Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zostera_20marina_20[genbank_20GCA_5F001185155.1_202015-07-22] 2,228 sequences; 203,913,826 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq486 185 2e-41 seq1364 178 3e-39 seq841 163 6e-35 seq2066 141 2e-28 seq1915 141 2e-28 seq59 100 6e-16 seq636 93.3 9e-14 >seq486 Length=444201 Score = 185 bits (204), Expect = 2e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| ||| | || ||| |||||||||||||| || ||| Sbjct 159207 CCACCACGAAGACGGAGGACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAATCTGCA 159148 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || |||||||| | || || |||||||||||||| | || ||||| || Sbjct 159147 AGGGTCCGACCATCCTCCAACTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCGGGAGGG 159088 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||||||||||||||| ||||| || |||| || |||||||||| || || Sbjct 159087 ATTCCCTCCTTGTCTTGGATCTTCGCTTTCACATTATCAATTGTGTCCGAAGACTCAACC 159028 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || |||| |||||| ||||| |||||||| Sbjct 159027 TCCAGTGTGATAGTCTTGCCAGTCAGAGTCTTTACGAAGATCTGCAT 158981 Score = 181 bits (200), Expect = 2e-40 Identities = 169/215 (79%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 ||||| || ||||||| || ||| |||||||||||||| || ||||| || || ||| Sbjct 158511 CGAAGAACAAGATGTAGAGTAGATTCCTTTTGGATGTTGTAATCTGCAAGTGTACGACCA 158452 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| | || ||||||||||||||||| | || |||||| || || ||||||||| Sbjct 158451 TCCTCCAACTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATTCCCTCCTTG 158392 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 ||||||||||| ||||| || |||| || |||||||||| || || || | |||||| Sbjct 158391 TCTTGGATCTTAGCTTTCACATTATCAATTGTGTCCGAAGACTCCACCTCTAAAGTGATG 158332 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||| || | ||| || || || |||||||| Sbjct 158331 GTCTTACCGGTGAGAGTTTTCACAAAGATCTGCAT 158297 Score = 172 bits (190), Expect = 1e-37 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 ||||| || ||||| | ||| ||| |||||||||||||| || ||||| || || ||| Sbjct 158967 CGAAGAACAAGATGAAGTGTGGATTCCTTTTGGATGTTGTAATCTGCAAGGGTCCGACCA 158908 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| | || ||||| ||||||||||| | || ||||| ||||| ||||||||| Sbjct 158907 TCCTCCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCGGGAGGAATTCCCTCCTTG 158848 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 ||||| ||||| || || || | || || |||||||| | || || || | |||||| Sbjct 158847 TCTTGAATCTTCGCCTTCACATTGTCAATTGTGTCCGATGACTCCACCTCTAAAGTGATG 158788 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||| |||| |||||| ||||| |||||||| Sbjct 158787 GTCTTACCAGTCAGAGTCTTTACGAAGATCTGCAT 158753 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 282871 AACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG 282930 |||| ||||| || || ||||| | || | || |||||| || |||||||| || | Sbjct 169122 AACCTCCACGGAGACGTAGTACTAAGTGAAGGGTAGATTCTTTCTGAATGTTGTAATCCG 169181 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || || ||||| || || || || || ||||||||||| | ||| || ||| | Sbjct 169182 CAAGGGTCCGCCCATCTTCAAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGATCAGGTG 169241 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | || ||||||||||||||||||||||| |||||| | || || || || || | || | Sbjct 169242 GGATTCCCTCCTTGTCTTGGATCTTTGCCTTTACGTTGTCAATGGTATCTGATGACTCAA 169301 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 | || || ||||| ||||| || |||||||||||||| ||||| |||||| Sbjct 169302 CCTCAAGTGTGATGGTCTTTCCTGTCAAAGTCTTAACAAATATTTGCATT 169351 Score = 163 bits (180), Expect = 6e-35 Identities = 165/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 ||||| || ||||| | ||| ||| || ||||| || || |||||||| || || ||| Sbjct 158739 CGAAGAACAAGATGAAGTGTGGATTCCTTCTGGATATTATAATCAGCAAGGGTACGACCA 158680 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| | || ||||||||||| ||||| | || |||||| || || ||||||||| Sbjct 158679 TCCTCCAACTGCTTCCCGGCAAAAATCAACCTCTGCTGGTCAGGAGGGATTCCCTCCTTG 158620 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 ||||| ||||| || || || | || || |||||||| | || || || | |||||| Sbjct 158619 TCTTGAATCTTCGCCTTCACATTGTCAATTGTGTCCGATGACTCCACCTCTAAAGTGATG 158560 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||| |||| |||||| ||||| |||||||| Sbjct 158559 GTCTTACCAGTCAGAGTCTTTACGAAGATCTGCAT 158525 Score = 159 bits (176), Expect = 7e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 282887 AAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATC 282946 ||| || || ||||| ||| ||||||||||||||||||||| || | || || ||||| Sbjct 169822 AAGCACAAGGTGTAAGGTGGATTCTTTTTGGATGTTGTAGTCGGCCAAAGTACGACCATC 169881 Query 282947 CTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTC 283006 || | ||| || || ||||||||||||||||| ||||| || ||||| |||||||| Sbjct 169882 TTCCAATTGCTTGCCTGCAAAGATCAAACGTTGCTGGTCTGGTGGGATACCTTCCTTGTC 169941 Query 283007 TTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGT 283066 || ||||| | |||||| | ||||| ||||| || | || || || | |||||| || Sbjct 169942 CTGTATCTTAGTCTTTACGTTGTCGATGGTGTCAGACGACTCAACCTCTAAAGTGATGGT 170001 Query 283067 CTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || | ||||| ||||| |||||||| Sbjct 170002 TTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 170034 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 282887 AAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATC 282946 ||| || ||||||| ||| ||||| || ||||| ||||| || | || |||||||| Sbjct 170050 AAGCACAAGATGTAGTGTGGACTCTTTCTGAATGTTATAGTCGGCCAAAGTCCGGCCATC 170109 Query 282947 CTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTC 283006 |||| ||| || || ||||||||||| ||||||||||| || ||||| ||||| || Sbjct 170110 TTCTAATTGCTTGCCTGCAAAGATCAAGCGTTGTTGGTCTGGTGGGATACCTTCCTTATC 170169 Query 283007 TTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGT 283066 ||| || ||||| || || |||| || ||||| || | || || || | |||||| || Sbjct 170170 TTGAATTTTTGCCTTAACATTATCAATGGTGTCAGACGACTCAACCTCTAAAGTGATGGT 170229 Query 283067 CTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || | ||||| ||||| |||||||| Sbjct 170230 TTTTCCAGTGAGGGTCTTGACGAAAATCTGCAT 170262 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 282887 AAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATC 282946 ||| || || ||||| ||| ||||||||||||||||||||| || | || || ||||| Sbjct 170278 AAGCACAAGGTGTAAGGTGGATTCTTTTTGGATGTTGTAGTCGGCCAAAGTACGACCATC 170337 Query 282947 CTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTC 283006 || | ||| || || || ||||||||||| || ||||| || ||||| |||||||| Sbjct 170338 TTCCAATTGCTTGCCTGCGAAGATCAAACGCTGCTGGTCTGGTGGGATACCTTCCTTGTC 170397 Query 283007 TTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGT 283066 || ||||| | ||||| | ||||| ||||| || | || || || | |||||| || Sbjct 170398 CTGTATCTTAGTCTTTACATTGTCGATGGTGTCAGACGACTCAACCTCTAAAGTGATGGT 170457 Query 283067 CTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || | ||||| ||||| || ||||| Sbjct 170458 TTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 170490 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || ||||||| || | ||| ||||| || |||||||||||||| Sbjct 173396 ACCACCACGGAGACGGAGTACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGC 173455 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | ||||| ||||| || | || || || |||||||||||||| || ||||| || Sbjct 173456 CAAAGTGCGACCATCTTCCAACTGCTTACCTGCAAAGATCAAACGCTGCTGGTCTGGTGG 173515 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| ||||| ||||| || |||| || || | ||||| ||||| || | || || Sbjct 173516 GATACCTTCCTTATCTTGAATTTTTGTCTTAACATTGTCGATGGTGTCAGACGACTCAAC 173575 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| || || || || | ||||| ||||| |||||||| Sbjct 173576 CTCTAACGTGATGGTTTTGCCGGTGAGCGTCTTGACGAAAATCTGCAT 173623 Score = 140 bits (154), Expect = 7e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | || || || || || |||| ||| ||||| || ||||||||||| || Sbjct 169352 CCACCTCTCAAACGGAGCACAAGGTGTAGGGTGGACTCTTTCTGAATGTTGTAGTCGGCC 169411 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | || || ||||| || | ||| || || ||||||||||| ||||| ||||| || Sbjct 169412 AAAGTACGACCATCTTCCAATTGCTTTCCAGCAAAGATCAAGCGTTGCTGGTCTGGTGGG 169471 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||| | ||||| ||||| |||||||| ||||| | ||||| ||||| || | || ||| Sbjct 169472 ATAGCTTCCTTATCTTGAATCTTTGCCTTTACATTGTCGATGGTGTCAGACGACTCAACT 169531 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | |||||| || || || || | ||||| ||||| || ||||| Sbjct 169532 TCTAAAGTGATGGTTTTGCCGGTGAGCGTCTTGACGAAAATTTGCAT 169578 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 282887 AAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATC 282946 |||||| || |||| ||| |||||||| || |||||||| || | ||||| ||||| Sbjct 169594 AAGTACAAGGTGTAGGGTGGACTCTTTTTGAATATTGTAGTCGGCCAAAGTGCGACCATC 169653 Query 282947 CTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTC 283006 || | ||||| || ||||||||||| ||||| ||||| || || || ||||| || Sbjct 169654 TTCCAACTGTTTGCCAGCAAAGATCAAGCGTTGCTGGTCTGGTGGGATGCCTTCCTTATC 169713 Query 283007 TTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGT 283066 |||||| || || || || | ||||| ||||| || || || || | |||||| || Sbjct 169714 TTGGATTTTCGCCTTAACATTGTCGATGGTGTCAGACAACTCAACCTCTAAAGTGATGGT 169773 Query 283067 CTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || | ||||| ||||| |||||||| Sbjct 169774 TTTTCCGGTGAGTGTCTTGACGAAAATCTGCAT 169806 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 || ||||| || || |||| |||| ||||| || |||||||| || || | || || Sbjct 173634 AGTCGAAGCACAAGGTGTAGCGTGGACTCTTTCTGAATGTTGTAATCGGCCAAAGTACGA 173693 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 ||||| |||| || || || |||||||||||||| || ||||| || ||||| ||| Sbjct 173694 CCATCTTCTAACTGCTTGCCTGCAAAGATCAAACGCTGCTGGTCTGGTGGGATACCTTCC 173753 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061 || ||||| || ||||| || || | ||||| ||||| || | || || || | ||| Sbjct 173754 TTATCTTGAATTTTTGCCTTAACATTGTCGATGGTGTCAGACGACTCAACCTCTAACGTG 173813 Query 283062 ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || || | ||||| ||||| |||||||| Sbjct 173814 ATTGTTTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 173851 Score = 127 bits (140), Expect = 4e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 282887 AAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATC 282946 ||| || ||||||| ||| |||||||| ||||||||||| || | || || ||||| Sbjct 170506 AAGCACAAGATGTAGGGTGGACTCTTTTTGAATGTTGTAGTCGGCCAATGTACGACCATC 170565 Query 282947 CTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTC 283006 |||| || || || ||||| ||||| ||||| ||||| ||| ||||| || ||||| Sbjct 170566 TTCTAACTGCTTGCCTGCAAATATCAATCGTTGCTGGTCTGGCGGGATACCTTCTTTGTC 170625 Query 283007 TTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGT 283066 || || || | ||| || ||||||| || || |||| ||| || || | || || || Sbjct 170626 CTGAATTTTAGTTTTAACATTATCGATTGTATCAGAAGATTCTACCTCTAATGTTATGGT 170685 Query 283067 CTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| ||||| | || || || || || ||||| Sbjct 170686 CTTTCCCGTTAGTGTTTTTACAAAGATTTGCAT 170718 >seq1364 Length=85398 Score = 178 bits (196), Expect = 3e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || | ||| || || |||||||| | ||| ||||||||||||||||||||| || Sbjct 46551 ACCTCCCCTCAGACGGAGAACCAGATGGAGCGTCGATTCTTTTTGGATGTTGTAGTCGGC 46492 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| ||||| |||||||| ||||| | ||| || ||||| || Sbjct 46491 GAGAGTGCGTCCGTCCTCCAGTTGCTTCCCGGCGAAGATAAGACGCTGCTGGTCTGGTGG 46432 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||| || ||||||||||| || || | ||||| |||||||| | || || Sbjct 46431 GATGCCTTCCTTATCCTGGATCTTTGCCTTGACATTGTCGATCGTGTCCGAGGACTCAAC 46372 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 |||||||| ||||| || ||||| | ||||| || || |||||||| || Sbjct 46371 CTCGAGAGTAATCGTTTTCCCCGTAAGGGTCTTCACAAAGATCTGCATCTT 46321 >seq841 Length=1035533 Score = 163 bits (180), Expect = 6e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || || || ||||| || | || || || || || || ||||||||| Sbjct 649929 CCTCCCCGTAGACGGAGAACCAGGTGAAGAGTTGACTCCTTCTGAATATTATAGTCAGCA 649988 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || |||||||| || || |||||||| ||||||||||| || ||||| || Sbjct 649989 AGTGTACGTCCATCCTCAAGCTGCTTCCCGGCGAAGATCAAACGCTGCTGGTCTGGTGGG 650048 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || || ||||| || ||||| || || ||| ||||||| || ||||||| |||||| Sbjct 650049 ATTCCTTCTTTGTCCTGAATCTTGGCCTTCACGTTATCGATCGTATCCGAAGATTCGACC 650108 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| ||||||||||| ||||| | || || || || |||||||| || Sbjct 650109 TCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATGTT 650158 >seq2066 Length=1341 Score = 141 bits (156), Expect = 2e-28 Identities = 325/481 (68%), Gaps = 20/481 (4%) Strand=Plus/Plus Query 301432 GACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGTTC 301491 || || ||||| || |||||||| || || ||| || |||||| || || ||||| Sbjct 241 GATCCTTATATTAATGTCGATCCAGGCACTATGTCACCATTTCAACACGGTGAGGTGTTT 300 Query 301492 GTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCACTTCA 301551 || || ||||||||||||||||||||||| || | || ||||| ||||| || | || Sbjct 301 GTCACCGATGATGGTGCTGAAACCGATCTTGACTTAGGCCACTATGAACGGTTTA-TTAG 359 Query 301552 TTAACCCTT----AAGCGTGAAAGTAATTTTACGACTGGCCAAGTTTATTTAAAAGTTAT 301607 ||| | | |||||| | ||||| || || || ||| ||||| || || || Sbjct 360 CCAACGCATGGCCAAGCGT---AACAATTTCACCACAGGTCAAATTTATGAAACTGTGAT 416 Query 301608 CGAAAATGAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTGTTCCCCACATCAC 301667 |||| ||||| ||| || || || || || |||||||| |||| || || || Sbjct 417 TAAAAAAGAACGTCGTGGTGAGTACCTTGGTAAAACAGTGCAAGTCATTCCGCATATTAC 476 Query 301668 CGATGAAATCAAAAGAAGAATTCACATTGCG--GCTGAAAAATCAGATATACTTATTGGA 301725 ||||||||| ||| || | | ||| || | | || ||| | |||| Sbjct 477 CGATGAAATTAAA--GCCCATGTAAAACGCGGCGCAGCAGGCTCTGATGTTGCGATTGTT 534 Query 301726 GAAATTGGAGGAACGGTCGGAGATATCGAATCGCTTCCTTTTATAGAAGCGATTCGTCAA 301785 ||| |||| || ||||| || || |||||||| | |||||| ||||||| ||| | || Sbjct 535 GAAGTTGGTGGTACGGTGGGTGACATCGAATCATTACCTTTTTTAGAAGCAATTAGACAG 594 Query 301786 CTCTCTCATGACGAAGG-AACGGCCA---ATGTTCTGTTCATTCATCTCGTGCTCTTACC 301841 | | ||| ||||| || ||| | || | ||| |||| | | | | || || Sbjct 595 ATGGGTTTTGAAGAAGGTAAAGGCAACACTTGCTTTGTACATT--TGACAT--TATTGCC 650 Query 301842 CTATATAGCGACTGCTGGTGAGTTGAAATCAAAGCCAGCACAGCATTCGGTTAAAGAATT 301901 | || | ||||| |||||| | ||| |||| ||| |||| ||||| || ||||| || Sbjct 651 ATGGATTCCAACTGCAGGTGAGCTTAAAACAAAACCAACACAACATTCAGTGAAAGAGTT 710 Query 301902 G 301902 | Sbjct 711 G 711 >seq1915 Length=652484 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || | ||| || ||||||||||| | || |||||| || |||||||| |||||| Sbjct 300245 CCTCCTCTCAGTCGGAGTACCAGATGGAGGGTCGATTCTTTCTGAATGTTGTAATCAGCA 300304 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||| ||||||| |||||||| || |||||||| | | ||||||||| || Sbjct 300305 AGAATGCAATCATCCTCAAGTTGTTTACCTGCAAAGATGAGTCTTTGTTGGTCTGGAGGG 300364 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| || |||||||| ||||| |||| | | | || || |||| ||| ||| Sbjct 300365 ATACCTTCTTTGTCTTGAATCTTACTCTTTATATTCGCAACGGTATCTGAAGTTTCTACT 300424 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || | ||| || || || |||||||| ||||| ||||| || |||||| Sbjct 300425 TCCAAAGTAATTGTTTTGCCCGTCAATGTCTTTACGAAAATTTGCATT 300472 Score = 127 bits (140), Expect = 4e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 |||||||||||||| | || |||||| || || ||||| |||| ||| | | || Sbjct 299573 CGAAGTACCAGATGGAGAGTCGATTCTTTCTGAATATTGTAATCAGAAAGAATATGATCA 299632 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| ||||| || || |||||||| | | ||| |||||| || || || || ||| Sbjct 299633 TCCTCAAGTTGCTTACCTGCAAAGATGAGTCTTTGCTGGTCAGGGGGGATGCCTTCTTTG 299692 Query 283005 TCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGAT 283063 ||||| || ||| || ||||| | | | || || |||| ||| ||||| | ||| || Sbjct 299693 TCTTGAAT-TTTACTCTTTACATTCGCAACCGTATCTGAAGTTTCTACTTCCAAAGTAAT 299751 Query 283064 CGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||||| |||||||| ||||| ||||| || |||||| Sbjct 299752 TGTCTTGCCCGTCAACGTCTTTACGAAAATTTGCATT 299788 Score = 127 bits (140), Expect = 4e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 || ||||||||||| | || |||||| || |||||||| |||||||| ||| || Sbjct 300485 CGGAGTACCAGATGGATAGTCGATTCTTTCTGAATGTTGTAATCAGCAAGAATGCAATCA 300544 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| ||||| || || |||||||||| | ||||||||| || || || || ||| Sbjct 300545 TCCTCAAGTTGCTTACCTGCAAAGATCAGTCTTTGTTGGTCTGGAGGGATGCCTTCTTTG 300604 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 ||||| ||||| ||||| | | | || || |||| || ||||| | ||| || Sbjct 300605 TCTTGAATCTTACTCTTTACATTCGCAACGGTATCTGAAGTTTTTACTTCCAAAGTAATT 300664 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || | ||||| ||||| |||||||| ||||| Sbjct 300665 GTTTTGTCTGTCAATGTCTTTACGAATATTTGCAT 300699 Score = 91.5 bits (100), Expect = 3e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 282921 TTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGT 282980 ||||| |||||||| |||| || |||||||||||| || ||||| | | | || Sbjct 299381 TTGTAATCAGCAAGAATGCGACCGCACTCTAGTTGTTTACCAGCAAAAACGATTCTCTGC 299440 Query 282981 TGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCC 283040 | | |||||||| || |||| || ||||| |||||||| || || | ||| || Sbjct 299441 TTGATTGGAGGAATACCTTCTTTGTTTTCTATCTTAGCTTTTACAGTGTCAACAGTATCA 299500 Query 283041 GAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||| ||| || | | ||| |||||| | ||||| || ||||| || || || |||||| Sbjct 299501 GAAATTTCTACATTCAAAGTAATCGTCCTTCCCGTTAATGTCTTTACAAAAATTTGCATT 299560 >seq59 Length=545433 Score = 100 bits (110), Expect = 6e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 230193 GAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGG 230252 || ||| | ||||| ||| |||||||| | | | || ||||| | || ||| ||| | Sbjct 338039 GAATTCGTCTGCGATGCTCTTCCTTGCGCTTTGGTGGGAATGAACGGTGTTCTGATGAGC 338098 Query 230253 CAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAG-TGTA 230311 ||||| ||||||||||| || ||||| | ||| || || ||||| | ||||| |||| Sbjct 338099 CAATACATCGAATTCGTCGCGGATCGGTTACTCGGAGCTCTGGGGTATG-GAAAGTTGTA 338157 Query 230312 TAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTT 230371 | | ||| || || | || |||||| | ||||| | ||||||||||| || || Sbjct 338158 CGATGCGTCGAATCCTTTTGATTGGATGGAGTTGATTTCTTTGCAGGGGAAAACAAATTT 338217 Query 230372 CTTCGAAAAGCGTGTCAGCGATTATCA 230398 |||||| || || ||| | || || || Sbjct 338218 CTTCGAGAAACGGGTCGGAGAATACCA 338244 >seq636 Length=371348 Score = 93.3 bits (102), Expect = 9e-14 Identities = 88/110 (80%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 282994 TACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTT-CGACT 283052 |||| ||||||||||||||||| || || || | ||||| || || | |||| ||||| Sbjct 143383 TACCTTCCTTGTCTTGGATCTTCGCCTTAACATTGTCGATCGTATC-GCTGCTTTCGACT 143325 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 |||||||| || ||||| || |||| |||||| || || |||||||| || Sbjct 143324 TCGAGAGTAATGGTCTTCCCAGTCAGAGTCTTCACAAAAATCTGCATCTT 143275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046709319521112