Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20japonica_20[genbank_20GCA_5F001602275.1_202016-03-15] 11,786 sequences; 334,384,427 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq8 87.8 2e-12 >seq8 Length=5380884 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/144 (75%), Gaps = 3/144 (2%) Strand=Plus/Minus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 ||||| || ||||| || || || || || || ||||||| | || |||||| | ||| Sbjct 1717890 GACAAGGAGGGCATTCCCCCAGACCAGCAAAGGCTGATTTTTGCTGGTAAGCAATTGGAA 1717831 Query 24144 GATGACAGAAACGTCAGC-GATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 |||| |||| | | ||| |||||||||||||||||||| || ||| |||| || || | Sbjct 1717830 GATGGAAGAA-CATTAGCTGATTATAACATTCAAAAAGAGTCGACACTTCACTTGGTCCT 1717772 Query 24203 AAGATTGAGAGGAGG-ACTATAAT 24225 || | ||||| || ||||| || Sbjct 1717771 GAGGCTCAGAGGTGGAACTATGAT 1717748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429874243186830