Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zizania_20latifolia_20[genbank_20GCA_5F000418225.1_202013-07-09]
4,522 sequences; 603,989,347 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq4493 149 1e-30
seq2778 143 6e-29
seq1848 140 7e-28
seq3577 127 5e-24
seq4197 125 2e-23
seq891 122 2e-22
seq192 120 7e-22
seq2624 116 9e-21
seq4294 114 3e-20
seq1148 98.7 2e-15
seq4146 95.1 3e-14
seq2570 86.0 1e-11
seq1692 84.2 5e-11
>seq4493
Length=164055
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | ||||||||| ||||| || ||||| || ||||||||||| || || | |||
Sbjct 96197 CCTGAGGCGGAGGACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGAGT 96138
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
|| ||||| || || || ||||| |||||||| | ||||||||| | | ||| ||
Sbjct 96137 CCTGCCATCCTCCAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCC 96078
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| ||||| || || |||||| | || | | |||| || ||| || |||||
Sbjct 96077 CTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGGACTCCACCTCAAG 96018
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| ||||| || | |||||||| |||| ||||||
Sbjct 96017 GGTGATAGTCTTGCCAGTCAATGTCTTCACAAAGATCTGCAT 95976
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | ||||||||||||||| || ||||| || ||||||||||| || || | ||
Sbjct 95969 CCTGAGGCGGAGGACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGGGT 95910
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || || ||||| ||||| || | ||||||||||| | || ||
Sbjct 95909 GCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGAATACC 95850
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| || || || || ||||| | || | | |||| ||| ||| || || ||
Sbjct 95849 CTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCAGAAGACTCCACCTCGAG 95790
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| ||||| || |||||||| ||||||| ||||||
Sbjct 95789 GGTGATAGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 95748
Score = 107 bits (118), Expect = 4e-18
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | ||| ||||| ||||| || ||||| || ||||||||||| || || | ||
Sbjct 95741 CCTGAGACGGAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGT 95682
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
|| || || || || || || || |||||||| | |||||| || | | || ||
Sbjct 95681 CCTGCCGTCCTCCAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGATCTGGGGGAATGCC 95622
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| || || || || ||||| | || | | |||| || ||| || |||||
Sbjct 95621 CTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAG 95562
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| ||||| || | |||||||| || | ||||||
Sbjct 95561 GGTGATAGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 95520
>seq2778
Length=1391004
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | ||| || || || || ||||||||||| || |||||||| ||||| | ||
Sbjct 173779 CCTGAGGCGGAGCACCAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGCAAGGGT 173838
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| ||||| || || || ||||| ||||| || | ||||||||| | | ||| ||
Sbjct 173839 ACGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCTGGGGGGATACC 173898
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
|||||| || ||||| || || ||| | || | | |||| || ||||| || || ||
Sbjct 173899 TTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAGCTCTCAACCTCCAG 173958
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| |||| || ||||| ||||||||||| || |||| ||||||
Sbjct 173959 AATAATGGTCTTGCCTGTGAGAGTCTTGACAAAGATCTGCAT 174000
Score = 134 bits (148), Expect = 3e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | ||| || || || || || ||||| || ||||||||||| || || | ||
Sbjct 174007 CCTGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGT 174066
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
|| ||||| ||||| || || |||||||| || | ||||||||| | || ||
Sbjct 174067 CCTACCATCCTCTAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTAGGGGAATGCC 174126
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| || || || || || ||| | || | | |||| || ||||| || || ||
Sbjct 174127 CTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCAGAGCTCTCAACCTCCAG 174186
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACCC 152111
|||||||||||||| ||||||||||| || || | ||||||| ||||
Sbjct 174187 GGTAATAGTTTTGCCAGTGAGAGTCTTGACAAAAATCTGCATTCCACCC 174235
Score = 132 bits (146), Expect = 1e-25
Identities = 165/224 (74%), Gaps = 4/224 (2%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | |||||||| ||||| || ||||| || ||||||||||| ||||| | ||
Sbjct 174235 CCTGAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGT 174294
Query 151943 TCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATT 152000
|| ||||| || || ||||| || || ||||| || | ||||||||| | | ||
Sbjct 174295 CCTGCCATCCTCCAGCTGCTTT--CCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATG 174352
Query 152001 CCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCA 152060
|| ||||| || ||||| || || || | || | ||||||| ||| || |||
Sbjct 174353 CCCTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCAATCGTGTCTGATGACTCAACCTCA 174412
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||| ||||||||||| ||||||| ||||||
Sbjct 174413 AGTGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 174456
Score = 116 bits (128), Expect = 9e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | |||||| || || || || ||||| || ||||||||||| || || | ||
Sbjct 175286 CCTGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGTGT 175345
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| || ||||| || || || |||||||| || | |||||| |||| | ||||||
Sbjct 175346 GCGTCCGTCTTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGGGGGATTCC 175405
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| || || || || ||||| | || | | | || || ||| || || ||
Sbjct 175406 CTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTATCCGAGGACTCAACCTCGAG 175465
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| ||||| |||||||| |||| ||||||
Sbjct 175466 GGTTATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 175507
>seq1848
Length=11040
Score = 140 bits (154), Expect = 7e-28
Identities = 164/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | ||||||||| || | || ||||| || ||||||||||| ||||| | ||
Sbjct 6083 CCTAAGACGGAGGACAAGGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGT 6024
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
|| ||||| || || || ||||| ||||| | | |||||||||| | ||| ||
Sbjct 6023 CCTGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAAACGTTGCTGGTCCGGAGGGATGCC 5964
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| || || || || ||||| | || | | |||| ||| |||||| |||||
Sbjct 5963 CTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCTACCTCAAG 5904
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || || ||||| || |||||||||||||||| ||||||
Sbjct 5903 AGTGATGGTCTTGCCGGTCAGAGTCTTCACGAAGATCTGCAT 5862
Score = 138 bits (152), Expect = 3e-27
Identities = 166/223 (74%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | ||||||||| || || |||||||| || ||||||||||| ||||| | ||
Sbjct 5855 CCTGAGGCGGAGGACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGT 5796
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGAT-AAGCCTCTGCTGGTCCGCCGAGATTC 152001
| || || || || || ||||| ||||| |||| | |||||||||| | || |
Sbjct 5795 GCGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAGCGT-TGCTGGTCCGGGGGAATAC 5737
Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061
| ||||| || || || || ||||| | || | | |||| ||| ||| || ||||
Sbjct 5736 CCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAA 5677
Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||| ||||| ||||| || |||||||| ||||||| ||||||
Sbjct 5676 GAGTGATAGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 5634
Score = 125 bits (138), Expect = 2e-23
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || || |||||||| || || || ||||||||||| || || | || |
Sbjct 6308 GAGGCGGAGCACCAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCG 6249
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || ||||||||||| || | ||||||||||| | || || ||
Sbjct 6248 GCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTC 6189
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || |||||| | || | | |||| ||| ||| || ||||| ||
Sbjct 6188 CTTGTCCTGGATCTTGGCCTTGACATTATCGATGGTGTCGGAAGACTCCACCTCAAGGGT 6129
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||| || | ||||||||| || | ||||||
Sbjct 6128 GATAGTCTTGCCAGTCAAAGTCTTCACAAAAATCTGCAT 6090
Score = 116 bits (128), Expect = 9e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | |||||| || || || || ||||| || ||||||||||| ||||| | ||
Sbjct 5627 CCTGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGT 5568
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| ||||| || || ||| || |||||||| || | ||||||||| | | || ||
Sbjct 5567 GCGGCCATCCTCCAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGAATACC 5508
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| || || || || |||||| | || | | |||| || ||| || || ||
Sbjct 5507 CTCCTTATCCTGGATCTTAGCTTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCGAG 5448
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| ||||| || | |||||||| || | ||||||
Sbjct 5447 GGTGATAGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 5406
>seq3577
Length=483236
Score = 127 bits (140), Expect = 5e-24
Identities = 163/225 (72%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || || || || || ||||| || ||||||||||| ||||| | || |
Sbjct 183943 GAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCG 183884
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || ||||||||||| || | ||||||||||| || ||| || ||
Sbjct 183883 GCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTC 183824
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || || || | || | | ||||||| ||| || || | ||
Sbjct 183823 CTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCTGAGGACTCCACCTCCAACGT 183764
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110
|| || |||||||| || ||||||||||||| |||||| || ||
Sbjct 183763 GATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTTGCC 183719
>seq4197
Length=262831
Score = 125 bits (138), Expect = 2e-23
Identities = 161/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| ||||||||||| || || || ||||| || ||||||||||| || || | ||
Sbjct 76132 CCTGAGCCTGAGGACAAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCCAGGGT 76073
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| ||||| || || ||| || || ||||| || | ||||||||||| | ||| ||
Sbjct 76072 GCGGCCATCCTCAAGCTGTTTGCCTGCAAAGATGAGACGCTGCTGGTCCGGGGGGATACC 76013
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| || || || || ||||| | || | | |||| || ||| || || ||
Sbjct 76012 CTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCCAG 75953
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || | ||||||||||||| ||||||
Sbjct 75952 GGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 75911
Score = 122 bits (134), Expect = 2e-22
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| ||||| ||||| || || || ||||| || ||||||||||| ||||| | ||
Sbjct 75904 CCTGAGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGTGT 75845
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| ||||| || || || || |||||||| || | ||||||||| | | || ||
Sbjct 75844 GCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCC 75785
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| || || || || ||||| | || | | |||| || ||| || || ||
Sbjct 75784 CTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAG 75725
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| ||||| |||||||| |||| ||||||
Sbjct 75724 GGTGATGGTCTTGCCGGTGAGTGTCTTCACAAAGATCTGCAT 75683
Score = 122 bits (134), Expect = 2e-22
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| ||||| || || ||||| || ||||| || ||||||||||| || || | ||
Sbjct 76588 CCTGAGCCTGAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGT 76529
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| ||||| || || || || || ||||| || | ||||||||||| | ||| ||
Sbjct 76528 GCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCC 76469
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| || || || || || ||| | || | ||||||| ||| || |||||
Sbjct 76468 CTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATTGTGTCTGATGACTCAACCTCAAG 76409
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || |||||||| || |||| ||||||
Sbjct 76408 GGTGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 76367
Score = 104 bits (114), Expect = 5e-17
Identities = 156/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| || || ||||| || || || ||||| || ||||||||||| ||||| | ||
Sbjct 76360 CCTGAGCCTAAGTACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGT 76301
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| ||||| || || || || |||||||| || | ||| ||||| | | ||| ||
Sbjct 76300 GCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGGTCTGGGGGGATACC 76241
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| || || || || || ||| | || | |||| || ||| || |||||
Sbjct 76240 CTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCCGAGGACTCGACCTCAAG 76181
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || || ||||| || || | ||||||
Sbjct 76180 TGTGATGGTCTTGCCAGTCAGGGTCTTGACAAAAATCTGCAT 76139
Score = 98.7 bits (108), Expect = 2e-15
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || || || || || ||||| || ||||| |||||||| || | || |
Sbjct 76813 GAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCCGCAAGGGTGCG 76754
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || || ||||| || | ||||||||||| | ||| || ||
Sbjct 76753 GCCATCCTCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTC 76694
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| ||||| || || || || | || | |||| || ||| || || || ||
Sbjct 76693 CTTGTCTTGGATCTTGGCCTTCACGTTGTCAATTGTGTCAGACGACTCAACCTCCAGGGT 76634
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| |||||||| || | |||||||| |||| ||||||
Sbjct 76633 GATTGTTTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 76595
>seq891
Length=1582050
Score = 122 bits (134), Expect = 2e-22
Identities = 162/225 (72%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || || || || || ||||| || ||||||||||| ||||| | || |
Sbjct 1149475 GAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCG 1149534
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || ||||||||||| || | ||||||||||| || ||| || ||
Sbjct 1149535 GCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTC 1149594
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || || || | || | | |||| || ||| || || | ||
Sbjct 1149595 CTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGGACTCCACCTCCAACGT 1149654
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110
|| || |||||||| || ||||||||||||| |||||| || ||
Sbjct 1149655 GATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTTGCC 1149699
>seq192
Length=981986
Score = 120 bits (132), Expect = 7e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || || || || || ||||| || |||||||| || ||||| | |||| |||||
Sbjct 849009 GAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGCGAGCGTTCGTCCATC 848950
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||||||||| || | ||||||||||| || ||| || ||||| ||
Sbjct 848949 CTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 848890
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || || || | || | | |||| || ||| || || || || || ||
Sbjct 848889 CTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGT 848830
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| ||||| || ||||||||||||| |||||| ||
Sbjct 848829 CTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 848794
>seq2624
Length=565299
Score = 116 bits (128), Expect = 9e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| ||||| |||||||| || |||||||| || || ||||||||||| || | ||
Sbjct 25544 CCTGAGCCTGAGCACAAGATGGAGTGTAGACTCCTTCTGAATGTTGTAATCAGCCAGGGT 25603
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| ||||| || || || || || ||||| || | ||||||||||| | ||| ||
Sbjct 25604 GCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACC 25663
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| || || || || || || | || | ||||||| || || |||||
Sbjct 25664 CTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCGATCGTGTCTGAGGATTCGACCTCAAG 25723
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || ||||| || | ||||| || |||| ||||||
Sbjct 25724 CGTAATTGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 25765
Score = 107 bits (118), Expect = 4e-18
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| ||||| || || || || || ||||| || ||||||||||| || || | ||
Sbjct 25772 CCTGAGCCTGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGT 25831
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| ||||| || | || || |||||||| || | ||||||||||| | ||| ||
Sbjct 25832 GCGGCCATCCTCCAACTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACC 25891
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| || || || || || ||| | || | |||| || ||| || |||||
Sbjct 25892 CTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCCGAGGACTCGACCTCAAG 25951
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || | ||||| ||||||| ||||||
Sbjct 25952 CGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 25993
Score = 105 bits (116), Expect = 2e-17
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| ||||| ||||| || || || ||||| || ||||||||||| || || | ||
Sbjct 26001 CTGAGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTG 26060
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| ||||| || || || || || || || || | ||||||||| | | || ||
Sbjct 26061 CGGCCATCCTCCAGCTGCTTGCCTGCAAAAATCAGACGCTGCTGGTCTGGGGGAATGCCC 26120
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || || || ||||| | || | | |||| || ||| || || ||
Sbjct 26121 TCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCCGAGGACTCAACCTCGAGG 26180
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| ||||| |||||||| |||| ||||||
Sbjct 26181 GTGATGGTCTTGCCGGTGAGTGTCTTCACAAAGATCTGCAT 26221
Score = 104 bits (114), Expect = 5e-17
Identities = 156/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| || || || || || || || ||||| || ||||||||||| || || | ||
Sbjct 25316 CCTGAGCCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGT 25375
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| || || || || || || ||||| || || | ||||||||||| | ||| ||
Sbjct 25376 GCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGGGGGATGCC 25435
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| || || || || || ||| | || | ||||||| ||| || |||||
Sbjct 25436 CTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCTGAGGACTCAACCTCAAG 25495
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || || ||||| || |||| ||||||
Sbjct 25496 GGTGATGGTCTTGCCGGTCAGGGTCTTGACAAAGATCTGCAT 25537
Score = 93.3 bits (102), Expect = 1e-13
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || || || || || ||||| || ||||||||||| ||||| | || |
Sbjct 25091 GAGGCGGAGCACCAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCG 25150
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || || || || || | ||||||||||| | || || ||
Sbjct 25151 GCCATCCTCCAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTC 25210
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || || || | || | |||| || ||| || ||||||||
Sbjct 25211 CTTGTCCTGGATCTTGGCCTTCACGTTGTCAATCGTGTCAGATGACTCGACCTCAAGAGT 25270
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || | ||||| ||||||| ||||||
Sbjct 25271 GATGGTCTTGCCAGTCAATGTCTTGACGAAGATCTGCAT 25309
>seq4294
Length=230714
Score = 114 bits (126), Expect = 3e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || || || || || ||||| || ||||||||||| ||||| | || | |||||
Sbjct 45192 GAGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGTCCATC 45133
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
||| || || ||||||||||| || | ||||||||||| || || || ||||| ||
Sbjct 45132 TTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGAATGCCCTCCTTGTC 45073
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || || || | || | | |||| || ||| || || || || || ||
Sbjct 45072 CTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGT 45013
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||||||||||| ||||||
Sbjct 45012 CTTCCCTGTCAGGGTCTTCACGAAGATCTGCAT 44980
>seq1148
Length=724074
Score = 98.7 bits (108), Expect = 2e-15
Identities = 155/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| || || || || ||||| || |||| | ||| | ||| | | |
Sbjct 119722 GAGGCGGAGGACGAGGTGCAGCGTCGACTCCTTCTGGACGCCGTAGTAGGCCAGCATGCG 119781
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
| || || || |||||||||||||| |||| ||||||||||| || ||| || ||
Sbjct 119782 GACGTCCTCCAGCTACTTCCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTC 119841
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || || || |||| || |||| || ||| || || || |
Sbjct 119842 CTTGTCCTGGATCTTCGACTTCACGTTCTCCACCGTGTCCGACGGCTCCACCTCCAGGAT 119901
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| || ||||| || || ||||||||||||| |||||| ||
Sbjct 119902 CACCGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCATCTT 119943
>seq4146
Length=1227772
Score = 95.1 bits (104), Expect = 3e-14
Identities = 96/123 (78%), Gaps = 4/123 (3%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| |||||||| || || || || ||||| || ||||||||||| || || | || |
Sbjct 327869 GAGCCTGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCG 327810
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
||||| || || ||||| ||||||||||| |||| ||||||||||| || |||||||
Sbjct 327809 TCCATCCTCCAGCTGCTTT--CCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATTCCT 327752
Query 152004 TCC 152006
||
Sbjct 327751 GCC 327749
>seq2570
Length=608568
Score = 86.0 bits (94), Expect = 1e-11
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|| |||||||| || || || || ||||| || ||||||||||| || || | || | |
Sbjct 261054 AGCCTGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGC 260995
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|| || || || || ||||||||||| |||| |||||| |||| || ||||||| ||
Sbjct 260994 CCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGATCCGGCGGGATTCCTGCC 260935
>seq1692
Length=674084
Score = 84.2 bits (92), Expect = 5e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| || ||||| | ||| || || |||||||| || ||||||||||| ||||| ||
Sbjct 587141 CCTGAGCCTCAGGACCAAATGGAGTGTTGACTCTTTCTGAATGTTGTAATCAGCTAATGT 587200
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| ||||||||| | ||||| || || || ||||| ||||| || | | || ||
Sbjct 587201 GCGCCCATCTTCCAATTGCTTCCCTGCAAAAATCAGCCTTTGCTGATCTGGGGGAATGCC 587260
Query 152003 TTCCTTTTCTTGAA 152016
|| || || ||||
Sbjct 587261 CTCTTTGTCCTGAA 587274
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153753949786262
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |