Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zizania_20latifolia_20[genbank_20GCA_5F000418225.1_202013-07-09]
4,522 sequences; 603,989,347 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq891 163 2e-35
seq3577 158 9e-34
seq4294 156 3e-33
seq192 154 1e-32
seq1848 145 5e-30
seq2624 141 7e-29
seq4197 138 8e-28
seq2778 136 3e-27
seq4493 131 1e-25
seq1148 111 1e-19
seq2570 95.1 9e-15
seq581 87.8 1e-12
seq1042 86.0 5e-12
seq359 86.0 5e-12
>seq891
Length=1582050
Score = 163 bits (180), Expect = 2e-35
Identities = 162/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| |||||| |||||| ||||||||||| |||||||| ||| | || ||
Sbjct 1149484 CACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTC 1149543
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||| ||||| | |||||||| || | || | || ||||| |||
Sbjct 1149544 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 1149603
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | |||||||| | ||| |||||||||| ||| || |||||
Sbjct 1149604 GATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGGACTCCACCTCCAACGTGATGGTCTT 1149663
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||||||||||||||| |||||
Sbjct 1149664 GCCCGTCAGGGTCTTCACGAAGATCTGCAT 1149693
>seq3577
Length=483236
Score = 158 bits (174), Expect = 9e-34
Identities = 161/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| || ||| |||||| ||||||||||| |||||||| ||| | || ||
Sbjct 183934 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTC 183875
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||| ||||| | |||||||| || | || | || ||||| |||
Sbjct 183874 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 183815
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | |||||||| | ||| |||||||||| ||| || |||||
Sbjct 183814 GATCTTGGCCTTCACGTTGTCGATGGTGTCTGAGGACTCCACCTCCAACGTGATGGTCTT 183755
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||||||||||||||| |||||
Sbjct 183754 GCCCGTCAGGGTCTTCACGAAGATCTGCAT 183725
>seq4294
Length=230714
Score = 156 bits (172), Expect = 3e-33
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| || || |||||| ||||||||||| |||||||| ||| | || |||
Sbjct 45188 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGTCCATCTTCC 45129
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| ||||| | ||||||||| || | || | || ||||| |||
Sbjct 45128 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGG 45069
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | |||||||| | ||| |||||||||| ||| || |||||
Sbjct 45068 ATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTC 45009
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||||||||||||||| |||||
Sbjct 45008 CCTGTCAGGGTCTTCACGAAGATCTGCAT 44980
>seq192
Length=981986
Score = 154 bits (170), Expect = 1e-32
Identities = 160/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| || || |||||| |||||||| || |||||||| || | || ||
Sbjct 849006 CACCAGGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGCGAGCGTTCGTCCATCCTC 848947
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| ||||| ||||| | ||||||||| || | || | || ||||| |||
Sbjct 848946 CAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 848887
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | |||||||| | ||| |||||||||| ||| || |||||
Sbjct 848886 GATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTT 848827
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||||||||||||||| |||||
Sbjct 848826 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 848797
>seq1848
Length=11040
Score = 145 bits (160), Expect = 5e-30
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || |||||| ||||||||||| |||||||| ||| |||| |||
Sbjct 5842 ACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCC 5783
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| |||||||||||||| || ||||| || | || | ||| ||||| |||
Sbjct 5782 AGCTGCTTGCCGGCAAAGATCAAGCGTTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGG 5723
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||||| || |||||||| | || || |||||
Sbjct 5722 ATCTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGAGTGATAGTCTTG 5663
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| || || ||||| |||||||| ||||||
Sbjct 5662 CCGGTCAGAGTCTTGACGAAGATCTGCATG 5633
Score = 134 bits (148), Expect = 1e-26
Identities = 148/195 (76%), Gaps = 4/195 (2%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCA 44203
|||||| ||||||||||| |||||||| || || | || ||||||||||| ||||||
Sbjct 6053 CTCCTTCTGGATGTTGTAGTCGGCGAG--GGTCCTGCCATCCTCCAGCTGCTTGCCGGCA 5996
Query 44204 AAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAAT 44263
||||||||||| ||||| || | ||| | || ||||| ||| ||||| ||| |
Sbjct 5995 AAGATCAAACGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 5936
Query 44264 GTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323
| | |||||||||| || || ||||| | || || ||||| || || || ||||||
Sbjct 5935 TTGTCAATGGTGTCGGAAGACTCTACCTCAAGAGTGATGGTCTTGCCGGTCAGAGTCTTC 5876
Query 44324 ACGAAGATTTGCATG 44338
|||||||| ||||||
Sbjct 5875 ACGAAGATCTGCATG 5861
Score = 123 bits (136), Expect = 2e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| |||||| ||||||||||| |||||||| ||| | || |||
Sbjct 5614 ACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCC 5555
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || || || ||||| | ||||||||| || | || | ||| ||||| |||
Sbjct 5554 AGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGG 5495
Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| |||| | ||| | |||||||| | ||| |||||||| | || || |||||
Sbjct 5494 ATCTT-AGCTTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTT 5436
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | |||||||| || || |||||
Sbjct 5435 GCCGGTCAATGTCTTCACAAAAATCTGCAT 5406
Score = 123 bits (136), Expect = 2e-23
Identities = 154/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
|||||||||||| ||| ||||| ||||||||||| || || || ||| | || ||
Sbjct 6299 CACCAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCCTC 6240
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| ||||| ||||| | ||||||||| || | || | || ||||| |||
Sbjct 6239 CAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTG 6180
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | |||||||||| || |||||||| | || || |||||
Sbjct 6179 GATCTTGGCCTTGACATTATCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTT 6120
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| || | |||||||| || || ||||||
Sbjct 6119 GCCAGTCAAAGTCTTCACAAAAATCTGCATG 6089
>seq2624
Length=565299
Score = 141 bits (156), Expect = 7e-29
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || || | ||| ||||| || ||| |||||| ||||||||||| ||
Sbjct 25991 CATCCCTCCTCTGAGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 26050
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || ||||||||||| || ||||| |||| ||||||||| ||||
Sbjct 26051 CGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAAATCAGACGCTGCTGGTCTGG 26110
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||| | | | |||||||| | ||| ||
Sbjct 26111 GGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCCGAGGACTC 26170
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || || ||||| || ||||| |||||||| ||||| |||||
Sbjct 26171 AACCTCGAGGGTGATGGTCTTGCCGGTGAGTGTCTTCACAAAGATCTGCAT 26221
Score = 140 bits (154), Expect = 2e-28
Identities = 170/232 (73%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || || | ||| || || || || |||||| || |||||||||||
Sbjct 25535 CATACCTCCCCTGAGCCTGAGCACAAGATGGAGTGTAGACTCCTTCTGAATGTTGTAATC 25594
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || ||||||||||| || |||||||| | ||||||||| || |
Sbjct 25595 AGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGG 25654
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
||| | ||| ||||| ||| ||||| ||||| | | || ||||| | ||||||
Sbjct 25655 AGGGATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCGATCGTGTCTGAGGATTC 25714
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| | |||||| ||||| || || | |||||| || ||||| ||||||
Sbjct 25715 GACCTCAAGCGTAATTGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCATG 25766
Score = 132 bits (146), Expect = 3e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || || | ||| ||||| || ||| |||||| ||||||||||| ||
Sbjct 25763 CATGCCTCCCCTGAGCCTGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 25822
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || |||| |||||| || || ||||| | ||||||||| || |
Sbjct 25823 CGCCAGGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGG 25882
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
||| | ||| ||||| ||| ||||| ||||| | | || ||||| | ||| ||
Sbjct 25883 AGGGATACCCTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCCGAGGACTC 25942
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | ||| || ||||| || || | |||||| |||||||| |||||
Sbjct 25943 GACCTCAAGCGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 25993
Score = 129 bits (142), Expect = 4e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || |||| ||||||||| || ||| |||||| ||||||||||| ||
Sbjct 25307 CATACCACCCCTGAGCCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 25366
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| |||| || |||||||| || || || || | ||||||||| || |
Sbjct 25367 AGCCAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGG 25426
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||||| | | || ||||| | ||| ||
Sbjct 25427 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCTGAGGACTC 25486
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || || ||||| || || |||||||| || ||||| |||||
Sbjct 25487 AACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACAAAGATCTGCAT 25537
Score = 118 bits (130), Expect = 8e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| || || |||||| ||||||||||| ||||| || ||| | || ||
Sbjct 25100 CACCAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTC 25159
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| || ||||| |||| ||||||||| || | || | || ||||| |||
Sbjct 25160 CAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTG 25219
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | || ||||| | || || ||||| | || || |||||
Sbjct 25220 GATCTTGGCCTTCACGTTGTCAATCGTGTCAGATGACTCGACCTCAAGAGTGATGGTCTT 25279
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||||| |||||||| |||||
Sbjct 25280 GCCAGTCAATGTCTTGACGAAGATCTGCAT 25309
>seq4197
Length=262831
Score = 138 bits (152), Expect = 8e-28
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || || | ||| ||||| || ||| |||||| ||||||||||| ||
Sbjct 75913 CATGCCTCCCCTGAGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 75854
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
||| ||| ||| | || || |||||||| || || ||||| | ||||||||| ||||
Sbjct 75853 GGCCAGTGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGG 75794
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||| | | | |||||||| | ||| ||
Sbjct 75793 GGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCCGAGGACTC 75734
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || || ||||| || ||||| |||||||| ||||| |||||
Sbjct 75733 AACCTCGAGGGTGATGGTCTTGCCGGTGAGTGTCTTCACAAAGATCTGCAT 75683
Score = 125 bits (138), Expect = 5e-24
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || || | || ||||| || || |||||| ||||||||||| ||
Sbjct 76141 CATCCCTCCCCTGAGCCTGAGGACAAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTC 76082
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || || ||||| || || |||||||| | ||||||||| || |
Sbjct 76081 AGCCAGGGTGCGGCCATCCTCAAGCTGTTTGCCTGCAAAGATGAGACGCTGCTGGTCCGG 76022
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | ||| ||||| ||| ||||| ||| | | | |||||||| | ||| ||
Sbjct 76021 GGGGATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCCGAGGACTC 75962
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||| || || ||||| || || | ||||||||||||||| ||||||
Sbjct 75961 AACCTCCAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATG 75910
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || || | ||||||||||| ||| |||||| ||||||||||| ||
Sbjct 76597 CATCCCACCCCTGAGCCTGAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 76538
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || || |||||||| || |||||||||| ||||||||| || |
Sbjct 76537 AGCAAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGG 76478
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||||| | | || ||||| | || ||
Sbjct 76477 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATTGTGTCTGATGACTC 76418
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || || ||||| || || || ||||| || ||||| |||||
Sbjct 76417 AACCTCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 76367
Score = 120 bits (132), Expect = 2e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || || | || ||||| || ||| |||||| ||||||||||| ||
Sbjct 76369 CATACCTCCCCTGAGCCTAAGTACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 76310
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
||| || ||| | || || |||||||| || || ||||| | |||||| || ||||
Sbjct 76309 GGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGGTCTGG 76250
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | ||| ||||| ||| ||||| ||||| | | || ||||| | ||| ||
Sbjct 76249 GGGGATACCCTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCCGAGGACTC 76190
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || || ||||| || || |||||||| || || || |||||
Sbjct 76189 GACCTCAAGTGTGATGGTCTTGCCAGTCAGGGTCTTGACAAAAATCTGCAT 76139
>seq2778
Length=1391004
Score = 136 bits (150), Expect = 3e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| || || ||| || || |||||||| ||||| || || | || ||
Sbjct 173791 CACCAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGCAAGGGTACGGCCATCCTC 173850
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| ||||||||||||| |||||||| |||| || | ||||||||| |||
Sbjct 173851 CAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCTGGGGGGATACCTTCCTTGTCCTG 173910
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | |||||||||| | || ||||||| |||| |||||
Sbjct 173911 AATCTTGGCCTTCACATTGTCGATGGTGTCGGAGCTCTCAACCTCCAGAATAATGGTCTT 173970
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| || ||||| |||||
Sbjct 173971 GCCTGTGAGAGTCTTGACAAAGATCTGCAT 174000
Score = 131 bits (144), Expect = 1e-25
Identities = 170/233 (73%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| || || || | || || |||||||| ||| |||||| ||||||||||| ||
Sbjct 174226 CATTCCACCCCTGAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 174285
Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
||| || || || | || ||||||||||| || |||||||| | |||||||| |||
Sbjct 174286 GGCAAG--GGTCCTGCCATCCTCCAGCTGCTTTCCAGCAAAGATGAGGCGCTGCTGGTCT 174343
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284
| || | || ||||| ||| ||||| ||||| | | || ||||| | ||
Sbjct 174344 GGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCAATCGTGTCTGATGAC 174403
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | || || ||||| || ||||| ||||| |||||||| |||||
Sbjct 174404 TCAACCTCAAGTGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 174456
Score = 129 bits (142), Expect = 4e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| |||||| ||||||||||| || || ||| ||| |||| ||
Sbjct 175299 ACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGTGTGCGTCCGTCTTCA 175358
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||| | |||||||||||| | || | || ||||| |||
Sbjct 175359 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGG 175418
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | ||||| || | ||| || ||||| | || || |||||
Sbjct 175419 ATCTTGGCCTTGACGTTGTCAATGGTATCCGAGGACTCAACCTCGAGGGTTATGGTCTTG 175478
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||||||||||||| ||||| |||||
Sbjct 175479 CCAGTGAGGGTCTTCACAAAGATCTGCAT 175507
Score = 109 bits (120), Expect = 4e-19
Identities = 165/233 (71%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || | | ||||||||| || || |||||| ||||||||||| ||
Sbjct 173998 CATACCACCCCTGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 174057
Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
|| || || || | || || |||||||| || || ||||| | ||||||||| |||
Sbjct 174058 AGCAAG--GGTCCTACCATCCTCTAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCT 174115
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284
|| | || ||||| ||| |||||| ||||| | | |||||||| | |
Sbjct 174116 AGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCAGAGCTC 174175
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||| ||||| || || || ||||| ||||| || || || |||||
Sbjct 174176 TCAACCTCCAGGGTAATAGTTTTGCCAGTGAGAGTCTTGACAAAAATCTGCAT 174228
Score = 91.5 bits (100), Expect = 1e-13
Identities = 116/158 (73%), Gaps = 4/158 (3%)
Strand=Plus/Plus
Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242
|| || || ||||| || |||||||| | ||||||||| || | ||| | || |||||
Sbjct 175125 TCCTCAAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTG 175184
Query 44243 TCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAA 44300
||| ||||| ||| || ||| | ||||| || | || |||||||| | || |
Sbjct 175185 TCCTGGATCTTTGCCTTGACATTGT--CAATGGTATCAGAAGACTCCACCTCGAGGGTGA 175242
Query 44301 TCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| ||||| || || | |||||| |||||||||||||||
Sbjct 175243 TAGTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCATG 175280
>seq4493
Length=164055
Score = 131 bits (144), Expect = 1e-25
Identities = 170/233 (73%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || | | ||| |||||||| ||| |||||| ||||||||||| ||
Sbjct 95750 CATGCCTCCCCTGAGACGGAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 95691
Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
|| || || || |||| ||||||||||| || |||||||| | |||||||||||||
Sbjct 95690 AGCAAG--GGTCCTGCCGTCCTCCAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGATCT 95633
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284
| || | || ||||| ||| ||||| ||| | | | |||||||| | |||
Sbjct 95632 GGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGAGGAC 95573
