Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zostera_20marina_20[genbank_20GCA_5F001185155.1_202015-07-22] 2,228 sequences; 203,913,826 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1364 172 1e-37 seq841 167 6e-36 seq486 152 1e-31 seq1915 134 3e-26 seq1253 98.7 2e-15 seq636 93.3 1e-13 seq72 93.3 1e-13 >seq1364 Length=85398 Score = 172 bits (190), Expect = 1e-37 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 177916 AAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAA 177975 ||| | | || || || ||||| || || || || |||||||| || |||||||| || Sbjct 46319 AAAAGATGCAGATCTTTGTGAAGACCCTTACGGGGAAAACGATTACTCTCGAGGTTGAGT 46378 Query 177976 GCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGG 178035 ||| ||||| ||||| || ||||| |||||| ||||| || ||||| ||||| || | Sbjct 46379 CCTCGGACACGATCGACAATGTCAAGGCAAAGATCCAGGATAAGGAAGGCATCCCACCAG 46438 Query 178036 ACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATT 178095 ||||||| || |||||||||||||| || || || || || ||| | ||||| ||||| | Sbjct 46439 ACCAGCAGCGTCTTATCTTCGCCGGGAAGCAACTGGAGGACGGACGCACTCTCGCCGACT 46498 Query 178096 ATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130 | ||| ||||||||||||| || || ||||| ||| Sbjct 46499 ACAACATCCAAAAAGAATCGACGCTCCATCTGGTT 46533 >seq841 Length=1035533 Score = 167 bits (184), Expect = 6e-36 Identities = 161/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || |||||||| || || || || ||||||||||||||||| ||| || || Sbjct 650152 CAGATCTTTGTGAAAACCCTAACGGGGAAGACGATCACCCTCGAGGTCGAATCTTCGGAT 650093 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || |||||||||||||||||||||||||| || |||||||| Sbjct 650092 ACGATCGATAACGTGAAGGCCAAGATTCAGGACAAAGAAGGAATCCCACCAGACCAGCAG 650033 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| || ||||| || |||||| | || ||||| || ||||| | Sbjct 650032 CGTTTGATCTTCGCCGGGAAGCAGCTTGAGGATGGACGTACACTTGCTGACTATAATATT 649973 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || ||||| || || || ||| Sbjct 649972 CAGAAGGAGTCAACTCTTCACCTGGTT 649946 >seq486 Length=444201 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || ||||| ||||| | ||||| || || ||| Sbjct 170031 CAGATTTTCGTCAAGACGCTCACTGGCAAAACCATCACTTTAGAGGTTGAGTCGTCTGAC 169972 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| |||||||| ||||| ||||| || ||||||||| Sbjct 169971 ACCATCGACAACGTAAAGACTAAGATACAGGACAAGGAAGGTATCCCACCAGACCAGCAA 169912 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || || | |||||||| | ||| | ||||| || ||| || Sbjct 169911 CGTTTGATCTTTGCAGGCAAGCAATTGGAAGATGGTCGTACTTTGGCCGACTACAACATC 169852 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||||| || | || ||||| | || |||||| Sbjct 169851 CAAAAAGAATCCACCTTACACCTTGTGCTTAGGCTCAGA 169813 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || ||||| || ||||| ||||| | ||||| || || ||| Sbjct 170487 CAAATTTTCGTCAAGACACTCACCGGCAAAACCATCACTTTAGAGGTTGAGTCGTCTGAC 170428 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||| |||||||| ||||| ||||| || |||||||| Sbjct 170427 ACCATCGACAATGTAAAGACTAAGATACAGGACAAGGAAGGTATCCCACCAGACCAGCAG 170368 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || || | |||||||| | ||| | ||||| || ||| || Sbjct 170367 CGTTTGATCTTCGCAGGCAAGCAATTGGAAGATGGTCGTACTTTGGCCGACTACAACATC 170308 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||||| || | || ||||| | || |||||| Sbjct 170307 CAAAAAGAATCCACCTTACACCTTGTGCTTAGGCTCAGA 170269 Score = 149 bits (164), Expect = 2e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || |||||||||||||| || || || ||||| | |||||||| || ||| Sbjct 158300 CAGATCTTTGTGAAAACTCTCACCGGTAAGACCATCACTTTAGAGGTGGAGTCTTCGGAC 158359 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| ||||| || ||||| || ||||||||||| |||||||| Sbjct 158360 ACAATTGATAATGTGAAAGCTAAGATCCAAGACAAGGAGGGAATCCCTCCTGACCAGCAG 158419 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| ||||| || ||| | || ||||| | || ||||| ||||| ||| || Sbjct 158420 AGGTTGATCTTTGCCGGGAAGCAGTTGGAGGATGGTCGTACACTTGCAGATTACAACATC 158479 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 ||||| ||||| || || ||||||||| Sbjct 158480 CAAAAGGAATCTACTCTACATCTTGTT 158506 Score = 138 bits (152), Expect = 3e-27 Identities = 151/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || ||||| || ||||| || || ||| Sbjct 158984 CAGATCTTCGTAAAGACTCTGACTGGCAAGACTATCACACTGGAGGTTGAGTCTTCGGAC 159043 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| ||||| || ||||| || ||||||||||| |||||||| Sbjct 159044 ACAATTGATAATGTGAAAGCGAAGATCCAAGACAAGGAGGGAATCCCTCCCGACCAGCAG 159103 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| |||||||| ||| | || ||||| |||| ||||| ||||| ||| || Sbjct 159104 AGGTTGATCTTTGCCGGAAAGCAGTTGGAGGATGGTCGGACCCTTGCAGATTACAACATC 159163 Query 178104 CAAAAAGAATCAACACTGCAT 178124 ||||| ||||| || || ||| Sbjct 159164 CAAAAGGAATCTACTCTTCAT 159184 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || ||||| || || ||||| || || || | ||||| ||| || || Sbjct 170715 CAAATCTTTGTAAAAACACTAACGGGAAAGACCATAACATTAGAGGTAGAATCTTCTGAT 170656 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| || ||||||||||||||||| ||||| || ||||||||| Sbjct 170655 ACAATCGATAATGTTAAAACTAAAATTCAGGACAAAGAAGGTATCCCGCCAGACCAGCAA 170596 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || || || || || ||| | |||||||| | || | ||||| || ||| | Sbjct 170595 CGATTGATATTTGCAGGCAAGCAGTTAGAAGATGGTCGTACATTGGCCGACTACAACATT 170536 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||||| || || || |||||||| | || || ||| Sbjct 170535 CAAAAAGAGTCCACCCTACATCTTGTGCTTAGGCTAAGA 170497 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || ||||| ||||| | ||||| || || ||| Sbjct 173848 CAGATTTTCGTCAAGACGCTCACTGGCAAAACAATCACGTTAGAGGTTGAGTCGTCTGAC 173789 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||| ||||| || || ||||| ||||| || |||||||| Sbjct 173788 ACCATCGACAATGTTAAGGCAAAAATTCAAGATAAGGAAGGTATCCCACCAGACCAGCAG 173729 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || ||| | |||||||| | ||| | |||||||| ||| | Sbjct 173728 CGTTTGATCTTTGCAGGCAAGCAGTTAGAAGATGGTCGTACTTTGGCCGATTACAACATT 173669 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || ||||| || || || || ||||| | |||||||| Sbjct 173668 CAGAAAGAGTCCACGCTACACCTTGTGCTTCGACTCAGA 173630 Score = 134 bits (148), Expect = 3e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || ||||| | |||||||| || ||| Sbjct 158528 CAGATCTTCGTAAAGACTCTGACTGGTAAGACCATCACTTTAGAGGTGGAGTCATCGGAC 158587 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||||| ||||| || ||||||||||| |||||||| Sbjct 158588 ACAATTGACAATGTGAAGGCGAAGATTCAAGACAAGGAGGGAATCCCTCCTGACCAGCAG 158647 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || ||||| || ||| | || ||||| | || ||||| |||||||| || Sbjct 158648 AGGTTGATTTTTGCCGGGAAGCAGTTGGAGGATGGTCGTACCCTTGCTGATTATAATATC 158707 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| ||||| ||||||||| Sbjct 158708 CAGAAGGAATCCACACTTCATCTTGTT 158734 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| |||||||| ||||| | ||||| || || ||| Sbjct 169803 CAGATTTTCGTCAAGACACTCACCGGAAAAACCATCACTTTAGAGGTTGAGTTGTCTGAC 169744 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || || || || || || ||||| ||||| || ||||||||| Sbjct 169743 ACCATCGACAATGTTAAGGCGAAAATCCAAGATAAGGAAGGCATCCCACCAGACCAGCAA 169684 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || |||||| | |||||||| | ||| | ||||| || || | Sbjct 169683 CGCTTGATCTTTGCTGGCAAACAGTTGGAAGATGGTCGCACTTTGGCCGACTACAATATT 169624 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||||| || || || || ||||| | || || ||| Sbjct 169623 CAAAAAGAGTCCACCCTACACCTTGTACTTAGGCTTAGA 169585 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || ||||| || ||||| ||||| | || || || || ||| Sbjct 169575 CAAATTTTCGTCAAGACGCTCACCGGCAAAACCATCACTTTAGAAGTTGAGTCGTCTGAC 169516 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||||||| || || |||| ||||| || ||||||||| Sbjct 169515 ACCATCGACAATGTAAAGGCAAAGATTCAAGATAAGGAAGCTATCCCACCAGACCAGCAA 169456 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || ||||| || | |||||||| | ||| | ||||| || ||| | Sbjct 169455 CGCTTGATCTTTGCTGGAAAGCAATTGGAAGATGGTCGTACTTTGGCCGACTACAACATT 169396 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || ||||| || || || || ||||| Sbjct 169395 CAGAAAGAGTCCACCCTACACCTTGT 169370 Score = 122 bits (134), Expect = 2e-22 Identities = 153/206 (74%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || ||||| ||||| | ||||| || || ||| Sbjct 173620 CAGATTTTCGTCAAGACGCTCACCGGCAAAACCATCACGTTAGAGGTTGAGTCGTCTGAC 173561 Query 177984 ACCATCGAGAACGTCAA-ACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 |||||||| || || || |||||| ||||| || || ||||| ||||| || |||||||| Sbjct 173560 ACCATCGACAATGTTAAGACAAAA-ATTCAAGATAAGGAAGGTATCCCACCAGACCAGCA 173502 Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102 || | ||||| || || || ||| | |||||||| | ||| | || || || ||| | Sbjct 173501 GCGTTTGATCTTTGCAGGTAAGCAGTTGGAAGATGGTCGCACTTTGGCTGACTACAACAT 173442 Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128 || ||||| || || || || |||| Sbjct 173441 TCAGAAAGAGTCCACTCTTCA-CTTG 173417 >seq1915 Length=652484 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | || || ||||| || || | || || |||| ||||| Sbjct 300468 CAAATTTTCGTAAAGACATTGACGGGCAAAACAATTACTTTGGAAGTAGAAACTTCAGAT 300409 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||| | | ||| | || |||||||| ||||||||||| |||||||| ||||| ||| Sbjct 300408 ACCGTTGCGAATATAAAGAGTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAA 300349 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || ||||| || || |||| | | |||||| ||||| ||| | Sbjct 300348 AGACTCATCTTTGCAGGTAAACAACTTGAGGATGATTGCATTCTTGCTGATTACAACATT 300289 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || |||||||| || || ||||| || | |||| ||| Sbjct 300288 CAGAAAGAATCGACCCTCCATCTGGTACTCCGACTGAGA 300250 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | || || || || || || | || ||||||| ||||| Sbjct 300240 CAAATTTTCGTAAAGACGTTGACGGGCAAGACAATGACATTAGAAGTGGAAACTTCAGAT 300181 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||| | | ||| | || ||||||| ||||||||||| |||||||| ||||| ||| Sbjct 300180 ACCGTTGCGAATATAAAGAGTAAGATTCTAGACAAAGAAGGTATCCCTCCAGACCAACAA 300121 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || ||||| || || |||| | | |||||| ||||| ||| | Sbjct 300120 AGACTCATCTTTGCAGGTAAACAACTTGAGGATGATCGCATTCTTGCTGATTACAACATT 300061 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || |||||||| || || ||||| || Sbjct 300060 CAGAAAGAATCGACCCTCCATCTGGT 300035 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | |||| ||||| || || | || || ||| ||||| Sbjct 300696 CAAATATTCGTAAAGACATTGACAGACAAAACAATTACTTTGGAAGTAAAAACTTCAGAT 300637 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||| | | ||| || || |||||||| ||||||||||| |||||||| ||||| ||| Sbjct 300636 ACCGTTGCGAATGTAAAGAGTAAGATTCAAGACAAAGAAGGCATCCCTCCAGACCAACAA 300577 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || || || || || |||| | | |||||| ||||| ||| | Sbjct 300576 AGACTGATCTTTGCAGGTAAGCAACTTGAGGATGATTGCATTCTTGCTGATTACAACATT 300517 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || |||||||| || | ||||| || Sbjct 300516 CAGAAAGAATCGACTATCCATCTGGT 300491 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | || || || || || || | || || |||| ||||| Sbjct 299784 CAAATTTTCGTAAAGACGTTGACGGGCAAGACAATTACTTTGGAAGTAGAAACTTCAGAT 299725 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || | | ||| || || || ||||| ||||||||||| ||||| || ||||||||| Sbjct 299724 ACGGTTGCGAATGTAAAGAGTAAAATTCAAGACAAAGAAGGCATCCCCCCTGACCAGCAA 299665 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || || || || || |||| | |||| | ||||| || | Sbjct 299664 AGACTCATCTTTGCAGGTAAGCAACTTGAGGATGATCATATTCTTTCTGATTACAATATT 299605 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || |||||||| || || ||||| || Sbjct 299604 CAGAAAGAATCGACTCTCCATCTGGT 299579 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | || || || || || || | || || |||| ||||| Sbjct 300012 CAAATTTTCGTAAAGACATTGACGGGCAAGACAATTACTTTAGAAGTAGAAACTTCAGAT 299953 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | | | | ||| | || || ||||| ||||||||||| ||||| || ||||||||| Sbjct 299952 ATCGTTGCGAATATAAAGAGTAAAATTCAAGACAAAGAAGGCATCCCCCCTGACCAGCAA 299893 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || || || || || |||| | |||| | ||||| ||| | Sbjct 299892 AGACTCATCTTTGCAGGTAAGCAACTTGAGGATGATCATATTCTTTCTGATTACAACATT 299833 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || |||||||| || || ||||| || Sbjct 299832 CAGAAAGAATCGACCCTCCATCTGGT 299807 >seq1253 Length=111296 Score = 98.7 bits (108), Expect = 2e-15 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 178011 CAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTC 178070 |||||||||||||| || || || || || || |||| ||||| || ||||||||| | Sbjct 79324 CAGGACAAAGAAGGGATACCCCCTGATCAACAGAGACTGATCTTTGCTGGAAAACAGTTA 79383 Query 178071 GAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130 |||||||| | ||||| || ||||| ||| | || ||||| || || || || ||||| Sbjct 79384 GAAGATGGGCGAACTCTGGCAGATTACAACATTCAGAAAGAGTCCACTCTTCACCTTGTC 79443 Query 178131 TTGAGACTCAGA 178142 | || |||||| Sbjct 79444 CTAAGGCTCAGA 79455 >seq636 Length=371348 Score = 93.3 bits (102), Expect = 1e-13 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 ||| || || || || ||||| || | |||||||||||||| ||||||||||||||||| Sbjct 143470 AGGGATTCCACCTGATCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAAGATGGAAG 143529 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||||| || ||||||||| |||| |||| Sbjct 143530 AACTCTCGCAGATTATAACATCCAGAAAG 143558 >seq72 Length=558898 Score = 93.3 bits (102), Expect = 1e-13 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 ||| |||||||| ||||||||||| || ||||| || || || ||||| || |||||||| Sbjct 205538 AGGGATCCCTCCCGACCAGCAACGTCTGATCTTTGCTGGGAAGCAGCTTGAGGATGGAAG 205479 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAG 178110 |||||| || ||||||||| | || |||| Sbjct 205478 GACTCTCGCAGATTATAACATACAGAAAG 205450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203696837988232