Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zostera_20marina_20[genbank_20GCA_5F001185155.1_202015-07-22] 2,228 sequences; 203,913,826 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq486 84.2 2e-11 >seq486 Length=444201 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || || || || | ||||||||||| || || | || || || ||| Sbjct 173623 ATGCAGATTTTCGTCAAGACGCTCACCGGCAAAACCATCACGTTAGAGGTTGAGTCGTCT 173564 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | || | ||||||| ||||||| | || ||||| | || |||||| Sbjct 173563 GACACCATCGACAATGTTAAGACAAAAATTCAAGATAAGGAAGGTATCCCACCAGACCAG 173504 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || ||||| || | ||| || || || |||||||| ||| || || |||| | Sbjct 173503 CAGCGTTTGATCTTTGCAGGTAAGCAGTTGGAAGATGGTCGCACTTTGGCTGACTACAAC 173444 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGT 25040 || ||||||||| |||| ||||| || || Sbjct 173443 ATTCAGAAAGAGTCCACTCTTCACTTGGT 173415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418292641477760