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| | || || ||||| || || | |||||||| || || |||||
Sbjct 95572 TCCACCTCAAGGGTGATAGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 95520
Score = 127 bits (140), Expect = 1e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || ||||| || |||||| ||||||||||| || || || ||| | || |||
Sbjct 95956 ACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCTTCC 95897
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||| | ||||||||| || | || | ||| ||||| |||
Sbjct 95896 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGG 95837
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||| | || |||||||| | || || |||||
Sbjct 95836 ATCTTAGCCTTGACGTTGTCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTG 95777
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| || || ||||| |||||||| ||||||
Sbjct 95776 CCAGTCAGAGTCTTGACGAAGATCTGCATG 95747
Score = 116 bits (128), Expect = 3e-21
Identities = 154/212 (73%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| || |||||| ||||||||||| || || || | | || |||
Sbjct 96184 ACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTGCCATCCTCC 96125
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||| | ||||||||| || | || | || ||||| ||
Sbjct 96124 AGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGG 96065
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | |||||||| | ||| |||||||| | || || ||||
Sbjct 96064 ATCTTGGCCTTGACATTGT--CAATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCT 96007
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| || || | |||||||| ||||| ||||||
Sbjct 96006 TGCCAGTCAATGTCTTCACAAAGATCTGCATG 95975
>seq1148
Length=724074
Score = 111 bits (122), Expect = 1e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| ||||| |||||| |||| | ||| | ||| || ||| |||| |||
Sbjct 119732 ACGAGGTGCAGCGTCGACTCCTTCTGGACGCCGTAGTAGGCCAGCATGCGGACGTCCTCC 119791
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||| ||||||||| ||||| | |||||||| || | || | || ||||| |||
Sbjct 119792 AGCTACTTCCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGG 119851
Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
|||||| ||||| |||| | | ||||| | | |||||||||| | | ||||||
Sbjct 119852 ATCTTCGACTTCAC-GTTCTCCACCGTGTCCGACGGCTCCACCTCCAGGATCACCGTCTT 119910
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || |||||||||||||| |||||
Sbjct 119911 GCCAGTCAGCGTCTTCACGAAGATCTGCAT 119940
>seq2570
Length=608568
Score = 95.1 bits (104), Expect = 9e-15
Identities = 78/95 (82%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| |||||| |||||| ||||||||||| || || || |||| |||| |||
Sbjct 261045 ACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGCCCGTCCTCC 260986
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|||||||| ||||| ||||||| |||||||||||
Sbjct 260985 AGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGATC 260951
>seq581
Length=926953
Score = 87.8 bits (96), Expect = 1e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| |||||| |||||| ||||||||||| || || || ||| |||| |||
Sbjct 35833 ACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTCCTCC 35892
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
|||||||||||||| ||||| | |||||||| || | |||
Sbjct 35893 AGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGG 35933
>seq1042
Length=22717
Score = 86.0 bits (94), Expect = 5e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || || || || | |||| |||||| || |||||| || |||||||| || ||
Sbjct 10599 CCACCCCTGAGCCTGAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGCC 10540
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
| | ||| | || |||| ||| || || ||||| ||||||||||| ||||||| |||
Sbjct 10539 AATGTGCGTCCATCCTCCAACTGTTTGCCAGCAAATATCAAACGCTGTTGATCTGGAGGA 10480
Query 44231 ACACCTTCCTTTTCC 44245
| |||||||| |||
Sbjct 10479 ATCCCTTCCTTGTCC 10465
>seq359
Length=971778
Score = 86.0 bits (94), Expect = 5e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || || || || | |||| |||||| || ||||| || |||||||| || ||
Sbjct 509648 CCACCCCTGAGCCTGAGGACCAAGTGAAGAGTTGATTCCTTCTGAATGTTGTAGTCAGCC 509589
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
||| ||| | || |||| |||||| || ||||| ||||||||||| ||||| | |||
Sbjct 509588 AGTGTGCGTCCATCCTCCAACTGCTTGCCAGCAAATATCAAACGCTGTTGATCCGGAGGA 509529
Query 44231 ACACCTTCCTTTTCC 44245
| |||||||| |||
Sbjct 509528 ATCCCTTCCTTGTCC 509514
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359970560254074
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |