Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zizania_20latifolia_20[genbank_20GCA_5F000418225.1_202013-07-09] 4,522 sequences; 603,989,347 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2624 125 5e-24 seq2778 116 2e-21 seq4197 113 3e-20 seq192 107 1e-18 seq4493 105 4e-18 seq1848 98.7 6e-16 seq891 98.7 6e-16 seq3577 95.1 8e-15 seq4294 93.3 3e-14 >seq2624 Length=565299 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| || | ||| | || | ||| | ||| || ||||| ||||| ||||||| Sbjct 25995 CCTCCTCTGAGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCC 26054 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| |||||||| || || ||||| || || || ||||||||| | || Sbjct 26055 AGGGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAAATCAGACGCTGCTGGTCTGGGGGA 26114 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| |||||| | || | || || |||||| Sbjct 26115 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCCGAGGACTCAACC 26174 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| ||| ||||| || || ||||| |||||||||||||||||||| Sbjct 26175 TCGAGGGTGATGGTCTTGCCGGTGAGTGTCTTCACAAAGATCTGCAT 26221 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || ||||| | ||||| |||| ||| | ||| || ||||| ||||| ||||| | Sbjct 25311 CCACCCCTGAGCCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 25370 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || | || || ||||| || || || || || || || |||||||| | || Sbjct 25371 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGGGGG 25430 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| || || | |||| || || |||||| Sbjct 25431 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCTGAGGACTCAACC 25490 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | ||| ||||| || || || || ||||| ||||||||||||||| Sbjct 25491 TCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACAAAGATCTGCATA 25538 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || |||| |||||||| || || ||||| Sbjct 25119 TCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAA 25178 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| || ||| Sbjct 25179 ATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTG 25238 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| ||| | ||| || || | || ||||| || || || | ||||| || Sbjct 25239 TCAATCGTGTCAGATGACTCGACCTCAAGAGTGATGGTCTTGCCAGTCAATGTCTTGACG 25298 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 25299 AAGATCTGCATA 25310 >seq2778 Length=1391004 Score = 116 bits (128), Expect = 2e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 |||| ||||| | | || || | ||||| ||| || ||||| ||||| ||||| | Sbjct 174228 TTCCACCCCTGAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 174287 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 |||| | | |||| |||||||| ||||| ||||| || || || ||||||||| | | Sbjct 174288 CAAGGGTCCTGCCATCCTCCAGCTGCTTTCCAGCAAAGATGAGGCGCTGCTGGTCTGGGG 174347 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | ||||||||||| |||||| || ||| | |||| || | ||||| Sbjct 174348 GAATGCCCTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCAATCGTGTCTGATGACTCAA 174407 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | || ||||| || || ||||||||||| || ||||||||||| Sbjct 174408 CCTCAAGTGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 174456 Score = 113 bits (124), Expect = 3e-20 Identities = 144/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||||||||| ||||| | |||| | || |||| |||||||| || |||||||| Sbjct 173810 TCTTTCTGAATGTTGTAGTCGGCAAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAG 173869 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||||||| | || | || |||||||| |||||| || || || Sbjct 173870 ATCAGGCGCTGCTGGTCTGGGGGGATACCTTCCTTGTCCTGAATCTTGGCCTTCAC--AT 173927 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || | |||||| || | | ||||| || || ||||||||||| Sbjct 173928 --TGTCGATGGTGTCGGAGCTCTCAACCTCCAGAATAATGGTCTTGCCTGTGAGAGTCTT 173985 Query 34967 CACAAAGATCTGCATA 34982 ||||||||||||||| Sbjct 173986 GACAAAGATCTGCATA 174001 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | ||| | || || ||||| || || || || Sbjct 175317 TCCTTCTGGATGTTGTAGTCAGCAAGTGTGCGTCCGTCTTCAAGCTGCTTGCCAGCGAAG 175376 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | ||||||||||| ||||| |||||| Sbjct 175377 ATGAGACGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 175436 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || |||||| |||| ||||||||| || || ||||| ||||||||| Sbjct 175437 TCAATGGTATCCGAGGACTCAACCTCGAGGGTTATGGTCTTGCCAGTGAGGGTCTTCACA 175496 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 175497 AAGATCTGCAT 175507 Score = 98.7 bits (108), Expect = 6e-16 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | |||| | | |||| || ||||| || || || || Sbjct 174038 TCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCTAGCTGCTTGCCAGCGAAG 174097 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||||||| | || | ||||||||||| |||||| || || || Sbjct 174098 ATGAGACGCTGCTGGTCTAGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCAC--AT 174155 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| ||| | |||||| || | ||| || ||||| || ||||||||||| Sbjct 174156 --TGTCGATGGTGTCAGAGCTCTCAACCTCCAGGGTAATAGTTTTGCCAGTGAGAGTCTT 174213 Query 34967 CACAAAGATCTGCAT 34981 ||||| |||||||| Sbjct 174214 GACAAAAATCTGCAT 174228 >seq4197 Length=262831 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||| | ||| | || | ||| | ||| || ||||| ||||| ||||| | Sbjct 75909 CCTCCCCTGAGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 75850 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| || ||||| || || || || || || || ||||||||| | || Sbjct 75849 AGTGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGA 75790 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| |||||| | || | || || |||||| Sbjct 75789 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACC 75730 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| ||| ||||| || || ||||| |||||||||||||||||||| Sbjct 75729 TCGAGGGTGATGGTCTTGCCGGTGAGTGTCTTCACAAAGATCTGCAT 75683 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || ||||| | ||| | ||||| ||||| ||| || ||||| ||||| ||||| | | Sbjct 76593 CCACCCCTGAGCCTGAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 76534 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| || ||||| || || ||||| || || || |||||||| | || Sbjct 76533 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 76474 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| || || | || | || | |||||| Sbjct 76473 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATTGTGTCTGATGACTCAACC 76414 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | ||| ||||| || || || |||||||| ||||||||||||||| Sbjct 76413 TCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCATA 76366 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||| | ||| | || | ||| | || || ||||| ||||| ||||| | Sbjct 76137 CCTCCCCTGAGCCTGAGGACAAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCC 76078 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| || |||||||| || ||||| || || || |||||||| | || Sbjct 76077 AGGGTGCGGCCATCCTCAAGCTGTTTGCCTGCAAAGATGAGACGCTGCTGGTCCGGGGGG 76018 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| |||||| | || | || || |||||| Sbjct 76017 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACC 75958 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | ||| ||||| || || || | |||||||| ||||||||||| Sbjct 75957 TCCAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 75911 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| || || || |||| |||| | || |||| || Sbjct 76803 ACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCCGCAAGGGTGCGGCCATCCTCA 76744 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || || |||||||| | || | ||||||||||| Sbjct 76743 AGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGG 76684 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | || | ||| | |||||| || | ||| || ||||| Sbjct 76683 ATCTTGGCCTTCACGTTGTCAATTGTGTCAGACGACTCAACCTCCAGGGTGATTGTTTTG 76624 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || | |||||||||||||||||||| Sbjct 76623 CCGGTCAAGGTCTTCACAAAGATCTGCAT 76595 >seq192 Length=981986 Score = 107 bits (118), Expect = 1e-18 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||||||||| | || ||||| |||| |||||||| || ||||| || Sbjct 848987 TCCTTCTGGATGTTATAGTCGGCGAGCGTTCGTCCATCCTCCAGCTGCTTGCCGGCGAAG 848928 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||||| || ||| Sbjct 848927 ATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTG 848868 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || || | || ||||| || ||||| || |||||||| Sbjct 848867 TCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACG 848808 Query 34971 AAGATCTGCATATTCGTAGACT 34992 ||||||||||| || | || || Sbjct 848807 AAGATCTGCATCTTGGCAGCCT 848786 >seq4493 Length=164055 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | |||| | || |||| |||||||| || |||||||| Sbjct 95938 TCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 95879 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| |||||| Sbjct 95878 ATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTG 95819 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | ||| || |||| ||| || || || || || |||||||| || Sbjct 95818 TCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTCAGAGTCTTGACG 95759 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 95758 AAGATCTGCAT 95748 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | | |||| |||||||| || |||||||| Sbjct 96166 TCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTGCCATCCTCCAGCTGCTTGCCGGCAAAG 96107 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| ||||| Sbjct 96106 ATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTG 96047 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| || ||| || || | ||| || || || || || | ||||||||| Sbjct 96046 TCAATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCAGTCAATGTCTTCACA 95987 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 95986 AAGATCTGCAT 95976 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||| | | | || | ||||| ||| || ||||| ||||| ||||| | | Sbjct 95746 CCTCCCCTGAGACGGAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 95687 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | | | || |||||||| || || ||||| || || || ||||| ||| | || Sbjct 95686 AGGGTCCTGCCGTCCTCCAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGATCTGGGGGA 95627 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| |||||| | || | ||| || ||| || Sbjct 95626 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGAGGACTCCACC 95567 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | ||| || || || || || | ||||||||||| |||||||| Sbjct 95566 TCAAGGGTGATAGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 95520 >seq1848 Length=11040 Score = 98.7 bits (108), Expect = 6e-16 Identities = 151/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| ||| ||| ||||| ||||| ||||| | ||| | || |||| ||| Sbjct 6298 ACCAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCCTCC 6239 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || || |||||||| | || | ||||||||||| Sbjct 6238 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 6179 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||||| || ||||||| || | ||| || || | ||| || || Sbjct 6178 ATCTTGGCCTTGAC--AT--TATCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGT 6123 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || | |||||||||||| |||||||| Sbjct 6122 CTTGCCAGTCAAAGTCTTCACAAAAATCTGCAT 6090 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || |||| ||||||||||| || || || Sbjct 5596 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCCAGCTGTTTGCCAGCGAAG 5537 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | |||||||| || ||||| ||||||| Sbjct 5536 ATGAGACGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGGATCTTAGCTTTGACGTTG 5477 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| || ||| || |||| ||| || || || || || | ||||||||| Sbjct 5476 TCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTTCACA 5417 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 5416 AAAATCTGCAT 5406 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | | |||| |||||||| || |||||||| Sbjct 6052 TCCTTCTGGATGTTGTAGTCGGCGAGGGTCCTGCCATCCTCCAGCTGCTTGCCGGCAAAG 5993 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | ||||||||||| | || | ||||||||||| ||||| |||||| Sbjct 5992 ATCAAACGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 5933 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || || | || ||||| || || || ||||||||||| Sbjct 5932 TCAATGGTGTCGGAAGACTCTACCTCAAGAGTGATGGTCTTGCCGGTCAGAGTCTTCACG 5873 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 5872 AAGATCTGCAT 5862 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || |||||||| || |||||||| Sbjct 5824 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAG 5765 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | ||||||||||| | || | ||||||||||| ||||| |||||| Sbjct 5764 ATCAAGCGTTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 5705 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || || | || || || || || || |||||||| || Sbjct 5704 TCAATGGTGTCGGAAGACTCCACCTCAAGAGTGATAGTCTTGCCGGTCAGAGTCTTGACG 5645 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 5644 AAGATCTGCAT 5634 >seq891 Length=1582050 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||| ||||| | ||| | || |||| || Sbjct 1149485 ACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCG 1149544 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || || |||||||| |||| | ||||||||||| Sbjct 1149545 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGG 1149604 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | || | ||| || ||| || || | || ||||| || Sbjct 1149605 ATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGGACTCCACCTCCAACGTGATGGTCTTG 1149664 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||||| || |||||||| ||||||||||| || Sbjct 1149665 CCCGTCAGGGTCTTCACGAAGATCTGCATCTT 1149696 >seq3577 Length=483236 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||| ||||| | ||| | || |||| || Sbjct 183933 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCG 183874 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || || |||||||| |||| | ||||||||||| Sbjct 183873 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGG 183814 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | || | || || ||| || || | || ||||| || Sbjct 183813 ATCTTGGCCTTCACGTTGTCGATGGTGTCTGAGGACTCCACCTCCAACGTGATGGTCTTG 183754 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||||| || |||||||| ||||||||||| || Sbjct 183753 CCCGTCAGGGTCTTCACGAAGATCTGCATCTT 183722 >seq4294 Length=230714 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | || | ||| |||| |||||||| || ||||| || Sbjct 45170 TCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGTCCATCTTCCAGCTGCTTGCCGGCGAAG 45111 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||||| || ||| Sbjct 45110 ATGAGACGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTG 45051 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || || | || ||||| || || || || |||||||| Sbjct 45050 TCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCTGTCAGGGTCTTCACG 44991 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 44990 AAGATCTGCAT 44980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324615708833616