Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zostera_20marina_20[genbank_20GCA_5F001185155.1_202015-07-22] 2,228 sequences; 203,913,826 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq59 91.5 3e-13 >seq59 Length=545433 Score = 91.5 bits (100), Expect = 3e-13 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 243511 GAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTA--TTG 243568 || || ||||| | ||| | |||||| | ||||| ||| |||| ||| |||| | | Sbjct 338018 GACGCCGTTGACATCGAGAGAGAATTCGTCTGCGATGCTCTTCCTTGC--GCTTTGGTGG 338075 Query 243569 GCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCG 243628 | |||||| || || ||| | || |||||||||||||| || || || | || | Sbjct 338076 GAATGAACGGTGTTCTGATGAGCCAATACATCGAATTCGTCGCGGATCGGTTACTCGGAG 338135 Query 243629 CGCTTGGTTATGAGAAAG-TGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687 | || || |||| ||||| ||||| | | ||| || |||| | |||||| | ||| Sbjct 338136 CTCTGGGGTATG-GAAAGTTGTACGATGCGTCGAATCCTTTTGATTGGATGGAGTTGATT 338194 Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 || | || |||||||| || |||||||| || || ||| | || || || Sbjct 338195 TCTTTGCAGGGGAAAACAAATTTCTTCGAGAAACGGGTCGGAGAATACCA 338244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102848516911800