Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zostera_20marina_20[genbank_20GCA_5F001185155.1_202015-07-22] 2,228 sequences; 203,913,826 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq884 84.2 3e-11 >seq884 Length=234451 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/139 (74%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 171042 TATTCGTGTCGTGCTGGTGCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCTGTT 171101 || || ||||||||||| || || || || ||||| || ||| ||||| |||| |||| Sbjct 82075 TACTCTTGTCGTGCTGGAGCATGCTCTACTTGTGCAGGCAAACTTGAGTCTGGTACTGTC 82134 Query 171102 GATCAATCCGATCAATCTTTCCTTGATGATGATCAGATTGAATCA--GGTTTCATTCTGA 171159 || ||||| ||| ||| |||||||||||| |||||| || || || | | || | Sbjct 82135 GACCAATCTGATGGATCATTCCTTGATGATACTCAGAT--AAGCAATGGCTATGTCCTCA 82192 Query 171160 CCTGCGTCTCATATCCTAC 171178 | ||||| |||| ||||| Sbjct 82193 CTTGCGTTGCATACCCTAC 82211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622053075339360