Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zizania_20latifolia_20[genbank_20GCA_5F000418225.1_202013-07-09]
4,522 sequences; 603,989,347 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq3577 167 6e-36
seq4197 159 8e-34
seq891 158 3e-33
seq2624 154 4e-32
seq1848 152 1e-31
seq4493 149 1e-30
seq4294 149 1e-30
seq192 145 2e-29
seq2778 141 2e-28
seq2770 107 5e-18
seq1114 96.9 8e-15
seq4281 93.3 1e-13
seq348 91.5 4e-13
seq581 84.2 5e-11
>seq3577
Length=483236
Score = 167 bits (184), Expect = 6e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || |||||||| ||||| || || |||| ||||| ||||| | || | |||||
Sbjct 183936 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCC 183877
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || || ||||| ||||| || || ||||||||
Sbjct 183876 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 183817
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| |||||| |||||||||||||||| ||||| || |||||||| |||
Sbjct 183816 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCTGAGGACTCCACCTCCAACGTGATGGTC 183757
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|||||||||| || || | ||| | ||||| ||
Sbjct 183756 TTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 183722
>seq4197
Length=262831
Score = 159 bits (176), Expect = 8e-34
Identities = 153/196 (78%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| || || ||||||||||| ||||| || || |||| ||||| ||||||| || |
Sbjct 76356 AGCCTAAGTACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGG 76297
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
||||| || |||||||| ||||||||||| || || |||||||| || || ||||| |||
Sbjct 76296 CCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGGTCTGGGGGGATACCCTCC 76237
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||||||| ||||| ||||| |||| || || || | |||
Sbjct 76236 TTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGTGTG 76177
Query 225676 ATCGTCTTGCCCGTCA 225691
|| |||||||| ||||
Sbjct 76176 ATGGTCTTGCCAGTCA 76161
Score = 143 bits (158), Expect = 6e-29
Identities = 148/194 (76%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| || || ||||||||||| ||||| || || |||| ||||| ||||||| || |
Sbjct 75900 AGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGTGTGCGG 75841
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
||||| || |||||||| ||||||||||| || || || ||||| || ||||| || |||
Sbjct 75840 CCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCC 75781
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||| || || |||||||| |||| || || || | |||
Sbjct 75780 TTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTG 75721
Query 225676 ATCGTCTTGCCCGT 225689
|| |||||||| ||
Sbjct 75720 ATGGTCTTGCCGGT 75707
Score = 136 bits (150), Expect = 9e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| || |||||||||||||| || || || || |||| ||||| || |||| || |
Sbjct 76128 AGCCTGAGGACAAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGG 76069
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
||||| || ||||| || || || ||||| || || || ||||| || || ||||| |||
Sbjct 76068 CCATCCTCAAGCTGTTTGCCTGCAAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCC 76009
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||| || || |||||||| |||| || || || | |||
Sbjct 76008 TTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCCAGGGTG 75949
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| |||||||| ||||| || || | ||| | |||||
Sbjct 75948 ATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 75911
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || |||||||| ||||| || || |||| ||||||||| || | || | |||||
Sbjct 76806 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCCGCAAGGGTGCGGCCATCC 76747
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||| ||||| || || || ||||| || || || || |||||||||
Sbjct 76746 TCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCT 76687
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| |||||| || || ||||| || | || || || | ||||| ||
Sbjct 76686 TGGATCTTGGCCTTCACGTTGTCAATTGTGTCAGACGACTCAACCTCCAGGGTGATTGTT 76627
Query 225682 TTGCCCGTCAAAGTTTT 225698
||||| ||||| || ||
Sbjct 76626 TTGCCGGTCAAGGTCTT 76610
>seq891
Length=1582050
Score = 158 bits (174), Expect = 3e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| || ||||| || || |||| ||||| ||||| | || | |||||
Sbjct 1149482 AGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCC 1149541
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || || ||||| ||||| || || ||||||||
Sbjct 1149542 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 1149601
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| |||||| ||||||||||| |||| ||||| || |||||||| |||
Sbjct 1149602 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGGACTCCACCTCCAACGTGATGGTC 1149661
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|||||||||| || || | ||| | ||||| ||
Sbjct 1149662 TTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 1149696
>seq2624
Length=565299
Score = 154 bits (170), Expect = 4e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| || || || |||||||| ||||| || || |||| ||||| || |||| || |
Sbjct 25776 AGCCTGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGG 25835
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
||||| || | |||||| ||||||||||| || || || ||||| || || ||||| |||
Sbjct 25836 CCATCCTCCAACTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCC 25895
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||||||| ||||| ||||| |||| || || || | ||||
Sbjct 25896 TTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTG 25955
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| |||||||| ||||| || || | ||| | |||||
Sbjct 25956 ATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 25993
Score = 129 bits (142), Expect = 1e-24
Identities = 145/194 (75%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| || || ||||||||||| ||||| || || |||| ||||| || |||| || |
Sbjct 26004 AGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGG 26063
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
||||| || |||||||| || || || || || || || ||||| || ||||| || |||
Sbjct 26064 CCATCCTCCAGCTGCTTGCCTGCAAAAATCAGACGCTGCTGGTCTGGGGGAATGCCCTCC 26123
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||| || ||||||||||| |||| || || || | |||
Sbjct 26124 TTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTG 26183
Query 225676 ATCGTCTTGCCCGT 225689
|| |||||||| ||
Sbjct 26184 ATGGTCTTGCCGGT 26197
>seq1848
Length=11040
Score = 152 bits (168), Expect = 1e-31
Identities = 152/197 (77%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| ||||||||||| || |||| ||||| || |||| || | |||||
Sbjct 6301 AGCACCAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCC 6242
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || || ||||| || ||||| || ||||||||
Sbjct 6241 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 6182
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| ||||||||||| || | ||||| || | ||||| |||
Sbjct 6181 TGGATCTTGGCCTTGACATTATCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTC 6122
Query 225682 TTGCCCGTCAAAGTTTT 225698
||||| |||||||| ||
Sbjct 6121 TTGCCAGTCAAAGTCTT 6105
Score = 143 bits (158), Expect = 6e-29
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||| ||||| || || |||| ||||| ||||| | || | |||||
Sbjct 5617 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCC 5558
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| || ||||||||||| || || || ||||| || |||||||| ||||| ||
Sbjct 5557 TCCAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGAATACCCTCCTTATCC 5498
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| || || ||||||||||| |||| ||||| || | ||||| |||
Sbjct 5497 TGGATCTTAGCTTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTC 5438
Query 225682 TTGCCCGTCAAAGTTTT 225698
||||| ||||| || ||
Sbjct 5437 TTGCCGGTCAATGTCTT 5421
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||||||||| || || || || |||| ||||| ||||| | || | || ||
Sbjct 5845 AGGACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCC 5786
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| | ||||| ||||| || |||||||| ||||||||
Sbjct 5785 TCCAGCTGCTTGCCGGCAAAGATCAAGCGTTGCTGGTCCGGGGGAATACCCTCCTTGTCC 5726
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || || |||||||| || | ||||| || | ||||| |||
Sbjct 5725 TGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGAGTGATAGTC 5666
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||| ||| || | ||| | |||||
Sbjct 5665 TTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 5634
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||||||||| | || || || || |||| ||||| ||||| | || || |||||
Sbjct 6073 AGGACAAGGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCTGCCATCC 6014
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| | ||||| ||||| || || || || ||||||||
Sbjct 6013 TCCAGCTGCTTGCCGGCAAAGATCAAACGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 5954
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || || |||||||| || | || || || | ||||| |||
Sbjct 5953 TGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCTACCTCAAGAGTGATGGTC 5894
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||| ||| || | ||| | |||||
Sbjct 5893 TTGCCGGTCAGAGTCTTCACGAAGATCTGCAT 5862
>seq4493
Length=164055
Score = 149 bits (164), Expect = 1e-30
Identities = 151/197 (77%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||||||||| || || || || || |||| ||||| || || | ||| || |||||
Sbjct 96187 AGGACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTGCCATCC 96128
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || |||||||| || || ||||| || || || || |||||||||
Sbjct 96127 TCCAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 96068
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| || |||||||| |||| ||||| || | ||||| |||
Sbjct 96067 TGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTC 96008
Query 225682 TTGCCCGTCAAAGTTTT 225698
||||| ||||| || ||
Sbjct 96007 TTGCCAGTCAATGTCTT 95991
Score = 140 bits (154), Expect = 8e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| |||||||| || ||||| || || |||| ||||| || || | || || || ||
Sbjct 95731 AGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCC 95672
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||| |||||||| || || || || || ||||| || ||||||||
Sbjct 95671 TCCAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 95612
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| |||| ||||| || | ||||| |||
Sbjct 95611 TGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTC 95552
Query 225682 TTGCCCGTCAAAGTTTT 225698
||||| ||||| || ||
Sbjct 95551 TTGCCGGTCAATGTCTT 95535
>seq4294
Length=230714
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| || || || || || |||| ||||| ||||| | || | ||||||
Sbjct 45191 AGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGTCCATCT 45132
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || || ||||| |||||||| || ||||||||
Sbjct 45131 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCC 45072
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| |||||| ||||||||||| |||| ||||| || | |||||| |||
Sbjct 45071 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTC 45012
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || |||| || || | ||| | |||||
Sbjct 45011 TTCCCTGTCAGGGTCTTCACGAAGATCTGCAT 44980
>seq192
Length=981986
Score = 145 bits (160), Expect = 2e-29
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| || || || || || |||| || || ||||| | |||| |||||
Sbjct 849008 AGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGCGAGCGTTCGTCCATCC 848949
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || || ||||| ||||| || || ||||||||
Sbjct 848948 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 848889
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| |||||| ||||||||||| |||| ||||| || | |||||| |||
Sbjct 848888 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTC 848829
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| ||||||| || || | ||| | ||||| ||
Sbjct 848828 TTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 848794
>seq2778
Length=1391004
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||||||||| || ||||| || || |||| ||||| ||||| | || || |||||
Sbjct 174244 CAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATC 174303
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
|| |||||||| ||||| ||||| || || || ||||| || ||||| || ||||||||
Sbjct 174304 CTCCAGCTGCTTTCCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 174363
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|| ||||| |||||| || || |||||||| | || || || | ||||| ||
Sbjct 174364 CTGAATCTTGGCCTTCACGTTGTCAATCGTGTCTGATGACTCAACCTCAAGTGTGATGGT 174423
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||| || | ||| || | ||| | |||||
Sbjct 174424 CTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 174456
Score = 136 bits (150), Expect = 9e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || |||||||| || || || || |||| ||||| || || | || || |||||
Sbjct 174017 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCC 174076
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
||||||||||| ||||||||||| || || || ||||| | ||||| || ||||||||
Sbjct 174077 TCTAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTAGGGGAATGCCCTCCTTGTCC 174136
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| ||||||||||| ||| | || || || | || || ||
Sbjct 174137 TGGATCTTCGCCTTCACATTGTCGATGGTGTCAGAGCTCTCAACCTCCAGGGTAATAGTT 174196
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
||||| || | ||| || | || | ||||||
Sbjct 174197 TTGCCAGTGAGAGTCTTGACAAAAATCTGCATT 174229
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || |||||||| || || ||||| || | ||||| ||||| | || | |||||
Sbjct 173789 AGCACCAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGCAAGGGTACGGCCATCC 173848
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| || || || ||||| || || ||||||||||||||
Sbjct 173849 TCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCTGGGGGGATACCTTCCTTGTCC 173908
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||||||| ||||||||||| ||| | || || || | | || |||
Sbjct 173909 TGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAGCTCTCAACCTCCAGAATAATGGTC 173968
Query 225682 TTGCCCGTCAAAGTTTT 225698
||||| || | ||| ||
Sbjct 173969 TTGCCTGTGAGAGTCTT 173985
Score = 114 bits (126), Expect = 3e-20
Identities = 138/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||| ||||| || || |||| ||||| || || | || | || |||
Sbjct 175296 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGTGTGCGTCCGTCT 175355
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || || || || || || || || || ||||||||
Sbjct 175356 TCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGGGGGATTCCCTCCTTGTCC 175415
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || || ||||| || |||| || || || | || || |||
Sbjct 175416 TGGATCTTGGCCTTGACGTTGTCAATGGTATCCGAGGACTCAACCTCGAGGGTTATGGTC 175475
Query 225682 TTGCCCGT 225689
||||| ||
Sbjct 175476 TTGCCAGT 175483
>seq2770
Length=3071
Score = 107 bits (118), Expect = 5e-18
Identities = 108/139 (78%), Gaps = 1/139 (1%)
Strand=Plus/Plus
Query 7724 TATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGC 7783
||| || |||| ||||||| || | ||||| |||| ||||||||||||| |||||||||
Sbjct 1397 TATGTCAAGGGCTGGTAAGGTTTTGCGCGTTGTATCGAATTAAACCACATGCTCCACCGC 1456
Query 7784 TTATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG 7843
|| | || | |||||| || |||||||||| |||||| |||| | | |||| ||
Sbjct 1457 TTGTGCAGGCCCCCGTCAATTCCTTTGAGTTTCGGTCTTGCGACCGTACTCCCCAGGCGG 1516
Query 7844 AATATTT-ACGCGTTAGCT 7861
| | ||| |||||||||||
Sbjct 1517 AGTGTTTCACGCGTTAGCT 1535
Score = 86.0 bits (94), Expect = 1e-11
Identities = 89/113 (79%), Gaps = 3/113 (3%)
Strand=Plus/Minus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| ||||||||||||| ||||||||| | |||||||| | || ||| | |||||
Sbjct 2071 TGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAG 2013
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATGTTACGTGA 6878
|||||| |||| || ||||||||| |||| ||||| || ||| |||||
Sbjct 2012 CAGTGGGGAATTTTCCGCAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGA 1960
>seq1114
Length=1590138
Score = 96.9 bits (106), Expect = 8e-15
Identities = 64/71 (90%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696
|| |||||||||||||||| |||||||||||||||| ||||||| |||| ||||||||||
Sbjct 1023617 AGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATA 1023558
Query 372697 GGGTCTGACAC 372707
| ||||||||
Sbjct 1023557 GACTCTGACAC 1023547
>seq4281
Length=255066
Score = 93.3 bits (102), Expect = 1e-13
Identities = 87/111 (78%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| || |||||||| || || | | ||| |||||||| || | || ||
Sbjct 1787 AGCACCAGGTGTAGCGTGGATTCCTTCTGAATGTCGTAGTCGGCCAAGGTGCGGCCGTCC 1728
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
|| ||||||||||| |||||||| || || || |||||||||||||| |||
Sbjct 1727 TCCAGCTGCTTCCCCGCGAAGATGAGCCGCTGCTGGTCGGGCGGAATTCCT 1677
>seq348
Length=941607
Score = 91.5 bits (100), Expect = 4e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| |||||||| | ||||||||||| ||||| || | |||||||| || || || |
Sbjct 470063 AGCCTCAGGACCAAATGGAGAGTGGACTCTTTCTGAATGTTGTAATCAGCTAATGTGTGC 470004
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|||||||| | |||||||| || || || || | ||| || || || |||||||| ||
Sbjct 470003 CCATCTTCCAATTGCTTCCCTGCAAAAATCAGCCTTTGCTGATCTGGGGGAATACCCTCT 469944
Query 225616 TTGTCTTG 225623
||||| ||
Sbjct 469943 TTGTCCTG 469936
>seq581
Length=926953
Score = 84.2 bits (92), Expect = 5e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||| ||||| || || |||| ||||| || |||| || | || ||
Sbjct 35830 AGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTCC 35889
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
|| ||||||||||| |||||||| || || || ||||| || || || |||
Sbjct 35890 TCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCT 35940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192462106978268
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |