Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zostera_20marina_20[genbank_20GCA_5F001185155.1_202015-07-22] 2,228 sequences; 203,913,826 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq59 210 2e-49 seq1364 125 7e-24 seq486 107 2e-18 seq1915 89.7 5e-13 >seq59 Length=545433 Score = 210 bits (232), Expect = 2e-49 Identities = 592/897 (66%), Gaps = 18/897 (2%) Strand=Plus/Minus Query 132603 TTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAG 132662 ||| || ||||| || ||| |||||| || ||||| ||||| |||| ||| ||||| | Sbjct 338248 TTTCTGGTATTCTCCGACCCGTTTCTCGAAGAAATTTGTTTTCCCCTGCAAAGAAATCAA 338189 Query 132663 CGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGG--TGCCGATCAGGTCGACG 132720 | ||| |||| || || || | | | ||| ||| | || || || || Sbjct 338188 CTCCATCCAATCAAAAGGATTCGACGCATCGTACAACTTTCCATACCCCAGAGCTC--CG 338131 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780 || | || || || ||||| ||||||||||| ||| | | || | ||||| | Sbjct 338130 AGTAACCGATCCGCGACGAATTCGATGTATTGGCTCATCAGAACACCGTTCATTCCCACC 338071 Query 132781 AGA-CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGAC 132839 | | |||| || || || ||| || || | ||||||| | || ||||| | || Sbjct 338070 AAAGCGCAA-GGAAGAGCATCGCAGACGAATTCTCTCTCGATGTCAACGGCGTCCGATAC 338012 Query 132840 GATTTCCCTAACGCGCGCCGCGCTCGGC--CGTTGCACCAAATGCTTGAACATCAAGCAA 132897 ||| | | | | || ||||| || ||| || | | | | | ||| || Sbjct 338011 GATCCCACGGATCTTCTCCTCGCTCAGCTTCGTGTT--CAGAAGACCGTAAAGCAAACAG 337954 Query 132898 GCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCG 132957 || || || || || | || ||||| || || || | ||||||| ||| ||||| || Sbjct 337953 GCGAAATCACAGTGGAGACCTTCGTCTCTCGATATCAATTCGTTGGAGAAGGTCAATCCA 337894 Query 132958 GGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACG 133017 ||||| || || |||||||| | ||| ||||| || |||||| || || || || | Sbjct 337893 GGCATCAGACCACGTTTTTTTAACCAGAATATCGCACAGAAACTTCCAGAGAAAAATATC 337834 Query 133018 CCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATC 133077 || || ||| || || ||||| | | ||| |||| | | | | | ||||| Sbjct 337833 CCTTCCACGCAAGCAAAGGCCACGATCCTCTCAGCGAAAGACTCCGCA---CCGTCGATC 337777 Query 133078 CAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAAC 133137 || |||| |||||| || ||||| | ||| || || || || || || | ||||| || Sbjct 337776 CATCGCATCGCCCAATCCGCCTTCTTTTTTACACAAGGAATAGTCTCCACGGCGTGAAAT 337717 Query 133138 AAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCC 133197 | ||| ||||||| | || | ||| || | ||| ||||| || Sbjct 337716 AGACGAGTTTTCTCTGCGGAATCTTTGATGTAACACTCCAGGAGAAGACTGTACATCTCG 337657 Query 133198 GAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAA-GCACCGCGCCTCGACCACCTG 133256 || || | |||||| || ||||| ||||| ||||| || |||| | || || ||||| Sbjct 337656 GAATGAATGTTCTCAATAGCGATCTGAAATCCGTAGAACGCAC-GTGCTTCTGAGACCTG 337598 Query 133257 CACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAA 133316 || |||| ||| || || ||||||| || |||||| || ||| || || || Sbjct 337597 GACCTCTTTCATGAATCGAACGGCCAGATTCTCAAGGACGATACCATCGGACGCCGCAAA 337538 Query 133317 AAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA-AG--CGCTCCCAGTC 133373 || || || ||||| | ||||||||||||||||||| | | | || | ||||| | Sbjct 337537 GAAAGCGAGAACGTGAGTAATGAAATGGCGCTCGTTGTTGGTGAGAGTATGTTCCCAATG 337478 Query 133374 GCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTT 133433 || || || | ||||| || ||||||||| | ||||| || |||||||||||||| || Sbjct 337477 ACGAGTATCTTGAGACAGATCTACCTCCTCGGCCGTCCAGAAAGACGCCTCGGCTTTCTT 337418 Query 133434 GTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTT 133490 |||||| ||| || |||| ||| | || ||||| || ||||| |||||| Sbjct 337417 GTACATTTCCCATATCTCCGGATAATTGATCGGAAACATGCAGAACCGATCGGGGTT 337361 Score = 206 bits (228), Expect = 3e-48 Identities = 592/897 (66%), Gaps = 39/897 (4%) Strand=Plus/Plus Query 132603 TTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAG 132662 |||||| ||||| || ||| |||||| || ||||| || || |||| ||| ||||| | Sbjct 358857 TTTTTGGTATTCTCCGACCCGTTTCTCGAAGAAATTGGTCTTCCCCTGCAAAGAAATCAA 358916 Query 132663 CGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCG-ATC--AGGTCGAC 132719 | ||| |||| || || || | | | ||| ||| ||| ||| | || | Sbjct 358917 CTCCATCCAATCAAAAGGATTCGACGCATCGTACAACTTC---CCGTATCCTAAAGCGCC 358973 Query 132720 GAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAG 132779 ||| | || || || ||||||||||||||||| ||| | | || | ||||| Sbjct 358974 GAGTAACCGATCCGCAACGAACTCGATGTATTGGCTCATCAGAACACCGTTCATTCCCAC 359033 Query 132780 CAGA-CGCACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTG 132837 ||| |||| || ||||| ||| || ||| | | ||||||| | || |||| | Sbjct 359034 CAGGGCGCAG-GGAAGCGCATCGCAGACGAATTCCCT-CTCGATGTCCACGGCGTTCGAC 359091 Query 132838 ACGATTTCCCTAACGCGCGCCGCGCTCGGC--CGTTGCACCAAATGCTTGAACATCAAGC 132895 ||||| | | | | || ||||| || ||| || | | | | | ||| | Sbjct 359092 ACGATCCCACGGATCTTCTCCTCGCTCAGCTTCGTGTT--CAGAAGACCGTAAAGCAAAC 359149 Query 132896 AAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGC 132955 | || |||||||| || | ||| ||||| || || || | ||||||| ||| |||| | Sbjct 359150 AGGCGAAGTCGCAGTGGAGGCCTTCGTCTCTCGATATCAATTCGTTGGAGAAGGTCAGTC 359209 Query 132956 CGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGA 133015 | ||||| || |||||||| || ||||| ||||| || ||| || || || || || | Sbjct 359210 CAGGCATCAGACCGCGTTTCTTCAGCCAGAATATCGCACAGAAGCTTCCAGAGAAAAATA 359269 Query 133016 CGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGA 133075 || || ||| || |||||||| | | ||| | || | | | | ||| Sbjct 359270 TCCCTTCCACGCAAGCAAAAGCCACAATCCTCTCAGCAAAAGACTCCGCA---CCATCGA 359326 Query 133076 TCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCA 133135 |||| |||| |||||| || ||||||| || ||||| || || || || | ||||| | Sbjct 359327 TCCATCGCATCGCCCAATCCGCCTTTTTCTTCACGCAGGGAATAGTCTCCACGGCGTGGA 359386 Query 133136 ACAAACGGAGTTTCTCT--------TCCGAGG-AACGCACGTAGGTGTCGATGAGGGTCG 133186 | | ||| ||||||| | || | ||| | | | | || || || Sbjct 359387 AGAGACGAGTTTTCTCTGTGTTGTCTTTGATGTAACACTCCAA----TAGAAGACTGT-- 359440 Query 133187 AATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCT 133246 |||| || || || | |||||| || ||||| ||||| || || || || |||| Sbjct 359441 ---ACATCTCTGAATGGATGTTCTCGATAGCGATCTGAAATCCATAGAACGCGCGTGCCT 359497 Query 133247 CGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGC 133306 | ||||| || |||| ||| || || ||||||| ||| |||||||||||| Sbjct 359498 CCGAGACCTGGACCTCTTTCATGAATCGAACGGCCAGATTCTCGAGAACGATGCCGTCGG 359557 Query 133307 TGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA---AGC 133363 || || || || || || ||||| | ||||| || |||||||||||| | | | Sbjct 359558 ATGCCGCAAAGAAAGCGAGAACGTGAGTAATGAAGTGACGCTCGTTGTCGGTAAGGGTGT 359617 Query 133364 GCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCT 133423 | ||||||| ||||| || | |||||| || ||||| ||| | |||||||| ||||| | Sbjct 359618 GTTCCCAGTGACGCGTATCATGGGACAGATCAACCTCTTCGGCCGTCCAAAAGGACGCTT 359677 Query 133424 CGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAAT-CACAAAC 133479 | ||||| || ||||| ||| | || | ||| | || ||||| || || |||| Sbjct 359678 CAGCTTTCTTATACATCTCCCATAACTCTGGATACTTGATTGGAAACATGCAGAAAC 359734 >seq1364 Length=85398 Score = 125 bits (138), Expect = 7e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 38239 AAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGG 38298 |||| ||||| || || || || || || ||||| ||||| || || |||| || ||| Sbjct 46319 AAAAGATGCAGATCTTTGTGAAGACCCTTACGGGGAAAACGATTACTCTCGAGGTTGAGT 46378 Query 38299 CCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 || | |||| | | | | || | ||| |||| || || || || || || | | Sbjct 46379 CCTCGGACACGATCGACAATGTCAAGGCAAAGATCCAGGATAAGGAAGGCATCCCACCAG 46438 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||| || || | ||| || || || ||||| |||| ||||| ||| ||||| Sbjct 46439 ACCAGCAGCGTCTTATCTTCGCCGGGAAGCAACTGGAGGACGGACGCACTCTCGCCGACT 46498 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| ||| ||||||| ||| |||| || ||| |||| || || Sbjct 46499 ACAACATCCAAAAAGAATCGACGCTCCATCTGGTTCTCCGTCTGAGGGGAGG 46550 >seq486 Length=444201 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || |||||||| || || || || || |||||||| | || || ||| | | Sbjct 158753 ATGCAGATCTTCGTAAAGACTCTGACTGGTAAGACCATCACTTTAGAGGTGGAGTCATCG 158812 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || || | ||||| ||||||||||| ||||||| Sbjct 158813 GACACAATTGACAATGTGAAGGCGAAGATTCAAGACAAGGAGGGAATTCCTCCCGACCAG 158872 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | || || || ||| |||| || | || ||||| || |||||| Sbjct 158873 CAGAGGTTGATCTTTGCTGGGAAGCAGTTGGAGGATGGTCGGACCCTTGCAGATTACAAC 158932 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||| | || || ||| | || || ||||||||||| || Sbjct 158933 ATCCAAAAGGAATCCACACTTCATCTTGTTCTTCGTTTGAGAGGAGG 158979 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || |||||||| || || || ||||| || ||||| | || || ||| | | Sbjct 158981 ATGCAGATCTTCGTAAAGACTCTGACTGGCAAGACTATCACACTGGAGGTTGAGTCTTCG 159040 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| || |||| ||||| |||||||| || ||||||| Sbjct 159041 GACACAATTGATAATGTGAAAGCGAAGATCCAAGACAAGGAGGGAATCCCTCCCGACCAG 159100 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | || || || ||| |||| || | || ||||| || |||||| Sbjct 159101 CAGAGGTTGATCTTTGCCGGAAAGCAGTTGGAGGATGGTCGGACCCTTGCAGATTACAAC 159160 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||||| | || || |||||||| || ||| Sbjct 159161 ATCCAAAAGGAATCTACTCTTCATTTGGTCCTCCGT 159196 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| ||||| || || |||||||| | || || ||| | | Sbjct 158297 ATGCAGATCTTTGTGAAAACTCTCACCGGTAAGACCATCACTTTAGAGGTGGAGTCTTCG 158356 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| || |||| ||||| |||||||| || | ||||| Sbjct 158357 GACACAATTGATAATGTGAAAGCTAAGATCCAAGACAAGGAGGGAATCCCTCCTGACCAG 158416 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | || || || ||| |||| || | || || || || |||||| Sbjct 158417 CAGAGGTTGATCTTTGCCGGGAAGCAGTTGGAGGATGGTCGTACACTTGCAGATTACAAC 158476 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||| | || || ||| | || || ||||||||||| || Sbjct 158477 ATCCAAAAGGAATCTACTCTACATCTTGTTCTTCGTTTGAGAGGAGG 158523 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || |||||||| || || || || || |||||||| | || || ||| | | Sbjct 158525 ATGCAGATCTTCGTAAAGACTCTGACTGGTAAGACCATCACTTTAGAGGTGGAGTCATCG 158584 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || || | ||||| |||||||| || | ||||| Sbjct 158585 GACACAATTGACAATGTGAAGGCGAAGATTCAAGACAAGGAGGGAATCCCTCCTGACCAG 158644 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | |||| || || || ||| |||| || | || ||||| || || || Sbjct 158645 CAGAGGTTGATTTTTGCCGGGAAGCAGTTGGAGGATGGTCGTACCCTTGCTGATTATAAT 158704 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| |||||| | || || ||| | || || ||||||||||| || Sbjct 158705 ATCCAGAAGGAATCCACACTTCATCTTGTTCTTCGTTTGAGAGGAGG 158751 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| |||||||||||||| | || || ||| | | Sbjct 170490 ATGCAAATTTTCGTCAAGACACTCACCGGCAAAACCATCACTTTAGAGGTTGAGTCGTCT 170431 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | |||||| || || | ||||| || || || || | |||| Sbjct 170430 GACACCATCGACAATG--TAAAGACTAAGATACAGGACAAGGAAGGTATCCCACCAGACC 170373 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| | || | ||| ||||| || |||| || | || || | |||||||| Sbjct 170372 AGCAGCGTTTGATCTTCGCAGGCAAGCAATTGGAAGATGGTCGTACTTTGGCCGACTACA 170313 Query 38422 ACATCCAAAAGGAA 38435 |||||||||| ||| Sbjct 170312 ACATCCAAAAAGAA 170299 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || |||||||| |||||||||||||| | || || ||| | | Sbjct 170034 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAAACCATCACTTTAGAGGTTGAGTCGTCT 169975 Query 38304 GACAGCGT-GCAAACGCTTAAAGA-AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| |||||| || || | ||||| || || || || | |||| Sbjct 169974 GACACCATCGACAACG--TAAAGACTAAGATACAGGACAAGGAAGGTATCCCACCAGACC 169917 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || | || | || ||||| || |||| || | || || | |||||||| Sbjct 169916 AGCAACGTTTGATCTTTGCAGGCAAGCAATTGGAAGATGGTCGTACTTTGGCCGACTACA 169857 Query 38422 ACATCCAAAAGGAA 38435 |||||||||| ||| Sbjct 169856 ACATCCAAAAAGAA 169843 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || |||||||| |||||||||||||| | || || ||| | | Sbjct 173623 ATGCAGATTTTCGTCAAGACGCTCACCGGCAAAACCATCACGTTAGAGGTTGAGTCGTCT 173564 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| |||||| | || || || || || || | ||||| Sbjct 173563 GACACCATCGACAATGTTAAGACAAAAATTCAAGATAAGGAAGGTATCCCACCAGACCAG 173504 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | || || || ||| |||| || | ||||| | ||||||||| Sbjct 173503 CAGCGTTTGATCTTTGCAGGTAAGCAGTTGGAAGATGGTCGCACTTTGGCTGACTACAAC 173444 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || || || | || || || ||||| || ||| Sbjct 173443 ATTCAGAAAGAGTCCACTCTTCACTTGGTACTCCGT 173408 >seq1915 Length=652484 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| |||||||| || | ||||||||||| || || | || || || | | Sbjct 300472 AATGCAAATTTTCGTAAAGACATTGACGGGCAAAACAATTACTTTGGAAGTAGAAACTTC 300413 Query 38303 CGACAGCG-TGCAAACGCTTAAAGA-AAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 || | || ||| || |||||| || || | |||||||| || || || | ||| Sbjct 300412 AGATACCGTTGCGAA--TATAAAGAGTAAGATTCAAGACAAAGAAGGTATCCCTCCAGAC 300355 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||| | ||||| | || || ||||| || || || || ||| || || ||| Sbjct 300354 CAACAAAGACTCATCTTTGCAGGTAAACAACTTGAGGATGATTGCATTCTTGCTGATTAC 300295 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || || ||| |||| || ||| |||| || || ||||||| || Sbjct 300294 AACATTCAGAAAGAATCGACCCTCCATCTGGTACTCCGACTGAGAGGAGG 300245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500158870187520