Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zostera_20marina_20[genbank_20GCA_5F001185155.1_202015-07-22] 2,228 sequences; 203,913,826 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq59 95.1 1e-14 >seq59 Length=545433 Score = 95.1 bits (104), Expect = 1e-14 Identities = 297/455 (65%), Gaps = 19/455 (4%) Strand=Plus/Plus Query 16201 ACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAA 16260 ||| ||||||||||| || || ||||||||||| || | ||||||||| || || | Sbjct 359148 ACAGGCGAAGTCGCAGTGGAGGCCTTCGTCTCTCGATATCAATTCGTTGGAGAAGGTCAG 359207 Query 16261 CCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAA 16320 || ||||| || |||||||| | ||||||||||||| || || || || || Sbjct 359208 TCCAGGCATCAGACCGCGTTTCTTCAGCCAGAATATCGCACAGAAGCTTCCAGAGAAAAA 359267 Query 16321 TATACCCTCAACAGATGCAAAAGCGATTAATCGT-TCCGCGTACGTAGCATCTTTATTAC 16379 ||| || || || | |||||||| | |||| | || || | || || | | Sbjct 359268 TATCCCTTCCACGCAAGCAAAAGCCA-CAATCCTCTCAGCAAA---AGACTCCGCACCAT 359323 Query 16380 GAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCT 16439 |||||| | |||| || || |||| || | || || || || | ||| | Sbjct 359324 CGATCCATCGCATCGCCCAATCCGCCTTTTTCTTCACGCAGGGAATAGTCTCCACGGCGT 359383 Query 16440 ----TAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTG 16495 | || | || ||| | | || || | || || || | || | |||| Sbjct 359384 GGAAGAGACGAGTTTTCTCTGTGTTG----TCTTTGATGTAACACTCCAATAGAAGACTG 359439 Query 16496 TACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCC 16555 ||||| ||||| || |||||||| || || ||||||||||||||||| || |||||| Sbjct 359440 TACATCTCTGAATGGATGTTCTCGATAGCGATCTGAAATCCATAGAACGCGCGTGCCTCC 359499 Query 16556 GCTATTTGTA---CTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCA 16612 | | || | ||| || | ||||| | ||||| ||||| ||||| ||||| Sbjct 359500 GAGACCTGGACCTCTTTCATG---AATCGAACGGCCAGATTCTCGAGAACGATGCCGTCG 359556 Query 16613 CTTGCAGCAAAAAACGCCAATATGTGCTTAATGAA 16647 ||| ||||| || || | | ||| ||||||| Sbjct 359557 GATGCCGCAAAGAAAGCGAGAACGTGAGTAATGAA 359591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511400157108960