Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20japonica_20[genbank_20GCA_5F001602275.1_202016-03-15] 11,786 sequences; 334,384,427 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq8 84.2 2e-11 >seq8 Length=5380884 Score = 84.2 bits (92), Expect = 2e-11 Identities = 107/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 19971 TTTATCATT-TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATG 20029 || ||||| |||| |||| | ||||| ||||| || ||||| || |||||||| ||| Sbjct 1717745 TTGATCATAGTTCCACCTCTGAGCCTCAGGACCAAGTGAAGTGTCGACTCTTTTTGAATG 1717804 Query 20030 TTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGT 20089 || ||||| | | ||| | |||||||||||| || || ||| |||| ||||| || Sbjct 1717805 TTATAATCAGCTAATGTTCTTCCATCTTCCAATTGCTTACCAGCAAAAATCAGCCTTTGC 1717864 Query 20090 TGATCGACGGGCACGCCTTCTTTGTC 20115 || || ||| | ||| || ||||| Sbjct 1717865 TGGTCTGGGGGAATGCCCTCCTTGTC 1717890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419526929707866