Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zizania_20latifolia_20[genbank_20GCA_5F000418225.1_202013-07-09]
4,522 sequences; 603,989,347 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq603 224 2e-52
seq4 221 2e-51
seq3959 197 2e-44
seq1503 197 2e-44
seq4479 183 5e-40
seq3989 179 6e-39
seq1270 174 2e-37
seq3937 163 4e-34
seq1869 159 5e-33
seq4466 150 3e-30
seq1012 91.5 2e-12
seq4294 89.7 8e-12
seq156 89.7 8e-12
seq324 87.8 3e-11
seq1392 86.0 1e-10
>seq603
Length=994148
Score = 224 bits (248), Expect = 2e-52
Identities = 246/324 (76%), Gaps = 6/324 (2%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| |||||||| ||| | |||||| ||| |||||| ||||||||||| ||||||
Sbjct 841796 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGGCCACGCTTC 841855
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|||||||| |||||||| ||||| |||||||||||||||||||||||| ||| |||
Sbjct 841856 TTGAGCCAGAAGATGGCGCAGAAGGATCCCGAGAAAAAGATGCCCTCGACGCAGGCGAAG 841915
Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520
|||| || |||||||| ||| | || || | || |||||| ||| |||||
Sbjct 841916 GCGACTAGGCGCTCGGC-GAAGCGCTCA---CCGC--CGTCGATCCAGCGCATGGCCCAG 841969
Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580
|| ||||| | ||| | ||| || ||||| |||||||| || ||| |||||||||||
Sbjct 841970 TCGGCCTTGCGGCGCACGGCGGGAACGGTGTCTATGGCGCGGAAAAGGCGGTCCTTCTCG 842029
Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640
|| ||| || ||| || |||| || |||||||| |||| || |||||||| |||
Sbjct 842030 ACGTCGTCGCGGATGTACGTCTCGAGCAGCAGCGAGTACATCTCCGAATGGATGTTCTCG 842089
Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664
|||||||||||||| || || |||
Sbjct 842090 ATGGCGATCTGGAAACCGTAGAAG 842113
Score = 194 bits (214), Expect = 3e-43
Identities = 235/314 (75%), Gaps = 12/314 (4%)
Strand=Plus/Plus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
|| ||||| |||||| |||||| || ||||||||||||| || ||||| | |||||||
Sbjct 841490 TAGTCGCCGACGCGCTTCTCGAAGAAATTGGTCTTGCCCTGCAGGGAGATGAGCTCCATC 841549
Query 793968 CACGGGAACGGGTTGGC--CGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGC 794025
|| ||| ||||||| ||| ||| ||||| ||| ||||||| | || ||||
Sbjct 841550 CAGTCGAAGGGGTTGGTGACGTT--GTACATCTTCTTGCAGCCGAGCGCCATTAGGAGGC 841607
Query 794026 GGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCA 794085
|||| |||||||| || |||||||||| ||||||| || |||||||||||| |||||| |
Sbjct 841608 GGTCAGCGACGAACTCGATGTACTGGCTCATGAGGTCGCCGTTCATGCCGACGAGCGCGA 841667
Query 794086 CGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCC 794145
|||| || | |||| ||| || | ||||||| |||||||| ||| || ||| |||
Sbjct 841668 CGGGGAGAGCGTCGCAGACGAAGTTCCTCTCGATGTCGACGGCTTCGGCGACGAT-TGCA 841726
Query 794146 TGGGCACGTCGGACGACG----GCTTGTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAG 794201
|| ||| ||| | || ||||| || ||| | |||||| |||||||| |||
Sbjct 841727 CGG--ACG-CGGGCCTCGTCAAGCTTGCCGCGGAGGAGGTCGTAGAGGAGGCAGGCGAAG 841783
Query 794202 TCGCAATGCAGACC 794215
||||| ||||| ||
Sbjct 841784 TCGCAGTGCAGGCC 841797
Score = 123 bits (136), Expect = 4e-22
Identities = 167/232 (72%), Gaps = 3/232 (1%)
Strand=Plus/Plus
Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209
||||||| || || || || |||||| | || |||||||| |||||| ||
Sbjct 842120 GCCTCGGCGACCTGCACGTCGGACATGAACCTCGACGCGAGGTTCTCGAGCACGATACCA 842179
Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269
|| ||||||||| |||||||| ||||| || || || ||||||||| | |||
Sbjct 842180 TCAGAGGCGGCGAAGAAGGCGAGCACGTGGGAGACGAAATGGCGCTCGTCGGGGGACAGC 842239
Query 796270 GAGA---CCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326
| | |||||||| || ||||| | |||||| |||||||| | ||||| || ||
Sbjct 842240 GTGGTGTCCCAGTGGCGCGCGTCGGAGGAGAGGTCCACCTCCTCCGTCGTCCAGAACGAC 842299
Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378
||| | ||||| ||||| | |||||| ||| | |||| |||||||||||||
Sbjct 842300 GCCACCGCCTTCTTGTAGAACTCCCAGATCTGAGGGTACCGGATGGGGAACA 842351
>seq4
Length=1057841
Score = 221 bits (244), Expect = 2e-51
Identities = 243/324 (75%), Gaps = 6/324 (2%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| |||||||| ||| | |||||| ||| || || ||||||||||||||||||
Sbjct 125394 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTAAGACCCGGCATGAGGCCGCGCTTC 125453
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|| |||||||||||||| ||||| ||||||||| ||||||||||||||| ||| ||
Sbjct 125454 TTAAGCCAAAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATGCCCTCGACGCAGGCGAAA 125513
Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520
| ||||| |||||||| || || ||| || |||||| ||| ||||||
Sbjct 125514 GCAACGAGGCGCTCGGCGAAGCGCTCGCCGCCGTC------GATCCAGCGCATGGCCCAC 125567
Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580
|| ||||| | ||| | || || |||||||||||||| ||||| |||||||||||
Sbjct 125568 TCGGCCTTGCGGCGCACAGCAGGGACGGTGTCGATGGCGCGGAAGAGACGGTCCTTCTCG 125627
Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640
|| ||| || ||| || |||| || |||||||| |||| |||||||| || |||
Sbjct 125628 ACGTCGTCGCGGATGTACGTCTCGAGCAGCAGCGAGTACATCTCCGAGTGGATATTCTCG 125687
Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664
|||||||||||||| || || |||
Sbjct 125688 ATGGCGATCTGGAACCCGTAGAAG 125711
Score = 192 bits (212), Expect = 9e-43
Identities = 233/312 (75%), Gaps = 8/312 (3%)
Strand=Plus/Plus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
|| ||||| |||||| |||||| ||||||||||| |||| || ||||| | |||||||
Sbjct 125088 TAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTTCCCTGCAGGGAGATGAGCTCCATC 125147
Query 793968 CACGGGAACGGGTTGGC--CGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGC 794025
|| ||| || ||||| ||| ||| ||||| ||| ||||||| | |||||||
Sbjct 125148 CAGTCGAAGGGATTGGCGACGT--TGTACATCTTCTTGCAGCCGAGCGCCATGAGCAGGC 125205
Query 794026 GGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCA 794085
||||||||||||| || || ||||||| ||| ||| | |||||||||||| ||| || |
Sbjct 125206 GGTCGGCGACGAACTCGATATACTGGCTCATCAGGACTCCGTTCATGCCGACGAGAGCGA 125265
Query 794086 CGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCT-GC 794144
|||| |||| |||| ||| ||||| | ||||| |||||||| || | || ||||| ||
Sbjct 125266 CGGGGAGCGCGTCGCAGACGAACTCCCTTTCGATGTCGACGGCGTCAACGACGATCTCGC 125325
Query 794145 CTGGGCACGTCGGA-CGACGGCTTGTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTC 794203
|| ||| | ||| ||||| || ||| | |||||| ||||| || |||||
Sbjct 125326 GGACGCGGGTCTCATCGA--GCTTGCCGCGGAGGAGGTCGTAGAGGAGGCATGCGAAGTC 125383
Query 794204 GCAATGCAGACC 794215
||| ||||| ||
Sbjct 125384 GCAGTGCAGGCC 125395
Score = 141 bits (156), Expect = 1e-27
Identities = 171/232 (74%), Gaps = 3/232 (1%)
Strand=Plus/Plus
Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209
||||||| || || || || |||||| | | || |||||||| |||||||||
Sbjct 125718 GCCTCGGCGACCTGCACGTCGGACATGAACCTGGACGCGAGGTTCTCGAGCACGATGCCA 125777
Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269
|| ||||||||| |||||||| ||||| ||| ||||| ||||||||| | |||
Sbjct 125778 TCAGAGGCGGCGAAGAAGGCGAGCACGTGGGAGATGAAGTGCCGCTCGTCGGGGGACAGC 125837
Query 796270 ---GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326
| | |||||||| || ||||| | |||||| |||||||| || ||||| || ||
Sbjct 125838 ACGGTGTCCCAGTGGCGCGCGTCGGAGGAGAGGTCCACCTCCTCCGCCGTCCAGAACGAC 125897
Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378
||| | | ||| ||||| | |||||| ||| | |||| |||||||||||||
Sbjct 125898 GCCACCGACTTCTTGTAGAACTCCCAGATCTGCGGGTACCGGATGGGGAACA 125949
>seq3959
Length=418290
Score = 197 bits (218), Expect = 2e-44
Identities = 187/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| |||||||||||||||||| |||| || |||||| | |
Sbjct 331310 TGAACTTGGTGACGGCCTTGGTGCCCTCTGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 331251
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| || ||||| | ||||||||||||||||| | ||| ||| |||||| ||
Sbjct 331250 GGACGAGCCGCACCGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 331191
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || |||||| ||||||| | ||| |||| |||||||||| || |||||||
Sbjct 331190 GGGCGAGGCGGGCGGCCTCCTGGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 331131
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| |||||| || | |||||| |||||||||||||||||||||
Sbjct 331130 TGATGGACATGGCCTTGGAGGAGATCCCGATGTCGGGATGCACCTGCTTGAGCACCTTG 331072
>seq1503
Length=704043
Score = 197 bits (218), Expect = 2e-44
Identities = 187/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 519036 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 519095
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| |||||||| | |||||||||||||||| | ||| ||| |||||| ||
Sbjct 519096 GGACGAGGCGCACCGATGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 519155
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || |||||| ||||||| | ||| |||| |||||||||| || |||||||
Sbjct 519156 GAGCGAGGCGGGCGGCCTCCTGGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 519215
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| |||||| || | ||||||||||||||||||||||||||||
Sbjct 519216 TGATGGACATGGCCTTGGAGGAGATCCCGATGTCGGGGTGCACCTGCTTGAGCACCTTG 519274
>seq4479
Length=1077677
Score = 183 bits (202), Expect = 5e-40
Identities = 184/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || || || | |
Sbjct 120702 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCTCCCGGGA 120643
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| ||||||||||||||||| | ||| ||| |||||| ||
Sbjct 120642 GGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 120583
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | ||| |||| || ||| |||| |||||||||| || |||||||
Sbjct 120582 GGGCGAGCTTGGCGGACTCGCTGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 120523
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | |||||||||||||||||| |||||||||
Sbjct 120522 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGCACCTGCTTTAGCACCTTG 120464
Score = 174 bits (192), Expect = 2e-37
Identities = 182/239 (76%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || || || | |
Sbjct 98261 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCTCCCGGGA 98202
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| ||||||||||||||||| | || ||| |||||| ||
Sbjct 98201 GGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTAATGGTGGGCTTCTTGTTGTAGC 98142
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | ||||||| | ||| |||| |||||||||| || |||||||
Sbjct 98141 GGGCGAGCTTGGCGGCCTCCCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 98082
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | |||||||||||||||||| |||||||||
Sbjct 98081 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGCACCTGCTTCAGCACCTTG 98023
Score = 174 bits (192), Expect = 2e-37
Identities = 182/239 (76%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| || || ||||| |||||| |||| || || || | |
Sbjct 110348 TGAACTTGGTGACGGCCTTGGTGCCTTCGGAGACAGCGTGCTTGGCGAGCTCTCCCGGGA 110289
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| ||||||||||||||||| | ||| ||| |||||| ||
Sbjct 110288 GGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 110229
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | |||||||| | ||| |||| |||||||||| || |||||||
Sbjct 110228 GGGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 110169
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | |||||||||||||||||| |||||||||
Sbjct 110168 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGCACCTGCTTCAGCACCTTG 110110
>seq3989
Length=396954
Score = 179 bits (198), Expect = 6e-39
Identities = 183/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 251833 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 251892
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| |||||||| | |||||||||||| |||| | ||| ||| |||||| |
Sbjct 251893 GGACGAGGCGCACCGAGGTCTGGATCTCCCGGGAGGTGATGGTGGGCTTCTTGTTGTACC 251952
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|| || | |||||||| | ||| |||| |||||||||| || |||||||
Sbjct 251953 TGGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 252012
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
| || ||||| | ||| ||||||||| | ||||||||||||||||||||||||||||
Sbjct 252013 TAATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGCACCTGCTTGAGCACCTTG 252071
>seq1270
Length=719947
Score = 174 bits (192), Expect = 2e-37
Identities = 182/239 (76%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| | || || || || | |
Sbjct 429448 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTAGCGAGCTCTCCCGGGA 429507
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| ||||||||||||||||| | ||| ||| |||||| ||
Sbjct 429508 GGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 429567
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | |||||||| | ||| |||| |||||||||| || |||||||
Sbjct 429568 GGGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 429627
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | ||| |||||||||||||| |||||||||
Sbjct 429628 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCAGGGTGCACCTGCTTCAGCACCTTG 429686
Score = 170 bits (188), Expect = 3e-36
Identities = 181/239 (76%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || || || | |
Sbjct 446262 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCTCCCGGGA 446203
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| ||||||||||||||||| | || ||| |||||| ||
Sbjct 446202 GGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTTATGGTGGGCTTCTTGTTGTAGC 446143
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | ||||||| | ||| |||| |||||||||| || |||||||
Sbjct 446142 GGGCGAGCTTGGCGGCCTCACCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 446083
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | ||| |||||||||||||| |||||||||
Sbjct 446082 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCACCTGCTTCAGCACCTTG 446024
>seq3937
Length=426735
Score = 163 bits (180), Expect = 4e-34
Identities = 185/242 (76%), Gaps = 6/242 (2%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| || ||||||||| |||| || |||||| | |
Sbjct 81715 TGAACTTGGTGACGGCCTTGGTGCCCTCGGATACGGCGTGCTTGGCGAGCTCGCCGGGGA 81656
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| ||||||||||||||| | | ||| ||| |||||| || |
Sbjct 81655 GGACGAGGCGGACGGAGGTCTGGATCTCGCGAGAGGTGATGGTGGGCTTCTTGTT-GTAC 81597
Query 1485590 GCGCCAGGC--GGCCGGCCTCGGTGC-CGATGCGGTCGATCATGTCGTTGACAAACGAGT 1485646
| | || |||| ||||| ||| ||| |||| |||||||||| || ||||
Sbjct 81596 CTGGCGAGCTTGGCC-GCCTC-CTGCGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGT 81539
Query 1485647 TCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCT 1485706
||||||| ||||| | ||| |||||| || | ||| ||||||||||||||||||||||
Sbjct 81538 TCATGATGGACATGGCCTTGGAGGAGATCCCGATGTCCGGGTGCACCTGCTTGAGCACCT 81479
Query 1485707 TG 1485708
||
Sbjct 81478 TG 81477
>seq1869
Length=654272
Score = 159 bits (176), Expect = 5e-33
Identities = 181/240 (75%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || ||||| | |
Sbjct 401984 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCAGGTA 402043
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||| |||| ||||||||||||||||| ||| || ||||||| |
Sbjct 402044 GTACGAGGCGAACGGAGGTCTGGATCTCGCGGGACGTGATGGTAGGCTTCTTGTTATACC 402103
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGC-CGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648
|| || | | | ||||| ||| ||| |||| |||||||||| || ||||||
Sbjct 402104 TGGCGAGCCTGGCCGCCTC-CTGCGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTC 402162
Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||| ||||||| ||| |||||| || | ||| ||||||||||| ||||||||||||
Sbjct 402163 ATGATGGACATCGCCTTGGAGGAGATCCCAATGTCCGGGTGCACCTGTTTGAGCACCTTG 402222
>seq4466
Length=171965
Score = 150 bits (166), Expect = 3e-30
Identities = 181/242 (75%), Gaps = 8/242 (3%)
Strand=Plus/Minus
Query 1485474 CTTGGTGACGGCCTTGGTACCCTCTGAGACGGC----GTGCC--TGGCCAGTTCGCCGCG 1485527
|| || |||||||||||| |||| |||||||| ||||| |||| || |||||| |
Sbjct 152675 CTCGGAGACGGCCTTGGTGCCCTTGGAGACGGCCTTGGTGCCCTTGGCGAGCTCGCCGGG 152616
