Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zizania_20latifolia_20[genbank_20GCA_5F000418225.1_202013-07-09] 4,522 sequences; 603,989,347 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq4282 82.4 6e-11 >seq4282 Length=242231 Score = 82.4 bits (90), Expect = 6e-11 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 ||||||||||||||||||| | | || || | || || |||||||| || ||| Sbjct 169671 TGAGCAATCATGTATGTCAGAAGAGAATATGATGCAATGTTGAATGGAACACCAAGTCCC 169730 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACT 118663 || ||||| || | || |||| ||||| || ||||||||||| |||||||||||| Sbjct 169731 ATATCTGCAGAGCGTTGATACATCTGGCATGATAGCTCCCCGTTCTCAACATAAAACT 169788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414453957406408