Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zizania_20latifolia_20[genbank_20GCA_5F000418225.1_202013-07-09]
4,522 sequences; 603,989,347 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq2624 140 3e-28
seq1848 140 3e-28
seq4493 134 1e-26
seq2778 123 3e-23
seq4197 122 9e-23
seq891 120 3e-22
seq3577 114 1e-20
seq4294 102 8e-17
seq4281 96.9 4e-15
seq2570 91.5 1e-13
seq1042 84.2 2e-11
seq359 82.4 8e-11
>seq2624
Length=565299
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||||||||| | | ||| ||||| || ||||| ||||| || ||||||||||| |
Sbjct 25995 CCTCCTCTGAGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCC 26054
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| |||||||||||||||| ||||||||| || || ||
Sbjct 26055 AGGGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAAATCAGACGCTGCTGGTCTGGGGGA 26114
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| ||| | ||||| || || || ||
Sbjct 26115 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCCGAGGACTCAACC 26174
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || ||||| | || || || || || |||||
Sbjct 26175 TCGAGGGTGATGGTCTTGCCGGTGAGTGTCTTCACAAAGATCTGCAT 26221
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| ||||| || || || ||||| || |||||||||||| |
Sbjct 25083 CCACCACGGAGGCGGAGCACCAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCC 25142
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| |||||||||| ||||||||| || || ||
Sbjct 25143 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCCGGGGGA 25202
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || || || ||| | ||||| || || || ||
Sbjct 25203 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCAATCGTGTCAGATGACTCGACC 25262
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| ||||| || || || || || || ||||| || |||||
Sbjct 25263 TCAAGAGTGATGGTCTTGCCAGTCAATGTCTTGACGAAGATCTGCAT 25309
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || ||||| | || ||| ||||| || ||||| ||||| || ||||||||||| |
Sbjct 25311 CCACCCCTGAGCCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 25370
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| || ||||| ||||| || ||||| | ||||||||| || || ||
Sbjct 25371 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGGGGG 25430
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || || || ||| | ||||| || || || ||
Sbjct 25431 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCTGAGGACTCAACC 25490
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || ||||| | || || || || || |||||
Sbjct 25491 TCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACAAAGATCTGCAT 25537
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| ||||| | | ||| || || || || || ||||| ||||||||||| || |
Sbjct 25539 CCTCCCCTGAGCCTGAGCACAAGATGGAGTGTAGACTCCTTCTGAATGTTGTAATCAGCC 25598
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| ||||| || | ||||||||| || || ||
Sbjct 25599 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGG 25658
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || || || ||| | ||||| || ||||| ||
Sbjct 25659 ATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCGATCGTGTCTGAGGATTCGACC 25718
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || ||||| || || ||||| || || || || || || |||||
Sbjct 25719 TCAAGCGTAATTGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 25765
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| ||||| | | ||||||||| || ||||| ||||| || ||||||||||| |
Sbjct 25767 CCTCCCCTGAGCCTGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCC 25826
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || | ||| ||||| || || || | ||||||||| || || ||
Sbjct 25827 AGGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 25886
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || || || ||| | ||||| || || || ||
Sbjct 25887 ATACCCTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCCGAGGACTCGACC 25946
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || || || || ||||| || |||||
Sbjct 25947 TCAAGCGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 25993
>seq1848
Length=11040
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| ||||| || | |||||||| || ||||| ||||| || |||||||||||| |
Sbjct 5632 CCTCCCCTGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 5573
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||||||||| || || || | ||||||||| || || ||
Sbjct 5572 AGGGTGCGGCCATCCTCCAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGA 5513
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || |||||| ||| | ||||| || || |||||
Sbjct 5512 ATACCCTCCTTATCCTGGATCTTAGCTTTGACGTTGTCGATGGTGTCAGAGGACTCCACC 5453
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || || ||||| || || || || ||||| |||||
Sbjct 5452 TCGAGGGTGATAGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 5406
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| ||||| || | || ||||| || || || ||||| || |||||||||||| |
Sbjct 5860 CCTCCCCTGAGGCGGAGGACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCG 5801
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| || ||||| ||||| ||||| ||||| || ||||| || || ||
Sbjct 5800 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAGCGTTGCTGGTCCGGGGGA 5741
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || ||||| ||| | |||||||| || |||||
Sbjct 5740 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 5681
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| || || || ||||| | ||| || ||||| || |||||
Sbjct 5680 TCAAGAGTGATAGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 5634
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| || || || | || ||||| | || || ||||| || |||||||||||| |
Sbjct 6088 CCTCCCCTAAGACGGAGGACAAGGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 6029
Query 134547 ACGGT-GTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| ||| || | || || ||||| ||||| ||||| |||||||| ||||| || || ||
Sbjct 6028 AGGGTCCTGCCA-TCCTCCAGCTGCTTGCCGGCAAAGATCAAACGTTGCTGGTCCGGAGG 5970
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
||||| || || || || || || ||||| ||| | |||||||| || || ||
Sbjct 5969 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCTAC 5910
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| ||||| || ||||| | ||| || ||||| || |||||
Sbjct 5909 CTCAAGAGTGATGGTCTTGCCGGTCAGAGTCTTCACGAAGATCTGCAT 5862
Score = 122 bits (134), Expect = 9e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| ||||| || ||||||||||| || ||||||||||| |
Sbjct 6316 CCACCACGGAGGCGGAGCACCAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCTGCC 6257
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| || || || | ||||||||| || || ||
Sbjct 6256 AGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGA 6197
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| || | |||||||| || |||||
Sbjct 6196 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCGATGGTGTCGGAAGACTCCACC 6137
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || || || || ||||| || || ||||| |||||
Sbjct 6136 TCAAGGGTGATAGTCTTGCCAGTCAAAGTCTTCACAAAAATCTGCAT 6090
>seq4493
Length=164055
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| ||||| || | ||| ||||| || ||||| ||||| || ||||||||||| ||
Sbjct 95746 CCTCCCCTGAGACGGAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 95687
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| ||| || ||||| ||||| ||||| || | |||||||||||| || ||
Sbjct 95686 AGGGTCCTGCCGTCCTCCAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGATCTGGGGGA 95627
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| ||| | ||||| || || |||||
Sbjct 95626 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGAGGACTCCACC 95567
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || || ||||| || || || || ||||| |||||
Sbjct 95566 TCAAGGGTGATAGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 95520
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| ||||| || | || || || || || || ||||| || ||||||||||| ||
Sbjct 95974 CCTCCCCTGAGGCGGAGGACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCA 95915
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| ||||| || | ||||||||| || || ||
Sbjct 95914 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGA 95855
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || ||||| ||| | ||||| || || |||||
Sbjct 95854 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCAGAAGACTCCACC 95795
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || || || || | ||| || ||||| || |||||
Sbjct 95794 TCGAGGGTGATAGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 95748
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || ||||| || | || ||||| || || || ||||| || ||||||||||| ||
Sbjct 96202 CCACCCCTGAGGCGGAGGACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCA 96143
Query 134547 ACGGT-GTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| || || | || || ||||| ||||| ||||| || | ||||||||| || || ||
Sbjct 96142 AGAGTCCTGCCA-TCCTCCAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGGGG 96084
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
||||| || || ||||| || || ||||| ||| | ||||| || || |||||
Sbjct 96083 GATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGGACTCCAC 96024
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || || || || || || || || || || |||||
Sbjct 96023 CTCAAGGGTGATAGTCTTGCCAGTCAATGTCTTCACAAAGATCTGCAT 95976
>seq2778
Length=1391004
Score = 123 bits (136), Expect = 3e-23
Identities = 167/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
|||| || ||||| |||| || ||||| || ||||| ||||| || ||||||||||||
Sbjct 174228 TTCCACCCCTGAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 174287
Query 134545 CAACGGT-GTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603
||| ||| || | || || ||||| || || ||||| || | |||||||| || ||
Sbjct 174288 CAAGGGTCCTGCCA-TCCTCCAGCTGCTTTCCAGCAAAGATGAGGCGCTGCTGGTCTGGG 174346
Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663
|| ||||| || || || ||||| || || || ||| | ||||| || || ||
Sbjct 174347 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCAATCGTGTCTGATGACTCA 174406
Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || ||||| || || || | ||| |||||||| || |||||
Sbjct 174407 ACCTCAAGTGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 174456
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || ||||| || | ||| ||||| || || || || || ||||||||||||||| ||
Sbjct 173774 CCACCCCTGAGGCGGAGCACCAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGCA 173833
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| ||||| ||||| |||| |||||||| || || ||
Sbjct 173834 AGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCTGGGGGG 173893
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || || ||||| || || || ||| | |||||||| || ||
Sbjct 173894 ATACCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAGCTCTCAACC 173953
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||| ||||||| || || || | ||| || || || || |||||
Sbjct 173954 TCCAGAATAATGGTCTTGCCTGTGAGAGTCTTGACAAAGATCTGCAT 174000
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| ||||| || | |||||||| || ||||| ||||| || ||||||||||| ||
Sbjct 175281 CCTCCCCTGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 175340
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || ||||| ||||| || || || | |||||||||||| || ||
Sbjct 175341 AGTGTGCGTCCGTCTTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGGGGG 175400
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || ||||| ||| | || || || || || ||
Sbjct 175401 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTATCCGAGGACTCAACC 175460
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || || || | || || || || || |||||
Sbjct 175461 TCGAGGGTTATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 175507
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || ||||| || | ||| ||||| || || || ||||| || ||||||||||| ||
Sbjct 174002 CCACCCCTGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCA 174061
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| ||||| || || || | ||||||||| || | ||
Sbjct 174062 AGGGTCCTACCATCCTCTAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTAGGGGA 174121
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || || || ||| | ||||| || || ||
Sbjct 174122 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCAGAGCTCTCAACC 174181
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| || ||||| ||||| || || | ||| || || ||||| ||||||
Sbjct 174182 TCCAGGGTAATAGTTTTGCCAGTGAGAGTCTTGACAAAAATCTGCATT 174229
Score = 100 bits (110), Expect = 3e-16
Identities = 110/144 (76%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| ||||| || | |||||||| || |||||||||||||| || |||||||| ||
Sbjct 174458 CCTCCCCTGAGGCGGAGGACGAGGTGAAGGGTGGATTCCTTTTGGATATTGTAGTCAGCA 174517
Query 134547 ACGGT-GTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| ||| || | || || || || ||||| ||||| || | ||||||||| ||||| ||
Sbjct 174518 AGGGTCCTGCCA-TCCTCAAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGAGG 174576
Query 134606 TATGCCTTCTTTTTCTTGAATTTT 134629
||||| || || || || || ||
Sbjct 174577 AATGCCCTCCTTGTCCTGGATCTT 174600
>seq4197
Length=262831
Score = 122 bits (134), Expect = 9e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || ||||| | | || ||||| || ||||| ||||| || ||||||||||| ||
Sbjct 76593 CCACCCCTGAGCCTGAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 76534
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| ||||| |||| ||||||||| || || ||
Sbjct 76533 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 76474
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || || || ||| | |||||| || || || ||
Sbjct 76473 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATTGTGTCTGATGACTCAACC 76414
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || ||||| | ||| || || || || |||||
Sbjct 76413 TCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 76367
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| ||||| | | ||| ||||| || ||||| ||||| || |||||||||||| |
Sbjct 75909 CCTCCCCTGAGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 75850
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| ||||| || || || | ||||||||| || || ||
Sbjct 75849 AGTGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGA 75790
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| ||| | ||||| || || || ||
Sbjct 75789 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACC 75730
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || ||||| | || || || || || |||||
Sbjct 75729 TCGAGGGTGATGGTCTTGCCGGTGAGTGTCTTCACAAAGATCTGCAT 75683
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| ||||| | | || ||||| || || || ||||| || ||||||||||| |
Sbjct 76137 CCTCCCCTGAGCCTGAGGACAAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCC 76078
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||||||||||||||| || | ||||||||| || || ||
Sbjct 76077 AGGGTGCGGCCATCCTCAAGCTGTTTGCCTGCAAAGATGAGACGCTGCTGGTCCGGGGGG 76018
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || ||||| ||| | ||||| || || || ||
Sbjct 76017 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACC 75958
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || || || || ||||| || |||||
Sbjct 75957 TCCAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 75911
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| ||||| | | || ||||| || ||||| ||||| || |||||||||||| |
Sbjct 76365 CCTCCCCTGAGCCTAAGTACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 76306
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| || || || | |||||| || || || ||
Sbjct 76305 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGGTCTGGGGGG 76246
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || || || ||| | ||||| || || || ||
Sbjct 76245 ATACCCTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCCGAGGACTCGACC 76186
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || | || || || ||||| |||||
Sbjct 76185 TCAAGTGTGATGGTCTTGCCAGTCAGGGTCTTGACAAAAATCTGCAT 76139
>seq891
Length=1582050
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| ||||| |||||||| ||||| || |||||||||||| |
Sbjct 1149467 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCG 1149526
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || |||||||| ||||| || || || | |||||||| || |||||
Sbjct 1149527 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 1149586
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || || || ||| | ||||| || || |||||
Sbjct 1149587 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGGACTCCACC 1149646
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| | || ||||| || || || | || || ||||| || ||||| |||
Sbjct 1149647 TCCAACGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 1149697
>seq3577
Length=483236
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| ||||| || ||||| ||||| || |||||||||||| |
Sbjct 183951 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 183892
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || |||||||| ||||| || || || | |||||||| || |||||
Sbjct 183891 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 183832
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || || || ||| | ||||| || || |||||
Sbjct 183831 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCTGAGGACTCCACC 183772
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| | || ||||| || || || | || || ||||| || ||||| |||
Sbjct 183771 TCCAACGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 183721
>seq4294
Length=230714
Score = 102 bits (112), Expect = 8e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| || || || ||||| || |||||||||||| | | ||| | || ||
Sbjct 45188 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGTCCATCTTCC 45129
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| || || || | ||||||||| || ||||| ||||| || || || ||
Sbjct 45128 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGG 45069
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || || || ||| | ||||| || || ||||| || || || ||||| ||
Sbjct 45068 ATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTC 45009
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | || || ||||| || |||||
Sbjct 45008 CCTGTCAGGGTCTTCACGAAGATCTGCAT 44980
>seq4281
Length=255066
Score = 96.9 bits (106), Expect = 4e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| |||||||||||||||||||| ||||||| ||||||| |
Sbjct 1802 CCGCCGCGGAGGCGGAGCACCAGGTGTAGCGTGGATTCCTTCTGAATGTCGTAGTCGGCC 1743
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| || ||||| || || || || || | |||||||| ||||||||
Sbjct 1742 AAGGTGCGGCCGTCCTCCAGCTGCTTCCCCGCGAAGATGAGCCGCTGCTGGTCGGGCGGA 1683
Query 134607 ATGCCT 134612
|| |||
Sbjct 1682 ATTCCT 1677
>seq2570
Length=608568
Score = 91.5 bits (100), Expect = 1e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|||||||| |||||||| ||||| || ||||||||||| | | |||| | ||| ||
Sbjct 261045 ACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGCCCGTCCTCC 260986
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCT 134612
||||| ||||| || || |||| ||||||||||| ||||| || |||
Sbjct 260985 AGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGATCCGGCGGGATTCCT 260938
>seq1042
Length=22717
Score = 84.2 bits (92), Expect = 2e-11
Identities = 103/138 (75%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| || ||||| | | || | ||| || || || ||||| |||||||||||||| |||
Sbjct 10599 CCACCCCTGAGCCTGAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGCC 10540
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | || | || || | ||||||||| ||||| ||||||||||| ||||| || ||
Sbjct 10539 AATG-TGCGTCCATCCTCCAACTGTTTGCCAGCAAATATCAAACGCTGTTGATCTGGAGG 10481
Query 134606 TATGCCTTCTTTTTCTTG 134623
|| ||||| || || ||
Sbjct 10480 AATCCCTTCCTTGTCCTG 10463
>seq359
Length=971778
Score = 82.4 bits (90), Expect = 8e-11
Identities = 104/140 (74%), Gaps = 6/140 (4%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| || ||||| | | || | ||| || || |||||||| |||||||||||||| |||
Sbjct 509648 CCACCCCTGAGCCTGAGGACCAAGTGAAGAGTTGATTCCTTCTGAATGTTGTAGTCAGCC 509589
Query 134546 AACGGTGTGAGAG--TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603
| ||||| | || || | ||| ||||| ||||| ||||||||||| ||||| ||
Sbjct 509588 A---GTGTGCGTCCATCCTCCAACTGCTTGCCAGCAAATATCAAACGCTGTTGATCCGGA 509532
Query 134604 GGTATGCCTTCTTTTTCTTG 134623
|| || ||||| || || ||
Sbjct 509531 GGAATCCCTTCCTTGTCCTG 509512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505369832355440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |