Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zizania_20latifolia_20[genbank_20GCA_5F000418225.1_202013-07-09] 4,522 sequences; 603,989,347 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq3577 167 6e-36 seq4197 159 8e-34 seq891 158 3e-33 seq2624 154 4e-32 seq1848 152 1e-31 seq4493 149 1e-30 seq4294 149 1e-30 seq192 145 2e-29 seq2778 141 2e-28 seq2770 107 5e-18 seq1114 96.9 8e-15 seq4281 93.3 1e-13 seq348 91.5 4e-13 seq581 84.2 5e-11 >seq3577 Length=483236 Score = 167 bits (184), Expect = 6e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| ||||| || || |||| ||||| ||||| | || | ||||| Sbjct 183936 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCC 183877 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || ||||| ||||| || || |||||||| Sbjct 183876 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 183817 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| |||||||||||||||| ||||| || |||||||| ||| Sbjct 183816 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCTGAGGACTCCACCTCCAACGTGATGGTC 183757 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 |||||||||| || || | ||| | ||||| || Sbjct 183756 TTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 183722 >seq4197 Length=262831 Score = 159 bits (176), Expect = 8e-34 Identities = 153/196 (78%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || || || ||||||||||| ||||| || || |||| ||||| ||||||| || | Sbjct 76356 AGCCTAAGTACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGG 76297 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || |||||||| ||||||||||| || || |||||||| || || ||||| ||| Sbjct 76296 CCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGGTCTGGGGGGATACCCTCC 76237 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| ||||||| ||||| ||||| |||| || || || | ||| Sbjct 76236 TTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGTGTG 76177 Query 225676 ATCGTCTTGCCCGTCA 225691 || |||||||| |||| Sbjct 76176 ATGGTCTTGCCAGTCA 76161 Score = 143 bits (158), Expect = 6e-29 Identities = 148/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || || || ||||||||||| ||||| || || |||| ||||| ||||||| || | Sbjct 75900 AGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGTGTGCGG 75841 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || |||||||| ||||||||||| || || || ||||| || ||||| || ||| Sbjct 75840 CCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCC 75781 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| ||| || || |||||||| |||| || || || | ||| Sbjct 75780 TTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTG 75721 Query 225676 ATCGTCTTGCCCGT 225689 || |||||||| || Sbjct 75720 ATGGTCTTGCCGGT 75707 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || || |||||||||||||| || || || || |||| ||||| || |||| || | Sbjct 76128 AGCCTGAGGACAAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGG 76069 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || ||||| || || || ||||| || || || ||||| || || ||||| ||| Sbjct 76068 CCATCCTCAAGCTGTTTGCCTGCAAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCC 76009 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| ||| || || |||||||| |||| || || || | ||| Sbjct 76008 TTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCCAGGGTG 75949 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||| ||||| || || | ||| | ||||| Sbjct 75948 ATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 75911 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| ||||| || || |||| ||||||||| || | || | ||||| Sbjct 76806 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCCGCAAGGGTGCGGCCATCC 76747 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| || || || ||||| || || || || ||||||||| Sbjct 76746 TCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCT 76687 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| || || ||||| || | || || || | ||||| || Sbjct 76686 TGGATCTTGGCCTTCACGTTGTCAATTGTGTCAGACGACTCAACCTCCAGGGTGATTGTT 76627 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| ||||| || || Sbjct 76626 TTGCCGGTCAAGGTCTT 76610 >seq891 Length=1582050 Score = 158 bits (174), Expect = 3e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || ||||| || || |||| ||||| ||||| | || | ||||| Sbjct 1149482 AGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCC 1149541 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || ||||| ||||| || || |||||||| Sbjct 1149542 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 1149601 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| |||| ||||| || |||||||| ||| Sbjct 1149602 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGGACTCCACCTCCAACGTGATGGTC 1149661 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 |||||||||| || || | ||| | ||||| || Sbjct 1149662 TTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 1149696 >seq2624 Length=565299 Score = 154 bits (170), Expect = 4e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || || || || |||||||| ||||| || || |||| ||||| || |||| || | Sbjct 25776 AGCCTGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGG 25835 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || | |||||| ||||||||||| || || || ||||| || || ||||| ||| Sbjct 25836 CCATCCTCCAACTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCC 25895 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| ||||||| ||||| ||||| |||| || || || | |||| Sbjct 25896 TTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTG 25955 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||| ||||| || || | ||| | ||||| Sbjct 25956 ATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 25993 Score = 129 bits (142), Expect = 1e-24 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || || || ||||||||||| ||||| || || |||| ||||| || |||| || | Sbjct 26004 AGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGG 26063 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || |||||||| || || || || || || || ||||| || ||||| || ||| Sbjct 26064 CCATCCTCCAGCTGCTTGCCTGCAAAAATCAGACGCTGCTGGTCTGGGGGAATGCCCTCC 26123 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| ||| || ||||||||||| |||| || || || | ||| Sbjct 26124 TTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTG 26183 Query 225676 ATCGTCTTGCCCGT 225689 || |||||||| || Sbjct 26184 ATGGTCTTGCCGGT 26197 >seq1848 Length=11040 Score = 152 bits (168), Expect = 1e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| ||||||||||| || |||| ||||| || |||| || | ||||| Sbjct 6301 AGCACCAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCC 6242 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || ||||| || ||||| || |||||||| Sbjct 6241 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 6182 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| || | ||||| || | ||||| ||| Sbjct 6181 TGGATCTTGGCCTTGACATTATCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTC 6122 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| |||||||| || Sbjct 6121 TTGCCAGTCAAAGTCTT 6105 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| ||||| || || |||| ||||| ||||| | || | ||||| Sbjct 5617 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCC 5558 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || ||||||||||| || || || ||||| || |||||||| ||||| || Sbjct 5557 TCCAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGAATACCCTCCTTATCC 5498 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| || || ||||||||||| |||| ||||| || | ||||| ||| Sbjct 5497 TGGATCTTAGCTTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTC 5438 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| ||||| || || Sbjct 5437 TTGCCGGTCAATGTCTT 5421 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| || || || || |||| ||||| ||||| | || | || || Sbjct 5845 AGGACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCC 5786 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| | ||||| ||||| || |||||||| |||||||| Sbjct 5785 TCCAGCTGCTTGCCGGCAAAGATCAAGCGTTGCTGGTCCGGGGGAATACCCTCCTTGTCC 5726 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || |||||||| || | ||||| || | ||||| ||| Sbjct 5725 TGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGAGTGATAGTC 5666 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| ||| || | ||| | ||||| Sbjct 5665 TTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 5634 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| | || || || || |||| ||||| ||||| | || || ||||| Sbjct 6073 AGGACAAGGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCTGCCATCC 6014 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| | ||||| ||||| || || || || |||||||| Sbjct 6013 TCCAGCTGCTTGCCGGCAAAGATCAAACGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 5954 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || |||||||| || | || || || | ||||| ||| Sbjct 5953 TGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCTACCTCAAGAGTGATGGTC 5894 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| ||| || | ||| | ||||| Sbjct 5893 TTGCCGGTCAGAGTCTTCACGAAGATCTGCAT 5862 >seq4493 Length=164055 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || || || || || |||| ||||| || || | ||| || ||||| Sbjct 96187 AGGACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTGCCATCC 96128 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || |||||||| || || ||||| || || || || ||||||||| Sbjct 96127 TCCAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 96068 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| || |||||||| |||| ||||| || | ||||| ||| Sbjct 96067 TGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTC 96008 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| ||||| || || Sbjct 96007 TTGCCAGTCAATGTCTT 95991 Score = 140 bits (154), Expect = 8e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| || ||||| || || |||| ||||| || || | || || || || Sbjct 95731 AGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCC 95672 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| |||||||| || || || || || ||||| || |||||||| Sbjct 95671 TCCAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 95612 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| |||| ||||| || | ||||| ||| Sbjct 95611 TGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTC 95552 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| ||||| || || Sbjct 95551 TTGCCGGTCAATGTCTT 95535 >seq4294 Length=230714 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || || || || |||| ||||| ||||| | || | |||||| Sbjct 45191 AGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGTCCATCT 45132 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || ||||| |||||||| || |||||||| Sbjct 45131 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCC 45072 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| |||| ||||| || | |||||| ||| Sbjct 45071 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTC 45012 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||| || || | ||| | ||||| Sbjct 45011 TTCCCTGTCAGGGTCTTCACGAAGATCTGCAT 44980 >seq192 Length=981986 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || || || || |||| || || ||||| | |||| ||||| Sbjct 849008 AGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGCGAGCGTTCGTCCATCC 848949 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || ||||| ||||| || || |||||||| Sbjct 848948 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 848889 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| |||| ||||| || | |||||| ||| Sbjct 848888 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTC 848829 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || ||||||| || || | ||| | ||||| || Sbjct 848828 TTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 848794 >seq2778 Length=1391004 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||||||||| || ||||| || || |||| ||||| ||||| | || || ||||| Sbjct 174244 CAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATC 174303 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 || |||||||| ||||| ||||| || || || ||||| || ||||| || |||||||| Sbjct 174304 CTCCAGCTGCTTTCCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 174363 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 || ||||| |||||| || || |||||||| | || || || | ||||| || Sbjct 174364 CTGAATCTTGGCCTTCACGTTGTCAATCGTGTCTGATGACTCAACCTCAAGTGTGATGGT 174423 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| || | ||| || | ||| | ||||| Sbjct 174424 CTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 174456 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| || || || || |||| ||||| || || | || || ||||| Sbjct 174017 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCC 174076 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 ||||||||||| ||||||||||| || || || ||||| | ||||| || |||||||| Sbjct 174077 TCTAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTAGGGGAATGCCCTCCTTGTCC 174136 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||||||||| ||| | || || || | || || || Sbjct 174137 TGGATCTTCGCCTTCACATTGTCGATGGTGTCAGAGCTCTCAACCTCCAGGGTAATAGTT 174196 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || | ||| || | || | |||||| Sbjct 174197 TTGCCAGTGAGAGTCTTGACAAAAATCTGCATT 174229 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| || || ||||| || | ||||| ||||| | || | ||||| Sbjct 173789 AGCACCAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGCAAGGGTACGGCCATCC 173848 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || || || ||||| || || |||||||||||||| Sbjct 173849 TCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCTGGGGGGATACCTTCCTTGTCC 173908 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||||||| ||||||||||| ||| | || || || | | || ||| Sbjct 173909 TGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAGCTCTCAACCTCCAGAATAATGGTC 173968 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| || | ||| || Sbjct 173969 TTGCCTGTGAGAGTCTT 173985 Score = 114 bits (126), Expect = 3e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| ||||| || || |||| ||||| || || | || | || ||| Sbjct 175296 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGTGTGCGTCCGTCT 175355 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || || || || || || || |||||||| Sbjct 175356 TCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGGGGGATTCCCTCCTTGTCC 175415 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || ||||| || |||| || || || | || || ||| Sbjct 175416 TGGATCTTGGCCTTGACGTTGTCAATGGTATCCGAGGACTCAACCTCGAGGGTTATGGTC 175475 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 175476 TTGCCAGT 175483 >seq2770 Length=3071 Score = 107 bits (118), Expect = 5e-18 Identities = 108/139 (78%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 7724 TATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGC 7783 ||| || |||| ||||||| || | ||||| |||| ||||||||||||| ||||||||| Sbjct 1397 TATGTCAAGGGCTGGTAAGGTTTTGCGCGTTGTATCGAATTAAACCACATGCTCCACCGC 1456 Query 7784 TTATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG 7843 || | || | |||||| || |||||||||| |||||| |||| | | |||| || Sbjct 1457 TTGTGCAGGCCCCCGTCAATTCCTTTGAGTTTCGGTCTTGCGACCGTACTCCCCAGGCGG 1516 Query 7844 AATATTT-ACGCGTTAGCT 7861 | | ||| ||||||||||| Sbjct 1517 AGTGTTTCACGCGTTAGCT 1535 Score = 86.0 bits (94), Expect = 1e-11 Identities = 89/113 (79%), Gaps = 3/113 (3%) Strand=Plus/Minus Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825 |||||| ||||||||||||| ||||||||| | |||||||| | || ||| | ||||| Sbjct 2071 TGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAG 2013 Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATGTTACGTGA 6878 |||||| |||| || ||||||||| |||| ||||| || ||| ||||| Sbjct 2012 CAGTGGGGAATTTTCCGCAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGA 1960 >seq1114 Length=1590138 Score = 96.9 bits (106), Expect = 8e-15 Identities = 64/71 (90%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696 || |||||||||||||||| |||||||||||||||| ||||||| |||| |||||||||| Sbjct 1023617 AGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATA 1023558 Query 372697 GGGTCTGACAC 372707 | |||||||| Sbjct 1023557 GACTCTGACAC 1023547 >seq4281 Length=255066 Score = 93.3 bits (102), Expect = 1e-13 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || |||||||| || || | | ||| |||||||| || | || || Sbjct 1787 AGCACCAGGTGTAGCGTGGATTCCTTCTGAATGTCGTAGTCGGCCAAGGTGCGGCCGTCC 1728 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || ||||||||||| |||||||| || || || |||||||||||||| ||| Sbjct 1727 TCCAGCTGCTTCCCCGCGAAGATGAGCCGCTGCTGGTCGGGCGGAATTCCT 1677 >seq348 Length=941607 Score = 91.5 bits (100), Expect = 4e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || |||||||| | ||||||||||| ||||| || | |||||||| || || || | Sbjct 470063 AGCCTCAGGACCAAATGGAGAGTGGACTCTTTCTGAATGTTGTAATCAGCTAATGTGTGC 470004 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| | |||||||| || || || || | ||| || || || |||||||| || Sbjct 470003 CCATCTTCCAATTGCTTCCCTGCAAAAATCAGCCTTTGCTGATCTGGGGGAATACCCTCT 469944 Query 225616 TTGTCTTG 225623 ||||| || Sbjct 469943 TTGTCCTG 469936 >seq581 Length=926953 Score = 84.2 bits (92), Expect = 5e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| ||||| || || |||| ||||| || |||| || | || || Sbjct 35830 AGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTCC 35889 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || ||||||||||| |||||||| || || || ||||| || || || ||| Sbjct 35890 TCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCT 35940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192462106978268