGTAATTGTCTTGCCGGTCAAGGTCTTG 25751 Query 138601 ACAAAAATCTGCATGGCT 138618 ||||| ||||||||| || Sbjct 25752 ACAAAGATCTGCATGCCT 25769 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || || ||||| | || || || | Sbjct 25800 GACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCCTCCAACTGCTTGCCAGCG 25859 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| |||||||| ||||||||||| ||||| || ||||| ||| || || | | Sbjct 25860 AAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTAGCCTTCACA 25919 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||| | ||||| ||||| | ||| | || || ||||||| || || Sbjct 25920 TTG-TCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCAGTCAAGGTCTT 25978 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 25979 GACGAAGATCTGCAT 25993 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| || |||||||||||| || || || ||||| || || || || | Sbjct 25114 TTGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCAG 25173 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | | || |||||||| |||||||| || || || || ||||| ||| || || | Sbjct 25174 CAAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCA 25233 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | || | ||||| | ||||| ||||| | || | || || ||||||| || | Sbjct 25234 CGTTGTCAATCGTGTCAGATGACTCGACCTCAAGAGTGATGGTCTTGCCAGTCAATGTCT 25293 Query 138599 TTACAAAAATCTGCAT 138614 | || || |||||||| Sbjct 25294 TGACGAAGATCTGCAT 25309 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || || |||||| || || || || | Sbjct 25344 GACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCG 25403 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || |||||||| |||||||| || || || || ||||| ||| || || | | Sbjct 25404 AAAATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACA 25463 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||| | ||||| ||||| | || | || || || ||||| || || Sbjct 25464 TTG-TCGATCGTGTCTGAGGACTCAACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTT 25522 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 25523 GACAAAGATCTGCAT 25537 >seq192 Length=981986 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||| |||||| | || || ||||| || || || |||| Sbjct 848990 GACTCCTTCTGGATGTTATAGTCGGCGAGCGTTCGTCCATCCTCCAGCTGCTTGCCGGCG 848931 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| |||||||| || || || || ||||| ||| || || | Sbjct 848930 AAGATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 848871 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||||||||| | ||| | || || || ||||| || || Sbjct 848870 TTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTC 848811 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 848810 ACGAAGATCTGCAT 848797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496234348767840