Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zostera_20marina_20[genbank_20GCA_5F001185155.1_202015-07-22] 2,228 sequences; 203,913,826 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1364 104 2e-17 >seq1364 Length=85398 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | || || | |||| ||| | ||| || |||||||| || ||||||||| Sbjct 46550 CCTCCCCTCAGACGGAGAACCAGATGGAGCGTCGATTCTTTTTGGATGTTGTAGTCGGCG 46491 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| |||| || || || || |||||| | || |||||||| || || || || Sbjct 46490 AGAGTGCGTCCGTCCTCCAGTTGCTTCCCGGCGAAGATAAGACGCTGCTGGTCTGGTGGG 46431 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || ||||| |||||| || | | || | ||||| | || ||||| Sbjct 46430 ATGCCTTCCTTATCCTGGATCTTTGCCTTGACATTGTCGATCGTGTCCGAGGACTCAACC 46371 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || | ||| ||||| || || ||||||||||| ||||| Sbjct 46370 TCGAGAGTAATCGTTTTCCCCGTAAGGGTCTTCACAAAGATCTGCAT 46324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424922861437536