Query 1485528 CATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGT 1485587
| || ||||| |||| ||||||||||| |||| | ||| ||| ||||||
Sbjct 152615 GAGGACGAGGCGGACGGAGGTCTGGATCTTACGGGAGGTGATGGTGGGCTTCTTGTTGTA 152556
Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGC-CGATGCGGTCGATCATGTCGTTGACAAACGAGT 1485646
|||||| |||||| ||||||| ||| ||| |||| ||||||| || || ||||
Sbjct 152555 GCGCGCGAGGCGGGCGGCCTCC-TGCGCGAGCTTCTCGAAGATGTCGTAGATGAAGGAGT 152497
Query 1485647 TCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCT 1485706
||||||| ||||| | ||| ||||||||| | ||| |||| ||||||||||||||| |
Sbjct 152496 TCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTACACCTGCTTGAGCACAT 152437
Query 1485707 TG 1485708
||
Sbjct 152436 TG 152435
>seq1012
Length=23041
Score = 91.5 bits (100), Expect = 2e-12
Identities = 89/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||||||||||| ||| |||||||| || || ||| | ||| |||| || || ||
Sbjct 2173 GCCGCCAACTATCTCAACATCAAGGGACTGCTGGATCTTACATGCCAGACTGTTGCTGAC 2114
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| |||||||| ||| | ||||| || |||||||||||||| ||||||||| |||
Sbjct 2113 ATGATCAAGGGGAAGACTCCCGAAGAGATCCGCAAGACCTTCAACATCAAGAACG 2059
>seq4294
Length=230714
Score = 89.7 bits (98), Expect = 8e-12
Identities = 98/129 (76%), Gaps = 1/129 (1%)
Strand=Plus/Plus
Query 1433482 AGGGC-TTCCGCCCGACCAGCAGCGTCTCCTTTATGCGGGCCAGCAGATGGAAGACGGTC 1433540
||||| ||||||| ||||||||||||||| | | || ||| ||||| ||||||| || |
Sbjct 45080 AGGGCATTCCGCCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAAGATGGAC 45139
Query 1433541 GCCGGCTGGCCGACTATGCCATCCGCGCCGAGGCGTCAATGCATCTGGTGCTCAGGCTAC 1433600
|| ||| |||||||| ||||| ||| || | |||| ||||| ||| | || |
Sbjct 45140 GCACGCTCGCCGACTACAACATCCAGAAGGAGTCGACCCTGCACCTGGTTCTCCGCCTGC 45199
Query 1433601 GCGGCGGCG 1433609
|||||||||
Sbjct 45200 GCGGCGGCG 45208
>seq156
Length=104215
Score = 89.7 bits (98), Expect = 8e-12
Identities = 166/237 (70%), Gaps = 9/237 (4%)
Strand=Plus/Plus
Query 1249568 ACGGGCGTCGCCTATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAGAGC 1249627
|||||| ||||||| ||||| | | ||| || ||| || ||||||| || |||||| ||
Sbjct 24859 ACGGGC-TCGCCTACCTGCATGGCCACGAGCCACCCATCATCCACCGGGACCTCAAGTGC 24917
Query 1249628 AGCAACCTGCTGGTCGACG---ACGAGTACAATGTCAAGGTGGCCGACTTTGGTCTCGCG 1249684
|||| | | ||| ||| || || | |||||| | | |||| | || |||||
Sbjct 24918 GACAACATCTTCGTCAACGGCAACCAGGGGGAGGTCAAGATCGGCGACCTCGGCCTCGCC 24977
Query 1249685 CGCATCCGC-GAGGACAATGCCACCATGACGCGGTGCGGCACGCCGGCGTGGACGGCGCC 1249743
| ||||| | || | ||||| | | || || |||||| | || | ||||||
Sbjct 24978 TCCTTCCGCTGCGGCCGCCGCCACTCTCCCTGCGT-CGACACGCCAGAGTTCATGGCGCC 25036
Query 1249744 CGAGGTCATCCGCGGCGAGCGCTACGACGAGCGCGCCGACGTCTACTCGATCGGCAT 1249800
|||||| | || || || ||||||||||| ||| ||||||||||| |||||||
Sbjct 25037 GGAGGTC-TACGAGG--AGTCCTACGACGAGCTCGCTGACGTCTACTCCTTCGGCAT 25090
>seq324
Length=67548
Score = 87.8 bits (96), Expect = 3e-11
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 1249578 CCTATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAGAGCAGCAACCTGC 1249637
|||| || ||||| |||| || ||| |||| |||||||| |||||| || |||| | |
Sbjct 67384 CCTACCTTCACGCCATCGAGCCCCCCATCGTGCACCGCGACGTCAAGACCACCAACATCC 67325
Query 1249638 TGGTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGGTCTCGCGCGCATC 1249690
| |||||| ||| | | | |||||||| ||||||||||| ||| | ||| ||
Sbjct 67324 TCCTCGACGCCGATTTCCACGTCAAGGTCGCCGACTTTGGCCTCTCCCGCCTC 67272
>seq1392
Length=713455
Score = 86.0 bits (94), Expect = 1e-10
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|| || |||| |||| ||||| || || || ||| || ||| |||||||||| ||
Sbjct 637885 GCTGCGAACTTCCTCCACATCGAGGGACTGCTGGATCTGACCTGCCAGACCGTGGCTGAC 637826
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| |||||||| ||| | || ||||| |||||||||||||| |||||| || |||
Sbjct 637825 ATGATCAAGGGGAAGACACCTGAGGAGATCCGCAAGACCTTGAACATCGAGAACG 637771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915765374235158
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |