Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zostera_20marina_20[genbank_20GCA_5F001185155.1_202015-07-22] 2,228 sequences; 203,913,826 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq704 141 1e-28 >seq704 Length=333105 Score = 141 bits (156), Expect = 1e-28 Identities = 254/365 (70%), Gaps = 6/365 (2%) Strand=Plus/Minus Query 9195 TCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCG 9254 |||||||| || || | || | |||| || || ||||| | ||||| || || || Sbjct 214058 TCAAAGCGTCCAGGCCTGAGTAAAGCGTTGTCTAGAATATCTGCACGATTTGTAGCAGCA 213999 Query 9255 ATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATA 9314 | |||| | ||||| | |||||||||||||||||||||| ||| || |||| | Sbjct 213998 ACCACAATGACCCCTGTGTTTCCCTCAAAACCATCCATCTCTGTCAGAAGCTGATTAAGA 213939 Query 9315 GTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACTGCGTTGCTTTCCCACGG 9372 |||||||| ||||||||||| || | | | | |||| | | |||| | || || | Sbjct 213938 GTTTGTTCTCGTTCATCATT-GC-CCCCTCCAATTCCAGTTCCTCTTTGCCTACCAACAG 213881 Query 9373 CATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGAT 9432 |||| |||||||||| || ||||| || || ||| || || | | ||| |||| Sbjct 213880 CATCTATCTCATCAACAAACACAATGCAAGGAGCATTCTCCTTTGCCTTCTTAAAAAGAT 213821 Query 9433 CGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATT 9492 | || |||| || || ||||||||||||||||| ||||| | | | ||| ||| Sbjct 213820 CACGGACCCGAGAAGCTCCAACACCAACAAACATCTCTACAAATTCAGATCCTGAA-ATT 213762 Query 9493 G-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTA 9551 | || || |||||| | |||||| ||||| ||| ||||| || || || || || Sbjct 213761 GAGAAAAAAGGGACACCTGCTTCACCGGCAATTGCTTTTGCGAGTAGTGTTTTCCCTGTT 213702 Query 9552 CCTGG 9556 || || Sbjct 213701 CCAGG 213697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589964369034720